Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Traj7-201ENSMUST00000103733 59 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Pcdh1F7BJK1 Gm13672-201ENSMUST00000117554 459 ntBASIC4.79□□□□□ -1.64
Pcdh1F7BJK1 Olfr343-ps1-201ENSMUST00000121883 303 ntBASIC4.79□□□□□ -1.64
Pcdh1F7BJK1 Gm11418-201ENSMUST00000156193 626 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Pcdh1F7BJK1 Gm24687-201ENSMUST00000157758 241 ntBASIC4.79□□□□□ -1.64
Pcdh1F7BJK1 Gm24419-201ENSMUST00000157875 332 ntBASIC4.79□□□□□ -1.64
Pcdh1F7BJK1 Gm24965-201ENSMUST00000157922 106 ntBASIC4.79□□□□□ -1.64
Pcdh1F7BJK1 Gm24731-201ENSMUST00000158227 131 ntBASIC4.79□□□□□ -1.64
Pcdh1F7BJK1 Isx-202ENSMUST00000174427 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
Pcdh1F7BJK1 Gm25246-201ENSMUST00000175476 69 ntBASIC4.79□□□□□ -1.64
Pcdh1F7BJK1 Gm22716-201ENSMUST00000177596 107 ntBASIC4.79□□□□□ -1.64
Pcdh1F7BJK1 Gm23144-201ENSMUST00000180226 107 ntBASIC4.79□□□□□ -1.64
Pcdh1F7BJK1 Gm29423-207ENSMUST00000189580 255 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
Pcdh1F7BJK1 Gm37892-201ENSMUST00000192018 437 ntTSL 3 BASIC4.79□□□□□ -1.64
Pcdh1F7BJK1 Gm43652-201ENSMUST00000196219 675 ntBASIC4.79□□□□□ -1.64
Pcdh1F7BJK1 Gm43078-201ENSMUST00000197222 168 ntBASIC4.79□□□□□ -1.64
Pcdh1F7BJK1 Gm43631-201ENSMUST00000202011 369 ntBASIC4.79□□□□□ -1.64
Pcdh1F7BJK1 Tprkb-214ENSMUST00000202803 716 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Pcdh1F7BJK1 Gm44266-201ENSMUST00000205235 500 ntBASIC4.79□□□□□ -1.64
Pcdh1F7BJK1 Gm45004-201ENSMUST00000205302 465 ntTSL 2 BASIC4.79□□□□□ -1.64
Pcdh1F7BJK1 Spcs2-202ENSMUST00000207063 727 ntTSL 2 BASIC4.79□□□□□ -1.64
Pcdh1F7BJK1 A530021J07Rik-203ENSMUST00000208111 308 ntTSL 2 BASIC4.79□□□□□ -1.64
Pcdh1F7BJK1 Gm34096-201ENSMUST00000211296 530 ntTSL 3 BASIC4.79□□□□□ -1.64
Pcdh1F7BJK1 Gm4510-201ENSMUST00000218265 427 ntBASIC4.79□□□□□ -1.64
Pcdh1F7BJK1 AC132384.5-201ENSMUST00000218562 226 ntBASIC4.79□□□□□ -1.64
Pcdh1F7BJK1 AC116589.7-201ENSMUST00000221061 239 ntBASIC4.79□□□□□ -1.64
Pcdh1F7BJK1 AC164117.1-201ENSMUST00000221726 239 ntBASIC4.79□□□□□ -1.64
Pcdh1F7BJK1 Gm30198-201ENSMUST00000222873 824 ntTSL 2 BASIC4.79□□□□□ -1.64
Pcdh1F7BJK1 Clec2j-201ENSMUST00000032517 515 ntBASIC4.79□□□□□ -1.64
Pcdh1F7BJK1 Olfr835-201ENSMUST00000059315 936 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Pcdh1F7BJK1 Olfr138-201ENSMUST00000071871 939 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Pcdh1F7BJK1 Gm23939-201ENSMUST00000082880 133 ntBASIC4.79□□□□□ -1.64
Pcdh1F7BJK1 Gm23460-201ENSMUST00000083258 109 ntBASIC4.79□□□□□ -1.64
Pcdh1F7BJK1 Gm25126-201ENSMUST00000083343 102 ntBASIC4.79□□□□□ -1.64
