Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Vmn1r-ps74-201ENSMUST00000173518 570 ntBASIC3.41□□□□□ -1.86
Col6a3E9PWQ3 Stk-ps2-204ENSMUST00000187808 616 ntBASIC3.41□□□□□ -1.86
Col6a3E9PWQ3 n-TSaga9-201ENSMUST00000197675 107 ntBASIC3.41□□□□□ -1.86
Col6a3E9PWQ3 Gm18327-201ENSMUST00000202426 830 ntBASIC3.41□□□□□ -1.86
Col6a3E9PWQ3 AC145736.1-201ENSMUST00000214661 479 ntBASIC3.41□□□□□ -1.86
Col6a3E9PWQ3 Gm5176-202ENSMUST00000220267 583 ntBASIC3.41□□□□□ -1.86
Col6a3E9PWQ3 Gm28044-201ENSMUST00000044819 551 ntAPPRIS P1 TSL 3 BASIC3.41□□□□□ -1.86
Col6a3E9PWQ3 Myo1b-204ENSMUST00000114541 4616 ntTSL 5 BASIC3.41□□□□□ -1.86
Col6a3E9PWQ3 Olfr1270-203ENSMUST00000215578 4982 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
Col6a3E9PWQ3 Cdk14-203ENSMUST00000115451 5145 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.86
Col6a3E9PWQ3 Frmpd3-201ENSMUST00000044702 3141 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
Col6a3E9PWQ3 Tlr4-201ENSMUST00000048096 4077 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
Col6a3E9PWQ3 Gm15127-203ENSMUST00000112753 1950 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.86
Col6a3E9PWQ3 Gm15361-201ENSMUST00000119320 444 ntBASIC3.4□□□□□ -1.86
Col6a3E9PWQ3 Gm15643-201ENSMUST00000126556 383 ntTSL 3 BASIC3.4□□□□□ -1.86
Col6a3E9PWQ3 AC163631.1-201ENSMUST00000225041 598 ntBASIC3.4□□□□□ -1.86
Col6a3E9PWQ3 CT025548.1-201ENSMUST00000227459 257 ntBASIC3.4□□□□□ -1.86
Col6a3E9PWQ3 Ankrd17-205ENSMUST00000197021 8067 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.86
Col6a3E9PWQ3 Gm14387-201ENSMUST00000121827 2055 ntBASIC3.4□□□□□ -1.86
Col6a3E9PWQ3 Olfr824-203ENSMUST00000215217 3619 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.86
Col6a3E9PWQ3 Gm45854-201ENSMUST00000211857 3488 ntBASIC3.4□□□□□ -1.87
Col6a3E9PWQ3 Trbv13-1-201ENSMUST00000103268 334 ntAPPRIS ALT2 BASIC3.4□□□□□ -1.87
Col6a3E9PWQ3 Scgb2b21-201ENSMUST00000185407 520 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
Col6a3E9PWQ3 Gm42621-201ENSMUST00000198114 275 ntBASIC3.4□□□□□ -1.87
Col6a3E9PWQ3 Tpbpb-201ENSMUST00000080766 850 ntAPPRIS P2 TSL 1 (best) BASIC3.4□□□□□ -1.87
Col6a3E9PWQ3 AC147615.2-201ENSMUST00000219876 2154 ntBASIC3.4□□□□□ -1.87
Col6a3E9PWQ3 Zfp119b-202ENSMUST00000189452 2078 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
Col6a3E9PWQ3 Pola1-201ENSMUST00000006856 5346 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
Col6a3E9PWQ3 Cyp4b1-ps1-201ENSMUST00000118753 315 ntBASIC3.39□□□□□ -1.87
Col6a3E9PWQ3 Gm25863-201ENSMUST00000158249 329 ntBASIC3.39□□□□□ -1.87
Col6a3E9PWQ3 Rpl48-ps1-201ENSMUST00000177147 556 ntBASIC3.39□□□□□ -1.87
Col6a3E9PWQ3 Gm19620-201ENSMUST00000195972 434 ntBASIC3.39□□□□□ -1.87
Col6a3E9PWQ3 Mir202-201ENSMUST00000083568 72 ntBASIC3.39□□□□□ -1.87
Col6a3E9PWQ3 Vmn1r5-203ENSMUST00000228276 3188 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
