Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Esp36-201ENSMUST00000172814 1117 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
Col2a1P28481 Esp36-202ENSMUST00000177882 1117 ntAPPRIS P2 TSL 1 (best) BASIC3.97□□□□□ -1.77
Col2a1P28481 Evi2b-201ENSMUST00000179322 1858 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
Col2a1P28481 Scgb2b12-201ENSMUST00000183195 511 ntAPPRIS P1 TSL 2 BASIC3.97□□□□□ -1.77
Col2a1P28481 Gm28959-201ENSMUST00000186713 551 ntTSL 5 BASIC3.97□□□□□ -1.77
Col2a1P28481 Gm19030-201ENSMUST00000194947 552 ntBASIC3.97□□□□□ -1.77
Col2a1P28481 Gm45860-201ENSMUST00000212700 334 ntBASIC3.97□□□□□ -1.77
Col2a1P28481 CT009604.2-201ENSMUST00000225531 377 ntBASIC3.97□□□□□ -1.77
Col2a1P28481 Gm5168-201ENSMUST00000089165 824 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
Col2a1P28481 Olfr988-201ENSMUST00000099928 1076 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
Col2a1P28481 Olfr142-202ENSMUST00000213968 3630 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.77
Col2a1P28481 Vmn2r-ps40-201ENSMUST00000174438 2558 ntBASIC3.96□□□□□ -1.77
Col2a1P28481 Vmn1r71-205ENSMUST00000227940 4725 ntAPPRIS P2 BASIC3.96□□□□□ -1.78
Col2a1P28481 Jmjd1c-206ENSMUST00000173689 8609 ntAPPRIS ALT2 TSL 2 BASIC3.96□□□□□ -1.78
Col2a1P28481 AC154634.4-201ENSMUST00000226077 2665 ntBASIC3.96□□□□□ -1.78
Col2a1P28481 Olfr1235-ps1-201ENSMUST00000117898 314 ntBASIC3.96□□□□□ -1.78
Col2a1P28481 Gm15231-201ENSMUST00000119174 447 ntBASIC3.96□□□□□ -1.78
Col2a1P28481 Gm15190-201ENSMUST00000120855 276 ntBASIC3.96□□□□□ -1.78
Col2a1P28481 Gm14649-201ENSMUST00000121814 324 ntBASIC3.96□□□□□ -1.78
Col2a1P28481 Gm22956-201ENSMUST00000122520 80 ntBASIC3.96□□□□□ -1.78
Col2a1P28481 Gm27374-201ENSMUST00000183660 81 ntBASIC3.96□□□□□ -1.78
Col2a1P28481 Gm4035-201ENSMUST00000189445 399 ntTSL 3 BASIC3.96□□□□□ -1.78
Col2a1P28481 Gm38217-201ENSMUST00000194358 910 ntBASIC3.96□□□□□ -1.78
Col2a1P28481 Gm42758-201ENSMUST00000202146 283 ntBASIC3.96□□□□□ -1.78
Col2a1P28481 Olfr490-202ENSMUST00000211345 1275 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
Col2a1P28481 AC121569.2-201ENSMUST00000222557 574 ntTSL 2 BASIC3.96□□□□□ -1.78
Col2a1P28481 AC162934.1-201ENSMUST00000222880 309 ntBASIC3.96□□□□□ -1.78
Col2a1P28481 Olfr779-201ENSMUST00000069063 390 ntAPPRIS ALT2 BASIC3.96□□□□□ -1.78
Col2a1P28481 Olfr1196-203ENSMUST00000216977 4225 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
Col2a1P28481 Olfr661-202ENSMUST00000214876 3790 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
Col2a1P28481 Gm42534-201ENSMUST00000196063 1754 ntBASIC3.96□□□□□ -1.78
Col2a1P28481 Gm34549-201ENSMUST00000207057 1611 ntTSL 5 BASIC3.95□□□□□ -1.78
Col2a1P28481 Sucnr1-201ENSMUST00000029326 1571 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
Col2a1P28481 Ccr2-201ENSMUST00000055918 2999 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
