Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Olfr623-201ENSMUST00000068531 1075 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
Trim3Q9R1R2 Olfr507-201ENSMUST00000080014 951 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
Trim3Q9R1R2 Tas2r110-201ENSMUST00000082014 1002 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
Trim3Q9R1R2 Gm22444-201ENSMUST00000093693 108 ntBASIC3.8□□□□□ -1.8
Trim3Q9R1R2 Gm7381-201ENSMUST00000098958 300 ntBASIC3.8□□□□□ -1.8
Trim3Q9R1R2 Gm10340-201ENSMUST00000170790 1755 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Trim3Q9R1R2 Nebl-207ENSMUST00000132418 1734 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Trim3Q9R1R2 P2ry14-205ENSMUST00000197220 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Trim3Q9R1R2 Dnase2b-201ENSMUST00000029836 2566 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Trim3Q9R1R2 Cd46-203ENSMUST00000162650 6288 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Trim3Q9R1R2 Gm14308-201ENSMUST00000108990 1628 ntAPPRIS P1 TSL 2 BASIC3.8□□□□□ -1.8
Trim3Q9R1R2 Obox1-201ENSMUST00000067288 1512 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Trim3Q9R1R2 AC123858.1-201ENSMUST00000226948 1874 ntBASIC3.79□□□□□ -1.8
Trim3Q9R1R2 Cfap97-206ENSMUST00000164504 4521 ntAPPRIS P2 TSL 1 (best) BASIC3.79□□□□□ -1.8
Trim3Q9R1R2 St8sia4-204ENSMUST00000189556 10027 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
Trim3Q9R1R2 Neurod4-201ENSMUST00000061571 3345 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Trim3Q9R1R2 Gm44897-201ENSMUST00000206187 1341 ntBASIC3.79□□□□□ -1.8
Trim3Q9R1R2 Gm19335-201ENSMUST00000195836 2069 ntBASIC3.79□□□□□ -1.8
Trim3Q9R1R2 Igkv11-125-201ENSMUST00000103311 350 ntAPPRIS ALT2 BASIC3.79□□□□□ -1.8
Trim3Q9R1R2 Gm15001-201ENSMUST00000117657 795 ntBASIC3.79□□□□□ -1.8
Trim3Q9R1R2 Gm7421-201ENSMUST00000119298 639 ntBASIC3.79□□□□□ -1.8
Trim3Q9R1R2 Gm7365-201ENSMUST00000120877 639 ntBASIC3.79□□□□□ -1.8
Trim3Q9R1R2 Gm15061-201ENSMUST00000121076 1046 ntBASIC3.79□□□□□ -1.8
Trim3Q9R1R2 Gm24592-201ENSMUST00000122505 106 ntBASIC3.79□□□□□ -1.8
Trim3Q9R1R2 4930505K14Rik-201ENSMUST00000155504 515 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
Trim3Q9R1R2 Gm23231-201ENSMUST00000157299 104 ntBASIC3.79□□□□□ -1.8
Trim3Q9R1R2 Gm22789-201ENSMUST00000157884 130 ntBASIC3.79□□□□□ -1.8
Trim3Q9R1R2 Gm25971-201ENSMUST00000158953 286 ntBASIC3.79□□□□□ -1.8
Trim3Q9R1R2 Vmn1r160-201ENSMUST00000171745 924 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Trim3Q9R1R2 Mir5098-201ENSMUST00000175320 82 ntBASIC3.79□□□□□ -1.8
Trim3Q9R1R2 Vmn1r-ps146-201ENSMUST00000176131 525 ntBASIC3.79□□□□□ -1.8
Trim3Q9R1R2 Gm27733-201ENSMUST00000184803 68 ntBASIC3.79□□□□□ -1.8
Trim3Q9R1R2 Gm29327-201ENSMUST00000188229 388 ntTSL 5 BASIC3.79□□□□□ -1.8