Col6a3E9PWQ3 Olfr1175-ps-201ENSMUST00000214207 5552 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Col6a3E9PWQ3 Gm37626-201ENSMUST00000194332 4563 ntBASIC3.39□□□□□ -1.87
Col6a3E9PWQ3 Olfr733-203ENSMUST00000214756 3640 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Col6a3E9PWQ3 Gm32693-201ENSMUST00000196538 2402 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
Col6a3E9PWQ3 Gm22149-201ENSMUST00000104442 136 ntBASIC3.39□□□□□ -1.87
Col6a3E9PWQ3 Gm26247-201ENSMUST00000116702 91 ntBASIC3.39□□□□□ -1.87
Col6a3E9PWQ3 Gm13717-201ENSMUST00000119868 365 ntBASIC3.39□□□□□ -1.87
Col6a3E9PWQ3 Amy2a1-201ENSMUST00000132353 890 ntAPPRIS P1 TSL 2 BASIC3.39□□□□□ -1.87
Col6a3E9PWQ3 Gm13330-201ENSMUST00000136400 388 ntTSL 5 BASIC3.39□□□□□ -1.87
Col6a3E9PWQ3 2210414B05Rik-201ENSMUST00000139600 872 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
Col6a3E9PWQ3 Gm14697-201ENSMUST00000147144 648 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
Col6a3E9PWQ3 Prep-201ENSMUST00000099858 10933 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
Col6a3E9PWQ3 Dnah10-201ENSMUST00000058440 14038 ntAPPRIS P2 TSL 5 BASIC3.39□□□□□ -1.87
Col6a3E9PWQ3 Gm26696-201ENSMUST00000181941 2848 ntBASIC3.39□□□□□ -1.87
Col6a3E9PWQ3 Gm22034-201ENSMUST00000157283 134 ntBASIC3.39□□□□□ -1.87
Col6a3E9PWQ3 Gm16353-201ENSMUST00000159458 1223 ntBASIC3.39□□□□□ -1.87
Col6a3E9PWQ3 Gm8209-201ENSMUST00000206386 553 ntBASIC3.39□□□□□ -1.87
Col6a3E9PWQ3 AC153361.1-201ENSMUST00000219679 247 ntBASIC3.39□□□□□ -1.87
Col6a3E9PWQ3 Ubr4-212ENSMUST00000165860 15798 ntTSL 5 BASIC3.39□□□□□ -1.87
Col6a3E9PWQ3 Foxp2-201ENSMUST00000031545 5647 ntAPPRIS P3 TSL 1 (best) BASIC3.39□□□□□ -1.87
Col6a3E9PWQ3 Gm13762-201ENSMUST00000144908 2612 ntAPPRIS P1 TSL 3 BASIC3.39□□□□□ -1.87
Col6a3E9PWQ3 Olfr869-201ENSMUST00000213024 1783 ntAPPRIS P1 TSL 2 BASIC3.39□□□□□ -1.87
Col6a3E9PWQ3 Gm38070-201ENSMUST00000191850 6480 ntBASIC3.39□□□□□ -1.87
Col6a3E9PWQ3 Gm10647-201ENSMUST00000098612 2036 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
Col6a3E9PWQ3 Abi3bp-201ENSMUST00000048471 4687 ntAPPRIS P4 TSL 1 (best) BASIC3.38□□□□□ -1.87
Col6a3E9PWQ3 Vmn1r83-202ENSMUST00000226701 2788 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
Col6a3E9PWQ3 Olfr1280-203ENSMUST00000219291 6883 ntAPPRIS P1 TSL 3 BASIC3.38□□□□□ -1.87
Col6a3E9PWQ3 Gm26145-201ENSMUST00000104476 127 ntBASIC3.38□□□□□ -1.87
Col6a3E9PWQ3 Gm15844-201ENSMUST00000118016 576 ntBASIC3.38□□□□□ -1.87
Col6a3E9PWQ3 Gm26476-201ENSMUST00000122618 313 ntBASIC3.38□□□□□ -1.87
Col6a3E9PWQ3 Gm22722-201ENSMUST00000157467 132 ntBASIC3.38□□□□□ -1.87
Col6a3E9PWQ3 Gm22833-201ENSMUST00000158292 132 ntBASIC3.38□□□□□ -1.87
Col6a3E9PWQ3 Gm22947-201ENSMUST00000158559 91 ntBASIC3.38□□□□□ -1.87
Col6a3E9PWQ3 Olfr1005-ps1-201ENSMUST00000216207 488 ntBASIC3.38□□□□□ -1.87