Col2a1P28481 Erbb4-201ENSMUST00000119142 11782 ntAPPRIS ALT1 TSL 5 BASIC3.95□□□□□ -1.78
Col2a1P28481 Skint10-201ENSMUST00000060327 1376 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
Col2a1P28481 Ogt-201ENSMUST00000044475 5384 ntAPPRIS P3 TSL 1 (best) BASIC3.95□□□□□ -1.78
Col2a1P28481 Gm44164-201ENSMUST00000203605 2561 ntBASIC3.95□□□□□ -1.78
Col2a1P28481 Gm12082-201ENSMUST00000138164 600 ntTSL 3 BASIC3.95□□□□□ -1.78
Col2a1P28481 Gm12505-201ENSMUST00000146041 757 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
Col2a1P28481 Gm24914-201ENSMUST00000157285 313 ntBASIC3.95□□□□□ -1.78
Col2a1P28481 Gm23028-201ENSMUST00000158773 265 ntBASIC3.95□□□□□ -1.78
Col2a1P28481 Gm26871-205ENSMUST00000181926 742 ntTSL 3 BASIC3.95□□□□□ -1.78
Col2a1P28481 Gm27468-201ENSMUST00000183577 106 ntBASIC3.95□□□□□ -1.78
Col2a1P28481 Gm37085-201ENSMUST00000193780 196 ntBASIC3.95□□□□□ -1.78
Col2a1P28481 Pip-202ENSMUST00000203244 736 ntTSL 3 BASIC3.95□□□□□ -1.78
Col2a1P28481 Gm18644-201ENSMUST00000211458 815 ntBASIC3.95□□□□□ -1.78
Col2a1P28481 CT030161.1-201ENSMUST00000218411 124 ntBASIC3.95□□□□□ -1.78
Col2a1P28481 1700024I08Rik-203ENSMUST00000222372 754 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
Col2a1P28481 Lrrc69-201ENSMUST00000023917 1242 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
Col2a1P28481 Skint2-201ENSMUST00000058791 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
Col2a1P28481 Vdac3-ps1-201ENSMUST00000099736 853 ntBASIC3.95□□□□□ -1.78
Col2a1P28481 Zfp990-201ENSMUST00000105741 3044 ntAPPRIS P1 TSL 3 BASIC3.95□□□□□ -1.78
Col2a1P28481 Nexn-212ENSMUST00000199470 2392 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
Col2a1P28481 Gm43829-201ENSMUST00000196191 3802 ntBASIC3.95□□□□□ -1.78
Col2a1P28481 Gm38069-201ENSMUST00000195360 2144 ntBASIC3.95□□□□□ -1.78
Col2a1P28481 Vmn2r78-201ENSMUST00000170835 2611 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
Col2a1P28481 Olfr901-202ENSMUST00000216502 2639 ntAPPRIS P1 TSL 3 BASIC3.95□□□□□ -1.78
Col2a1P28481 Gm3259-201ENSMUST00000101015 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.95□□□□□ -1.78
Col2a1P28481 1700049E17Rik1-201ENSMUST00000095985 1761 ntAPPRIS P1 TSL 2 BASIC3.94□□□□□ -1.78
Col2a1P28481 Olfr644-203ENSMUST00000213991 3506 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
Col2a1P28481 Gm12805-201ENSMUST00000117305 1048 ntBASIC3.94□□□□□ -1.78
Col2a1P28481 Klrd1-203ENSMUST00000119520 919 ntAPPRIS ALT2 TSL 5 BASIC3.94□□□□□ -1.78
Col2a1P28481 Gm4207-201ENSMUST00000173144 960 ntBASIC3.94□□□□□ -1.78
Col2a1P28481 Gm44370-201ENSMUST00000175436 112 ntBASIC3.94□□□□□ -1.78
Col2a1P28481 Mir7k-201ENSMUST00000184115 110 ntBASIC3.94□□□□□ -1.78
Col2a1P28481 Mir7118-201ENSMUST00000197760 61 ntBASIC3.94□□□□□ -1.78
Col2a1P28481 Gm44320-201ENSMUST00000199276 86 ntBASIC3.94□□□□□ -1.78