Pcdh1F7BJK1 mt-Nd4l-201ENSMUST00000084013 297 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Pcdh1F7BJK1 Gm5168-201ENSMUST00000089165 824 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Pcdh1F7BJK1 Olfr510-203ENSMUST00000216331 3101 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Pcdh1F7BJK1 Zfhx4-205ENSMUST00000176383 13500 ntAPPRIS P2 TSL 5 BASIC4.79□□□□□ -1.64
Pcdh1F7BJK1 Fam122b-202ENSMUST00000114838 3536 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
Pcdh1F7BJK1 Cpb2-201ENSMUST00000022576 1477 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Pcdh1F7BJK1 Zfp644-203ENSMUST00000112695 1915 ntTSL 5 BASIC4.79□□□□□ -1.64
Pcdh1F7BJK1 Gm26764-201ENSMUST00000181175 2596 ntTSL 5 BASIC4.79□□□□□ -1.64
Pcdh1F7BJK1 Nptn-205ENSMUST00000176250 4531 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Pcdh1F7BJK1 Igsf10-202ENSMUST00000193455 8484 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Pcdh1F7BJK1 Pi15-201ENSMUST00000088476 6923 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Pcdh1F7BJK1 AC123705.3-201ENSMUST00000223531 2069 ntBASIC4.79□□□□□ -1.64
Pcdh1F7BJK1 Ccr2-204ENSMUST00000171719 2265 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Pcdh1F7BJK1 Capn6-201ENSMUST00000087316 3561 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Pcdh1F7BJK1 Fam83b-201ENSMUST00000098546 3136 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Pcdh1F7BJK1 5430403G16Rik-201ENSMUST00000092720 3341 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Pcdh1F7BJK1 Dctn4-201ENSMUST00000025505 3738 ntAPPRIS P2 TSL 1 (best) BASIC4.79□□□□□ -1.64
Pcdh1F7BJK1 Smc5-206ENSMUST00000226111 3265 ntBASIC4.78□□□□□ -1.64
Pcdh1F7BJK1 Gm38065-201ENSMUST00000193147 3492 ntBASIC4.78□□□□□ -1.64
Pcdh1F7BJK1 Atp1b4-202ENSMUST00000115134 4189 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Pcdh1F7BJK1 Zfp995-201ENSMUST00000106026 1744 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Pcdh1F7BJK1 Olfr1355-201ENSMUST00000078414 3317 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
Pcdh1F7BJK1 Cbx5-202ENSMUST00000118152 8803 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Pcdh1F7BJK1 AC154227.1-201ENSMUST00000228809 2467 ntBASIC4.78□□□□□ -1.64
Pcdh1F7BJK1 Gm5444-201ENSMUST00000065956 2468 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Pcdh1F7BJK1 Gm19666-201ENSMUST00000198176 1893 ntBASIC4.78□□□□□ -1.64
Pcdh1F7BJK1 Zfp353-ps-201ENSMUST00000107130 1650 ntBASIC4.78□□□□□ -1.64
Pcdh1F7BJK1 Gm18432-201ENSMUST00000195568 1451 ntBASIC4.78□□□□□ -1.64
Pcdh1F7BJK1 Gm13475-201ENSMUST00000119290 234 ntBASIC4.78□□□□□ -1.64
Pcdh1F7BJK1 Gm16017-201ENSMUST00000119834 208 ntBASIC4.78□□□□□ -1.64