Col6a3E9PWQ3 Olfr816-202ENSMUST00000213438 3306 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
Col6a3E9PWQ3 Olfr213-202ENSMUST00000220008 4020 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
Col6a3E9PWQ3 Olfr644-203ENSMUST00000213991 3506 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
Col6a3E9PWQ3 Mef2c-201ENSMUST00000005722 6217 ntTSL 5 BASIC3.38□□□□□ -1.87
Col6a3E9PWQ3 Olfr124-203ENSMUST00000216478 4416 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
Col6a3E9PWQ3 Gm24274-201ENSMUST00000116787 124 ntBASIC3.38□□□□□ -1.87
Col6a3E9PWQ3 Gm14810-201ENSMUST00000121628 486 ntBASIC3.38□□□□□ -1.87
Col6a3E9PWQ3 Gm24436-201ENSMUST00000157889 302 ntBASIC3.38□□□□□ -1.87
Col6a3E9PWQ3 Fth-ps2-201ENSMUST00000168364 516 ntBASIC3.38□□□□□ -1.87
Col6a3E9PWQ3 1700027I24Rik-201ENSMUST00000183612 696 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
Col6a3E9PWQ3 Gm44261-201ENSMUST00000203337 209 ntBASIC3.38□□□□□ -1.87
Col6a3E9PWQ3 Gm44543-201ENSMUST00000209136 396 ntBASIC3.38□□□□□ -1.87
Col6a3E9PWQ3 Gm45380-201ENSMUST00000210465 315 ntBASIC3.38□□□□□ -1.87
Col6a3E9PWQ3 2900018N21Rik-201ENSMUST00000195805 1580 ntBASIC3.38□□□□□ -1.87
Col6a3E9PWQ3 Olfr1318-201ENSMUST00000058176 1690 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
Col6a3E9PWQ3 AC131687.1-201ENSMUST00000225931 5446 ntBASIC3.38□□□□□ -1.87
Col6a3E9PWQ3 Ksr2-202ENSMUST00000180430 13125 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
Col6a3E9PWQ3 Mid2-203ENSMUST00000112993 5916 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
Col6a3E9PWQ3 Vmn1r-ps68-201ENSMUST00000174638 399 ntBASIC3.38□□□□□ -1.87
Col6a3E9PWQ3 Gm21874-201ENSMUST00000178374 699 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
Col6a3E9PWQ3 Mir6413-201ENSMUST00000184049 108 ntBASIC3.38□□□□□ -1.87
Col6a3E9PWQ3 Vmn1r49-202ENSMUST00000203791 1356 ntAPPRIS P1 TSL 2 BASIC3.38□□□□□ -1.87
Col6a3E9PWQ3 Gm9343-201ENSMUST00000209016 2609 ntBASIC3.38□□□□□ -1.87
Col6a3E9PWQ3 Gm45259-201ENSMUST00000209217 1006 ntBASIC3.38□□□□□ -1.87
Col6a3E9PWQ3 Olfr965-202ENSMUST00000213335 1700 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
Col6a3E9PWQ3 Olfr91-203ENSMUST00000217372 3809 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
Col6a3E9PWQ3 AC124562.2-201ENSMUST00000223888 2313 ntBASIC3.38□□□□□ -1.87
Col6a3E9PWQ3 Olfr206-201ENSMUST00000084791 1005 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
Col6a3E9PWQ3 Dnah17-204ENSMUST00000132685 13612 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
Col6a3E9PWQ3 Spink5-201ENSMUST00000069245 4785 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
Col6a3E9PWQ3 Olfr806-201ENSMUST00000095245 942 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
Col6a3E9PWQ3 Olfr112-205ENSMUST00000213274 3558 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
Retrieved 100 of 76,532 protein–RNA pairs in 159.3 ms