Col2a1P28481 Gm43371-201ENSMUST00000202838 1031 ntBASIC3.94□□□□□ -1.78
Col2a1P28481 Gm43899-201ENSMUST00000203675 246 ntBASIC3.94□□□□□ -1.78
Col2a1P28481 AC158631.2-201ENSMUST00000219999 478 ntBASIC3.94□□□□□ -1.78
Col2a1P28481 Gm36525-201ENSMUST00000222590 638 ntTSL 5 BASIC3.94□□□□□ -1.78
Col2a1P28481 AC167669.1-201ENSMUST00000224932 384 ntBASIC3.94□□□□□ -1.78
Col2a1P28481 AC166369.3-201ENSMUST00000227286 409 ntBASIC3.94□□□□□ -1.78
Col2a1P28481 Olfr308-201ENSMUST00000044256 1056 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
Col2a1P28481 Vmn1r89-201ENSMUST00000053008 951 ntAPPRIS P2 BASIC3.94□□□□□ -1.78
Col2a1P28481 Gm6195-201ENSMUST00000063059 357 ntBASIC3.94□□□□□ -1.78
Col2a1P28481 Klra6-201ENSMUST00000074056 1116 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
Col2a1P28481 Olfr502-202ENSMUST00000216919 3282 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
Col2a1P28481 Ifi213-202ENSMUST00000150649 2748 ntAPPRIS ALT2 TSL 5 BASIC3.94□□□□□ -1.78
Col2a1P28481 Olfr1265-202ENSMUST00000214855 5701 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
Col2a1P28481 Enam-202ENSMUST00000199104 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
Col2a1P28481 Slc22a30-201ENSMUST00000064507 1888 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
Col2a1P28481 Olfr112-201ENSMUST00000085548 3103 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
Col2a1P28481 Gm36944-201ENSMUST00000192257 2759 ntBASIC3.94□□□□□ -1.78
Col2a1P28481 Olfr905-202ENSMUST00000214377 4429 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
Col2a1P28481 Pak3-204ENSMUST00000112865 8484 ntAPPRIS P3 TSL 5 BASIC3.94□□□□□ -1.78
Col2a1P28481 Fam169a-202ENSMUST00000169863 6013 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
Col2a1P28481 Gm28710-202ENSMUST00000211738 2987 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
Col2a1P28481 Arhgef6-202ENSMUST00000114735 1614 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
Col2a1P28481 Igkv4-57-201ENSMUST00000103357 352 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
Col2a1P28481 Trav8n-2-201ENSMUST00000103632 408 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
Col2a1P28481 4933400A11Rik-203ENSMUST00000112102 1101 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
Col2a1P28481 Ccnb2-ps-201ENSMUST00000118290 623 ntBASIC3.93□□□□□ -1.78
Col2a1P28481 Gm14791-201ENSMUST00000119061 1166 ntBASIC3.93□□□□□ -1.78
Col2a1P28481 Gm23671-201ENSMUST00000157472 103 ntBASIC3.93□□□□□ -1.78
Col2a1P28481 Ear-ps10-201ENSMUST00000161871 460 ntBASIC3.93□□□□□ -1.78
Col2a1P28481 Gm22852-201ENSMUST00000177899 101 ntBASIC3.93□□□□□ -1.78
Col2a1P28481 Gm7656-201ENSMUST00000182468 1004 ntBASIC3.93□□□□□ -1.78
Col2a1P28481 Gm19104-201ENSMUST00000198392 679 ntBASIC3.93□□□□□ -1.78
Retrieved 100 of 76,532 protein–RNA pairs in 85.1 ms