Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Gm14119-201ENSMUST00000119511 235 ntBASIC3.19□□□□□ -1.9
Sdc1P18828 Gm13273-201ENSMUST00000119737 159 ntBASIC3.19□□□□□ -1.9
Sdc1P18828 Olfr1050-ps1-201ENSMUST00000119802 947 ntBASIC3.19□□□□□ -1.9
Sdc1P18828 Gm11746-201ENSMUST00000119843 821 ntBASIC3.19□□□□□ -1.9
Sdc1P18828 Gm10444-201ENSMUST00000126708 148 ntBASIC3.19□□□□□ -1.9
Sdc1P18828 8030453O22Rik-201ENSMUST00000128919 370 ntTSL 3 BASIC3.19□□□□□ -1.9
Sdc1P18828 Bloc1s1-202ENSMUST00000131271 475 ntTSL 5 BASIC3.19□□□□□ -1.9
Sdc1P18828 Zfp968-203ENSMUST00000131676 1272 ntAPPRIS P1 TSL 2 BASIC3.19□□□□□ -1.9
Sdc1P18828 Gm11351-201ENSMUST00000139335 583 ntTSL 2 BASIC3.19□□□□□ -1.9
Sdc1P18828 Gm23123-201ENSMUST00000157648 144 ntBASIC3.19□□□□□ -1.9
Sdc1P18828 Gm24727-201ENSMUST00000158231 144 ntBASIC3.19□□□□□ -1.9
Sdc1P18828 Gm24875-201ENSMUST00000158888 104 ntBASIC3.19□□□□□ -1.9
Sdc1P18828 Gm24976-201ENSMUST00000158972 135 ntBASIC3.19□□□□□ -1.9
Sdc1P18828 Gm17044-201ENSMUST00000168549 828 ntBASIC3.19□□□□□ -1.9
Sdc1P18828 Ctla2b-202ENSMUST00000171347 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
Sdc1P18828 Gm20417-201ENSMUST00000174784 425 ntTSL 5 BASIC3.19□□□□□ -1.9
Sdc1P18828 Gm24811-201ENSMUST00000175313 100 ntBASIC3.19□□□□□ -1.9
Sdc1P18828 Gm5527-201ENSMUST00000179821 642 ntBASIC3.19□□□□□ -1.9
Sdc1P18828 2610044O15Rik8-203ENSMUST00000188757 413 ntTSL 2 BASIC3.19□□□□□ -1.9
Sdc1P18828 Gm28654-201ENSMUST00000189801 379 ntBASIC3.19□□□□□ -1.9
Sdc1P18828 Gm29524-201ENSMUST00000190819 699 ntBASIC3.19□□□□□ -1.9
Sdc1P18828 Gm36467-202ENSMUST00000195606 622 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
Sdc1P18828 Gm18340-201ENSMUST00000196342 609 ntBASIC3.19□□□□□ -1.9
Sdc1P18828 Gm44300-201ENSMUST00000196792 121 ntBASIC3.19□□□□□ -1.9
Sdc1P18828 Gm4734-201ENSMUST00000200117 777 ntBASIC3.19□□□□□ -1.9
Sdc1P18828 Gm18855-201ENSMUST00000206689 570 ntBASIC3.19□□□□□ -1.9
Sdc1P18828 Olfr1142-ps1-201ENSMUST00000213624 805 ntBASIC3.19□□□□□ -1.9
Sdc1P18828 Olfr125-202ENSMUST00000213857 3835 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Sdc1P18828 Gm35865-201ENSMUST00000220180 287 ntTSL 3 BASIC3.19□□□□□ -1.9
Sdc1P18828 AC122924.1-201ENSMUST00000222044 163 ntBASIC3.19□□□□□ -1.9
Sdc1P18828 Scrg1-201ENSMUST00000034023 700 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
Sdc1P18828 Iapp-201ENSMUST00000041993 839 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
Sdc1P18828 Olfr788-201ENSMUST00000056961 936 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Sdc1P18828 Prl7a1-201ENSMUST00000006659 940 ntAPPRIS P3 TSL 1 (best) BASIC3.19□□□□□ -1.9
Sdc1P18828 Olfr749-201ENSMUST00000074674 1016 ntAPPRIS P1 TSL 3 BASIC3.19□□□□□ -1.9
Sdc1P18828 Vmn2r125-201ENSMUST00000096794 1110 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Sdc1P18828 Vmn2r91-201ENSMUST00000172359 2571 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Sdc1P18828 Gm35835-202ENSMUST00000216984 3350 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
Sdc1P18828 9530051G07Rik-201ENSMUST00000127673 4414 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
Sdc1P18828 Phex-201ENSMUST00000079945 6265 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
Sdc1P18828 Gm20619-201ENSMUST00000175814 2008 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
Sdc1P18828 2900092N22Rik-201ENSMUST00000193601 1409 ntBASIC3.19□□□□□ -1.9
Sdc1P18828 Strbp-201ENSMUST00000028279 16348 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Sdc1P18828 Olfr1009-203ENSMUST00000216443 4047 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Sdc1P18828 AC153887.2-201ENSMUST00000219160 3838 ntBASIC3.18□□□□□ -1.9
Sdc1P18828 Sacs-203ENSMUST00000119943 14991 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
Sdc1P18828 A430106G13Rik-201ENSMUST00000182158 3388 ntBASIC3.18□□□□□ -1.9
Sdc1P18828 Trdv5-201ENSMUST00000103685 438 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
Sdc1P18828 Gm15297-201ENSMUST00000117795 290 ntBASIC3.18□□□□□ -1.9
Sdc1P18828 Gm13122-201ENSMUST00000118380 453 ntBASIC3.18□□□□□ -1.9
