Protein–RNA interactions for Protein: A0A0G2JFX3

Trav13d-4, T cell receptor alpha variable 13D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-4A0A0G2JFX3 Ssxb3-202ENSMUST00000089379 604 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
Trav13d-4A0A0G2JFX3 Vmn1r87-201ENSMUST00000094827 888 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
Trav13d-4A0A0G2JFX3 Kncn-201ENSMUST00000097918 951 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
Trav13d-4A0A0G2JFX3 Olfr753-ps1-201ENSMUST00000174025 3121 ntAPPRIS P1 TSL 3 BASIC3.55□□□□□ -1.84
Trav13d-4A0A0G2JFX3 Xist-201ENSMUST00000127786 17769 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
Trav13d-4A0A0G2JFX3 Kcnh8-201ENSMUST00000039366 4287 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
Trav13d-4A0A0G2JFX3 Slc6a15-201ENSMUST00000074204 3607 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
Trav13d-4A0A0G2JFX3 Wwp1-201ENSMUST00000035982 4832 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
Trav13d-4A0A0G2JFX3 Slco1a1-202ENSMUST00000168119 3904 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
Trav13d-4A0A0G2JFX3 Gm37964-201ENSMUST00000192459 4905 ntBASIC3.55□□□□□ -1.84
Trav13d-4A0A0G2JFX3 Dbpht2-202ENSMUST00000221311 5341 ntBASIC3.55□□□□□ -1.84
Trav13d-4A0A0G2JFX3 2310001H17Rik-203ENSMUST00000181517 3981 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
Trav13d-4A0A0G2JFX3 Gm14391-203ENSMUST00000109056 1956 ntTSL 3 BASIC3.54□□□□□ -1.84
Trav13d-4A0A0G2JFX3 Olfr910-201ENSMUST00000215122 1996 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
Trav13d-4A0A0G2JFX3 Sirpb1b-201ENSMUST00000091319 1499 ntAPPRIS P2 TSL 1 (best) BASIC3.54□□□□□ -1.84
Trav13d-4A0A0G2JFX3 Gm20515-201ENSMUST00000174440 4824 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
Trav13d-4A0A0G2JFX3 Olfr1226-204ENSMUST00000215987 3251 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
Trav13d-4A0A0G2JFX3 AC159308.1-201ENSMUST00000216615 1351 ntBASIC3.54□□□□□ -1.84
Trav13d-4A0A0G2JFX3 Olfr414-202ENSMUST00000192358 4526 ntAPPRIS P1 TSL 2 BASIC3.54□□□□□ -1.84
Trav13d-4A0A0G2JFX3 Dmd-201ENSMUST00000113991 4438 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
Trav13d-4A0A0G2JFX3 Vmn1r195-202ENSMUST00000228711 3056 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
Trav13d-4A0A0G2JFX3 Zfp950-207ENSMUST00000180544 2568 ntAPPRIS P1 TSL 3 BASIC3.54□□□□□ -1.84
Trav13d-4A0A0G2JFX3 Gm5073-201ENSMUST00000118222 820 ntBASIC3.54□□□□□ -1.84
Trav13d-4A0A0G2JFX3 Vmn1r-ps2-201ENSMUST00000118464 834 ntBASIC3.54□□□□□ -1.84
Trav13d-4A0A0G2JFX3 Gm13743-201ENSMUST00000121486 724 ntBASIC3.54□□□□□ -1.84
Trav13d-4A0A0G2JFX3 Gm14411-201ENSMUST00000121798 914 ntBASIC3.54□□□□□ -1.84
Trav13d-4A0A0G2JFX3 n-R5s207-201ENSMUST00000122497 118 ntBASIC3.54□□□□□ -1.84
Trav13d-4A0A0G2JFX3 Gm25784-201ENSMUST00000122524 81 ntBASIC3.54□□□□□ -1.84
Trav13d-4A0A0G2JFX3 Mir1900-201ENSMUST00000122714 78 ntBASIC3.54□□□□□ -1.84
Trav13d-4A0A0G2JFX3 Gm15218-201ENSMUST00000131006 618 ntTSL 5 BASIC3.54□□□□□ -1.84
Trav13d-4A0A0G2JFX3 Gm13565-201ENSMUST00000133596 700 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