Trim3Q9R1R2 Scgb2b16-ps-201ENSMUST00000188720 333 ntBASIC3.79□□□□□ -1.8
Trim3Q9R1R2 Gm18303-201ENSMUST00000190055 1176 ntBASIC3.79□□□□□ -1.8
Trim3Q9R1R2 Gm37857-201ENSMUST00000191784 1199 ntBASIC3.79□□□□□ -1.8
Trim3Q9R1R2 Gm18660-201ENSMUST00000199542 629 ntBASIC3.79□□□□□ -1.8
Trim3Q9R1R2 Gm43604-201ENSMUST00000199799 705 ntBASIC3.79□□□□□ -1.8
Trim3Q9R1R2 Gm32780-201ENSMUST00000201402 540 ntTSL 3 BASIC3.79□□□□□ -1.8
Trim3Q9R1R2 Cyp2b26-ps-201ENSMUST00000206238 1090 ntBASIC3.79□□□□□ -1.8
Trim3Q9R1R2 Gm35325-201ENSMUST00000208979 771 ntTSL 2 BASIC3.79□□□□□ -1.8
Trim3Q9R1R2 Gm45735-201ENSMUST00000212779 319 ntBASIC3.79□□□□□ -1.8
Trim3Q9R1R2 Gm4263-202ENSMUST00000221392 667 ntBASIC3.79□□□□□ -1.8
Trim3Q9R1R2 1700011B04Rik-211ENSMUST00000222690 394 ntTSL 5 BASIC3.79□□□□□ -1.8
Trim3Q9R1R2 AC162934.1-201ENSMUST00000222880 309 ntBASIC3.79□□□□□ -1.8
Trim3Q9R1R2 AC117656.3-202ENSMUST00000225842 1055 ntBASIC3.79□□□□□ -1.8
Trim3Q9R1R2 AC154692.1-201ENSMUST00000228314 544 ntBASIC3.79□□□□□ -1.8
Trim3Q9R1R2 Mir26a-1-201ENSMUST00000083579 90 ntBASIC3.79□□□□□ -1.8
Trim3Q9R1R2 Olfr1195-201ENSMUST00000099818 927 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Trim3Q9R1R2 Olfr1105-201ENSMUST00000099868 939 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Trim3Q9R1R2 Gm13912-201ENSMUST00000156541 1860 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
Trim3Q9R1R2 AC153522.2-201ENSMUST00000218389 3853 ntBASIC3.79□□□□□ -1.8
Trim3Q9R1R2 Gm7173-201ENSMUST00000101410 2832 ntAPPRIS P4 TSL 5 BASIC3.79□□□□□ -1.8
Trim3Q9R1R2 Olfr1305-202ENSMUST00000213405 1815 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Trim3Q9R1R2 Vmn2r-ps43-201ENSMUST00000173798 2473 ntBASIC3.79□□□□□ -1.8
Trim3Q9R1R2 Olfr836-203ENSMUST00000215981 5046 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
Trim3Q9R1R2 Skint4-202ENSMUST00000106564 3997 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
Trim3Q9R1R2 Skint4-204ENSMUST00000106566 3997 ntAPPRIS P3 TSL 1 (best) BASIC3.78□□□□□ -1.8
Trim3Q9R1R2 Ktn1-226ENSMUST00000191511 3962 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
Trim3Q9R1R2 Hmgb1-203ENSMUST00000110505 1720 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
Trim3Q9R1R2 Gm14781-201ENSMUST00000078469 1360 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
Trim3Q9R1R2 Btbd35f5-201ENSMUST00000179538 1950 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
Trim3Q9R1R2 Zfp955a-201ENSMUST00000008830 1638 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
Trim3Q9R1R2 Gm13230-201ENSMUST00000120870 1575 ntBASIC3.78□□□□□ -1.8
Trim3Q9R1R2 Sva-202ENSMUST00000117406 645 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
Trim3Q9R1R2 Gm12982-201ENSMUST00000117408 190 ntBASIC3.78□□□□□ -1.8