Sdc1P18828 Gm15265-201ENSMUST00000133494 551 ntTSL 2 BASIC3.18□□□□□ -1.9
Sdc1P18828 4930577H14Rik-201ENSMUST00000151367 790 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
Sdc1P18828 Gm3531-201ENSMUST00000162698 489 ntBASIC3.18□□□□□ -1.9
Sdc1P18828 Gm8362-202ENSMUST00000170673 997 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
Sdc1P18828 Mir6921-201ENSMUST00000183719 80 ntBASIC3.18□□□□□ -1.9
Sdc1P18828 1500004A13Rik-206ENSMUST00000184170 576 ntTSL 3 BASIC3.18□□□□□ -1.9
Sdc1P18828 Mir7674-201ENSMUST00000184964 63 ntBASIC3.18□□□□□ -1.9
Sdc1P18828 4930554C24Rik-201ENSMUST00000187735 1084 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
Sdc1P18828 Gm37093-201ENSMUST00000192515 407 ntTSL 5 BASIC3.18□□□□□ -1.9
Sdc1P18828 Kcnmb2-206ENSMUST00000194796 338 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
Sdc1P18828 Gm18036-201ENSMUST00000195256 272 ntBASIC3.18□□□□□ -1.9
Sdc1P18828 1700052H01Rik-202ENSMUST00000196973 429 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
Sdc1P18828 5430434I15Rik-201ENSMUST00000197658 1257 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
Sdc1P18828 Gm42695-201ENSMUST00000199445 818 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
Sdc1P18828 Gm42474-201ENSMUST00000201073 505 ntBASIC3.18□□□□□ -1.9
Sdc1P18828 2200007N16Rik-201ENSMUST00000206367 238 ntBASIC3.18□□□□□ -1.9
Sdc1P18828 Gm18016-201ENSMUST00000216119 801 ntBASIC3.18□□□□□ -1.9
Sdc1P18828 Gm17917-201ENSMUST00000218561 953 ntBASIC3.18□□□□□ -1.9
Sdc1P18828 Gm7034-201ENSMUST00000218638 645 ntBASIC3.18□□□□□ -1.9
Sdc1P18828 Gm30034-201ENSMUST00000219589 248 ntTSL 5 BASIC3.18□□□□□ -1.9
Sdc1P18828 AC158388.1-201ENSMUST00000225441 256 ntBASIC3.18□□□□□ -1.9
Sdc1P18828 AC124400.1-201ENSMUST00000225779 193 ntBASIC3.18□□□□□ -1.9
Sdc1P18828 AC112142.1-206ENSMUST00000228136 982 ntBASIC3.18□□□□□ -1.9
Sdc1P18828 AC157772.2-201ENSMUST00000228202 259 ntBASIC3.18□□□□□ -1.9
Sdc1P18828 Acbd7-202ENSMUST00000228935 534 ntAPPRIS ALT1 BASIC3.18□□□□□ -1.9
Sdc1P18828 C2cd6b-201ENSMUST00000054653 878 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
Sdc1P18828 Apoo-ps-201ENSMUST00000061241 586 ntBASIC3.18□□□□□ -1.9
Sdc1P18828 Vmn1r214-201ENSMUST00000074252 1227 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
Sdc1P18828 Olfr782-201ENSMUST00000077024 945 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
Sdc1P18828 Olfr727-201ENSMUST00000079142 1035 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
Sdc1P18828 Olfr105-ps-202ENSMUST00000215518 3778 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Sdc1P18828 Gm11251-201ENSMUST00000119593 2800 ntBASIC3.18□□□□□ -1.9
Sdc1P18828 Olfr681-204ENSMUST00000215564 4487 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Sdc1P18828 Rbm31y-201ENSMUST00000179408 1955 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
Sdc1P18828 Gm21379-201ENSMUST00000179772 1955 ntBASIC3.18□□□□□ -1.9
Sdc1P18828 Vmn1r21-202ENSMUST00000203488 1673 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
Sdc1P18828 A630033H20Rik-205ENSMUST00000167673 3044 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
Sdc1P18828 Muc15-202ENSMUST00000111016 3421 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
Sdc1P18828 Olfr131-202ENSMUST00000172933 1358 ntAPPRIS P1 TSL 3 BASIC3.17□□□□□ -1.9
Sdc1P18828 Gm37965-201ENSMUST00000195304 1362 ntBASIC3.17□□□□□ -1.9
Sdc1P18828 Gm25096-201ENSMUST00000104043 129 ntBASIC3.17□□□□□ -1.9
Sdc1P18828 Gm26273-201ENSMUST00000104180 131 ntBASIC3.17□□□□□ -1.9
Sdc1P18828 Gm15126-201ENSMUST00000118631 833 ntBASIC3.17□□□□□ -1.9
Sdc1P18828 Gm14607-201ENSMUST00000119119 491 ntBASIC3.17□□□□□ -1.9
Sdc1P18828 Gm11881-201ENSMUST00000119408 572 ntBASIC3.17□□□□□ -1.9
Sdc1P18828 Gm11830-201ENSMUST00000120175 561 ntBASIC3.17□□□□□ -1.9
Sdc1P18828 Gm14908-201ENSMUST00000120930 1286 ntBASIC3.17□□□□□ -1.9
Sdc1P18828 Gm13618-201ENSMUST00000128859 384 ntTSL 5 BASIC3.17□□□□□ -1.9
Sdc1P18828 Gm11479-201ENSMUST00000134275 387 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
Sdc1P18828 Gm23546-201ENSMUST00000158211 137 ntBASIC3.17□□□□□ -1.9
Retrieved 100 of 76,532 protein–RNA pairs in 111 ms