Trav13d-4A0A0G2JFX3 Gm16351-201ENSMUST00000142008 250 ntTSL 3 BASIC3.54□□□□□ -1.84
Trav13d-4A0A0G2JFX3 Gm14211-201ENSMUST00000152250 408 ntTSL 3 BASIC3.54□□□□□ -1.84
Trav13d-4A0A0G2JFX3 Gm12971-201ENSMUST00000154720 511 ntTSL 5 BASIC3.54□□□□□ -1.84
Trav13d-4A0A0G2JFX3 Gm25667-201ENSMUST00000157701 275 ntBASIC3.54□□□□□ -1.84
Trav13d-4A0A0G2JFX3 Gm22841-201ENSMUST00000158443 62 ntBASIC3.54□□□□□ -1.84
Trav13d-4A0A0G2JFX3 Obox4-ps35-201ENSMUST00000173825 680 ntTSL 3 BASIC3.54□□□□□ -1.84
Trav13d-4A0A0G2JFX3 Rpl31-ps16-201ENSMUST00000181130 376 ntBASIC3.54□□□□□ -1.84
Trav13d-4A0A0G2JFX3 Gm24949-201ENSMUST00000183609 215 ntBASIC3.54□□□□□ -1.84
Trav13d-4A0A0G2JFX3 Mir6541-201ENSMUST00000183649 110 ntBASIC3.54□□□□□ -1.84
Trav13d-4A0A0G2JFX3 Cox6b2-209ENSMUST00000184143 435 ntTSL 2 BASIC3.54□□□□□ -1.84
Trav13d-4A0A0G2JFX3 Gm29504-201ENSMUST00000185605 537 ntTSL 5 BASIC3.54□□□□□ -1.84
Trav13d-4A0A0G2JFX3 D530049I02Rik-201ENSMUST00000186582 562 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
Trav13d-4A0A0G2JFX3 Gm28565-202ENSMUST00000186615 537 ntTSL 5 BASIC3.54□□□□□ -1.84
Trav13d-4A0A0G2JFX3 Gm28297-201ENSMUST00000186679 537 ntTSL 5 BASIC3.54□□□□□ -1.84
Trav13d-4A0A0G2JFX3 1700064J06Rik-201ENSMUST00000187551 386 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
Trav13d-4A0A0G2JFX3 Gm29578-201ENSMUST00000188809 537 ntTSL 5 BASIC3.54□□□□□ -1.84
Trav13d-4A0A0G2JFX3 Gm29376-201ENSMUST00000189357 835 ntBASIC3.54□□□□□ -1.84
Trav13d-4A0A0G2JFX3 Gm29166-202ENSMUST00000189600 537 ntTSL 5 BASIC3.54□□□□□ -1.84
Trav13d-4A0A0G2JFX3 Gm28765-201ENSMUST00000189752 537 ntTSL 5 BASIC3.54□□□□□ -1.84
Trav13d-4A0A0G2JFX3 Gm28522-202ENSMUST00000190561 537 ntTSL 5 BASIC3.54□□□□□ -1.84
Trav13d-4A0A0G2JFX3 Gm8325-202ENSMUST00000193411 182 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
Trav13d-4A0A0G2JFX3 Gm18752-202ENSMUST00000193627 587 ntTSL 3 BASIC3.54□□□□□ -1.84
Trav13d-4A0A0G2JFX3 Gm37030-201ENSMUST00000194254 295 ntBASIC3.54□□□□□ -1.84
Trav13d-4A0A0G2JFX3 Gm44118-201ENSMUST00000204665 229 ntBASIC3.54□□□□□ -1.84
Trav13d-4A0A0G2JFX3 Gm17988-201ENSMUST00000208796 535 ntBASIC3.54□□□□□ -1.84
Trav13d-4A0A0G2JFX3 Gm5485-201ENSMUST00000212197 628 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
Trav13d-4A0A0G2JFX3 AC151971.3-201ENSMUST00000214694 404 ntBASIC3.54□□□□□ -1.84
Trav13d-4A0A0G2JFX3 Gm46223-201ENSMUST00000215196 675 ntBASIC3.54□□□□□ -1.84
Trav13d-4A0A0G2JFX3 Gm9068-201ENSMUST00000217393 455 ntBASIC3.54□□□□□ -1.84
Trav13d-4A0A0G2JFX3 AC155927.1-201ENSMUST00000220114 1200 ntTSL 5 BASIC3.54□□□□□ -1.84
Trav13d-4A0A0G2JFX3 AC154329.2-201ENSMUST00000225257 383 ntBASIC3.54□□□□□ -1.84
Trav13d-4A0A0G2JFX3 AC122858.1-202ENSMUST00000228290 986 ntBASIC3.54□□□□□ -1.84
Trav13d-4A0A0G2JFX3 CT030238.4-201ENSMUST00000228579 801 ntBASIC3.54□□□□□ -1.84
Trav13d-4A0A0G2JFX3 Lcn4-201ENSMUST00000028283 774 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
Trav13d-4A0A0G2JFX3 Ghrl-201ENSMUST00000064993 527 ntAPPRIS P3 TSL 1 (best) BASIC3.54□□□□□ -1.84
Trav13d-4A0A0G2JFX3 Gm8526-201ENSMUST00000079153 475 ntBASIC3.54□□□□□ -1.84