Pcdh1F7BJK1 Eif1-ps3-201ENSMUST00000121450 342 ntBASIC4.78□□□□□ -1.64
Pcdh1F7BJK1 n-R5s21-201ENSMUST00000122692 117 ntBASIC4.78□□□□□ -1.64
Pcdh1F7BJK1 Gm22804-201ENSMUST00000158052 101 ntBASIC4.78□□□□□ -1.64
Pcdh1F7BJK1 Gm23542-201ENSMUST00000158208 96 ntBASIC4.78□□□□□ -1.64
Pcdh1F7BJK1 Rpl30-ps6-201ENSMUST00000163337 348 ntBASIC4.78□□□□□ -1.64
Pcdh1F7BJK1 Vmn1r-ps64-201ENSMUST00000173746 655 ntBASIC4.78□□□□□ -1.64
Pcdh1F7BJK1 9230113P08Rik-202ENSMUST00000176153 414 ntAPPRIS P5 TSL 5 BASIC4.78□□□□□ -1.64
Pcdh1F7BJK1 Gm23977-201ENSMUST00000177871 74 ntBASIC4.78□□□□□ -1.64
Pcdh1F7BJK1 Gm8532-201ENSMUST00000179174 461 ntBASIC4.78□□□□□ -1.64
Pcdh1F7BJK1 1700101I11Rik-201ENSMUST00000181594 896 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Pcdh1F7BJK1 Gm20619-205ENSMUST00000181633 581 ntTSL 2 BASIC4.78□□□□□ -1.64
Pcdh1F7BJK1 Gm27460-201ENSMUST00000184213 100 ntBASIC4.78□□□□□ -1.64
Pcdh1F7BJK1 Mir7072-201ENSMUST00000184542 60 ntBASIC4.78□□□□□ -1.64
Pcdh1F7BJK1 Rpl23a-ps10-201ENSMUST00000185511 462 ntBASIC4.78□□□□□ -1.64
Pcdh1F7BJK1 Gm28625-201ENSMUST00000188309 205 ntBASIC4.78□□□□□ -1.64
Pcdh1F7BJK1 Gm37609-201ENSMUST00000191778 678 ntBASIC4.78□□□□□ -1.64
Pcdh1F7BJK1 A830029E22Rik-201ENSMUST00000193672 1194 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Pcdh1F7BJK1 Mirlet7e-201ENSMUST00000196737 93 ntBASIC4.78□□□□□ -1.64
Pcdh1F7BJK1 7330423F06Rik-201ENSMUST00000197499 301 ntBASIC4.78□□□□□ -1.64
Pcdh1F7BJK1 Gm18011-201ENSMUST00000203717 565 ntBASIC4.78□□□□□ -1.64
Pcdh1F7BJK1 Gm8319-201ENSMUST00000205708 641 ntBASIC4.78□□□□□ -1.64
Pcdh1F7BJK1 Gm44927-201ENSMUST00000207573 716 ntBASIC4.78□□□□□ -1.64
Pcdh1F7BJK1 Gm10988-201ENSMUST00000209150 1088 ntBASIC4.78□□□□□ -1.64
Pcdh1F7BJK1 Gm45422-201ENSMUST00000211476 246 ntBASIC4.78□□□□□ -1.64
Pcdh1F7BJK1 Gm45402-201ENSMUST00000211796 223 ntBASIC4.78□□□□□ -1.64
Pcdh1F7BJK1 Gm45710-201ENSMUST00000212847 215 ntBASIC4.78□□□□□ -1.64
Pcdh1F7BJK1 Gm2829-201ENSMUST00000213121 499 ntBASIC4.78□□□□□ -1.64
Pcdh1F7BJK1 Gm10709-201ENSMUST00000213318 480 ntBASIC4.78□□□□□ -1.64
Pcdh1F7BJK1 Olfr1041-ps1-201ENSMUST00000215884 271 ntBASIC4.78□□□□□ -1.64
Pcdh1F7BJK1 Rpl26-ps6-201ENSMUST00000216693 434 ntBASIC4.78□□□□□ -1.64
Pcdh1F7BJK1 CT010455.1-201ENSMUST00000218579 413 ntBASIC4.78□□□□□ -1.64
Pcdh1F7BJK1 Gm31931-201ENSMUST00000219666 222 ntBASIC4.78□□□□□ -1.64
Pcdh1F7BJK1 AC156559.1-201ENSMUST00000224158 222 ntBASIC4.78□□□□□ -1.64
Pcdh1F7BJK1 CT010486.1-201ENSMUST00000224609 422 ntBASIC4.78□□□□□ -1.64
Pcdh1F7BJK1 AC154657.1-201ENSMUST00000226394 775 ntBASIC4.78□□□□□ -1.64
Pcdh1F7BJK1 AC124408.2-201ENSMUST00000228168 645 ntBASIC4.78□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 81.2 ms