Trim3Q9R1R2 Olfr595-ps1-201ENSMUST00000118180 954 ntBASIC3.78□□□□□ -1.8
Trim3Q9R1R2 Gm12507-201ENSMUST00000119155 415 ntBASIC3.78□□□□□ -1.8
Trim3Q9R1R2 Gm5384-201ENSMUST00000120313 463 ntBASIC3.78□□□□□ -1.8
Trim3Q9R1R2 Gm9003-201ENSMUST00000121810 482 ntBASIC3.78□□□□□ -1.8
Trim3Q9R1R2 Gm16068-201ENSMUST00000136557 504 ntTSL 3 BASIC3.78□□□□□ -1.8
Trim3Q9R1R2 Sval2-201ENSMUST00000014248 585 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
Trim3Q9R1R2 Gm5963-201ENSMUST00000143451 236 ntBASIC3.78□□□□□ -1.8
Trim3Q9R1R2 4930503B20Rik-203ENSMUST00000149825 970 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
Trim3Q9R1R2 Gm26036-201ENSMUST00000158149 144 ntBASIC3.78□□□□□ -1.8
Trim3Q9R1R2 Vmn2r-ps74-201ENSMUST00000174705 917 ntBASIC3.78□□□□□ -1.8
Trim3Q9R1R2 Mir3104-201ENSMUST00000174911 63 ntBASIC3.78□□□□□ -1.8
Trim3Q9R1R2 Gm21232-201ENSMUST00000182187 1006 ntBASIC3.78□□□□□ -1.8
Trim3Q9R1R2 Gm29341-201ENSMUST00000190179 370 ntTSL 5 BASIC3.78□□□□□ -1.8
Trim3Q9R1R2 Csn1s2b-204ENSMUST00000197301 627 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
Trim3Q9R1R2 Gm36259-201ENSMUST00000197340 392 ntBASIC3.78□□□□□ -1.8
Trim3Q9R1R2 Gm5339-201ENSMUST00000210551 1102 ntBASIC3.78□□□□□ -1.8
Trim3Q9R1R2 Gm18645-202ENSMUST00000212222 760 ntBASIC3.78□□□□□ -1.8
Trim3Q9R1R2 Olfr950-ps1-201ENSMUST00000213804 878 ntBASIC3.78□□□□□ -1.8
Trim3Q9R1R2 Gm36173-201ENSMUST00000219101 1163 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
Trim3Q9R1R2 Gm17820-201ENSMUST00000220213 1068 ntBASIC3.78□□□□□ -1.8
Trim3Q9R1R2 CT009764.1-201ENSMUST00000222260 483 ntBASIC3.78□□□□□ -1.8
Trim3Q9R1R2 CT030705.1-201ENSMUST00000223971 533 ntBASIC3.78□□□□□ -1.8
Trim3Q9R1R2 AC140209.1-201ENSMUST00000227875 284 ntBASIC3.78□□□□□ -1.8
Trim3Q9R1R2 Znrd1as-201ENSMUST00000040177 976 ntAPPRIS P2 TSL 1 (best) BASIC3.78□□□□□ -1.8
Trim3Q9R1R2 Olfr832-201ENSMUST00000060601 939 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
Trim3Q9R1R2 9430025C20Rik-201ENSMUST00000068663 2115 ntBASIC3.78□□□□□ -1.8
Trim3Q9R1R2 Olfr1369-ps1-201ENSMUST00000079050 954 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
Trim3Q9R1R2 Mir346-201ENSMUST00000083547 98 ntBASIC3.78□□□□□ -1.8
Trim3Q9R1R2 Gm26176-201ENSMUST00000083795 105 ntBASIC3.78□□□□□ -1.8
Trim3Q9R1R2 Olfr870-201ENSMUST00000086476 936 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
Trim3Q9R1R2 Olfr834-201ENSMUST00000086492 939 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
Trim3Q9R1R2 Olfr810-201ENSMUST00000091986 1006 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
Trim3Q9R1R2 1700010D01Rik-201ENSMUST00000096366 507 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
Trim3Q9R1R2 Olfr993-201ENSMUST00000099926 945 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
Retrieved 100 of 76,532 protein–RNA pairs in 63.8 ms