Trav13d-4A0A0G2JFX3 Zfp932-202ENSMUST00000112536 2509 ntTSL 5 BASIC3.54□□□□□ -1.84
Trav13d-4A0A0G2JFX3 Gm38240-201ENSMUST00000195110 2487 ntBASIC3.54□□□□□ -1.84
Trav13d-4A0A0G2JFX3 Vmn1r14-203ENSMUST00000227574 7394 ntAPPRIS ALT2 BASIC3.54□□□□□ -1.84
Trav13d-4A0A0G2JFX3 Gm40987-202ENSMUST00000221856 1588 ntTSL 5 BASIC3.54□□□□□ -1.84
Trav13d-4A0A0G2JFX3 Vmn1r169-205ENSMUST00000228832 2749 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
Trav13d-4A0A0G2JFX3 Gm11867-201ENSMUST00000133363 1909 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
Trav13d-4A0A0G2JFX3 Gm43428-201ENSMUST00000200108 3845 ntBASIC3.54□□□□□ -1.84
Trav13d-4A0A0G2JFX3 Gm42986-201ENSMUST00000201618 3385 ntBASIC3.54□□□□□ -1.84
Trav13d-4A0A0G2JFX3 Lgalsl-201ENSMUST00000047028 3362 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
Trav13d-4A0A0G2JFX3 Fastkd2-201ENSMUST00000027103 4486 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
Trav13d-4A0A0G2JFX3 Vmn1r39-203ENSMUST00000227285 2245 ntAPPRIS ALT2 BASIC3.54□□□□□ -1.84
Trav13d-4A0A0G2JFX3 Pak3-204ENSMUST00000112865 8484 ntAPPRIS P3 TSL 5 BASIC3.54□□□□□ -1.84
Trav13d-4A0A0G2JFX3 Slfn8-201ENSMUST00000038141 4011 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
Trav13d-4A0A0G2JFX3 Gm13089-201ENSMUST00000073532 1807 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
Trav13d-4A0A0G2JFX3 Zfp62-212ENSMUST00000180016 3964 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
Trav13d-4A0A0G2JFX3 Jrkl-201ENSMUST00000110582 3223 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
Trav13d-4A0A0G2JFX3 9430007A20Rik-201ENSMUST00000030328 1406 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
Trav13d-4A0A0G2JFX3 Zfp119b-202ENSMUST00000189452 2078 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
Trav13d-4A0A0G2JFX3 Abi3bp-202ENSMUST00000096012 4387 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
Trav13d-4A0A0G2JFX3 Gm38073-201ENSMUST00000195141 3665 ntBASIC3.53□□□□□ -1.84
Trav13d-4A0A0G2JFX3 Gm43888-201ENSMUST00000204405 2587 ntBASIC3.53□□□□□ -1.84
Trav13d-4A0A0G2JFX3 Mir466f-2-201ENSMUST00000104805 94 ntBASIC3.53□□□□□ -1.84
Trav13d-4A0A0G2JFX3 Apoa2-203ENSMUST00000111320 470 ntAPPRIS P1 TSL 2 BASIC3.53□□□□□ -1.84
Trav13d-4A0A0G2JFX3 Gm25507-201ENSMUST00000116981 144 ntBASIC3.53□□□□□ -1.84
Trav13d-4A0A0G2JFX3 Gm15185-201ENSMUST00000117397 746 ntBASIC3.53□□□□□ -1.84
Trav13d-4A0A0G2JFX3 Rpl31-ps5-201ENSMUST00000118086 375 ntBASIC3.53□□□□□ -1.84
Trav13d-4A0A0G2JFX3 Gm14785-201ENSMUST00000120185 539 ntBASIC3.53□□□□□ -1.84
Trav13d-4A0A0G2JFX3 Gm14766-201ENSMUST00000121689 367 ntBASIC3.53□□□□□ -1.84
Trav13d-4A0A0G2JFX3 Mup-ps12-201ENSMUST00000126217 549 ntBASIC3.53□□□□□ -1.84
Trav13d-4A0A0G2JFX3 Gm15848-203ENSMUST00000136015 482 ntTSL 5 BASIC3.53□□□□□ -1.84
Trav13d-4A0A0G2JFX3 Gm23537-201ENSMUST00000157536 330 ntBASIC3.53□□□□□ -1.84
Trav13d-4A0A0G2JFX3 Gm23662-201ENSMUST00000158046 111 ntBASIC3.53□□□□□ -1.84
Trav13d-4A0A0G2JFX3 Gm23046-201ENSMUST00000158369 284 ntBASIC3.53□□□□□ -1.84
Retrieved 100 of 76,532 protein–RNA pairs in 87.2 ms