Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Ear-ps7-201ENSMUST00000161287 442 ntBASIC6.07□□□□□ -1.44
Trim11Q99PQ2 Ear-ps5-201ENSMUST00000164700 463 ntBASIC6.07□□□□□ -1.44
Trim11Q99PQ2 Snrpe-203ENSMUST00000166291 360 ntTSL 3 BASIC6.07□□□□□ -1.44
Trim11Q99PQ2 Gm23864-201ENSMUST00000177607 107 ntBASIC6.07□□□□□ -1.44
Trim11Q99PQ2 Gm21788-201ENSMUST00000177878 543 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
Trim11Q99PQ2 Gm4854-201ENSMUST00000185902 574 ntBASIC6.07□□□□□ -1.44
Trim11Q99PQ2 Gm28319-201ENSMUST00000189560 226 ntTSL 5 BASIC6.07□□□□□ -1.44
Trim11Q99PQ2 Gm37445-201ENSMUST00000195318 242 ntBASIC6.07□□□□□ -1.44
Trim11Q99PQ2 Gm43070-201ENSMUST00000196938 415 ntBASIC6.07□□□□□ -1.44
Trim11Q99PQ2 Mir409-201ENSMUST00000198153 79 ntBASIC6.07□□□□□ -1.44
Trim11Q99PQ2 Gm5-202ENSMUST00000202386 420 ntTSL 3 BASIC6.07□□□□□ -1.44
Trim11Q99PQ2 Gm44870-201ENSMUST00000207291 357 ntBASIC6.07□□□□□ -1.44
Trim11Q99PQ2 Gm45249-201ENSMUST00000211021 348 ntBASIC6.07□□□□□ -1.44
Trim11Q99PQ2 Gm45402-201ENSMUST00000211796 223 ntBASIC6.07□□□□□ -1.44
Trim11Q99PQ2 Gm18703-201ENSMUST00000215318 333 ntBASIC6.07□□□□□ -1.44
Trim11Q99PQ2 AC166358.3-201ENSMUST00000221456 181 ntBASIC6.07□□□□□ -1.44
Trim11Q99PQ2 AC129085.4-201ENSMUST00000224536 570 ntBASIC6.07□□□□□ -1.44
Trim11Q99PQ2 AC123665.4-201ENSMUST00000228790 249 ntBASIC6.07□□□□□ -1.44
Trim11Q99PQ2 Olfr986-201ENSMUST00000062229 1016 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
Trim11Q99PQ2 Olfr944-201ENSMUST00000079650 936 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
Trim11Q99PQ2 Gm23627-201ENSMUST00000082459 107 ntBASIC6.07□□□□□ -1.44
Trim11Q99PQ2 Gm22502-201ENSMUST00000082488 107 ntBASIC6.07□□□□□ -1.44
Trim11Q99PQ2 Gm24149-201ENSMUST00000082757 107 ntBASIC6.07□□□□□ -1.44
Trim11Q99PQ2 Olfr947-ps1-201ENSMUST00000214075 2165 ntAPPRIS P1 TSL 3 BASIC6.07□□□□□ -1.44
Trim11Q99PQ2 Fam107b-209ENSMUST00000226435 3602 ntBASIC6.07□□□□□ -1.44
Trim11Q99PQ2 Gm3604-201ENSMUST00000107989 1677 ntTSL 5 BASIC6.07□□□□□ -1.44
Trim11Q99PQ2 Gm29112-201ENSMUST00000188962 3487 ntBASIC6.06□□□□□ -1.44
Trim11Q99PQ2 Gpr65-201ENSMUST00000075072 2069 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Trim11Q99PQ2 Gm42686-201ENSMUST00000199172 4108 ntBASIC6.06□□□□□ -1.44
Trim11Q99PQ2 Olfr518-202ENSMUST00000217803 2994 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Trim11Q99PQ2 Olfr584-202ENSMUST00000214215 3152 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Trim11Q99PQ2 Zfp120-203ENSMUST00000109931 4033 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Trim11Q99PQ2 Lingo2-210ENSMUST00000164772 3562 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Trim11Q99PQ2 Olfr9-201ENSMUST00000091996 2672 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
Trim11Q99PQ2 Gm7298-201ENSMUST00000204124 4657 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Trim11Q99PQ2 Chrm3-201ENSMUST00000063093 1770 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
Trim11Q99PQ2 Gm5890-201ENSMUST00000190145 1336 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Trim11Q99PQ2 Vmn2r-ps120-201ENSMUST00000176341 2409 ntBASIC6.06□□□□□ -1.44
Trim11Q99PQ2 Fam26d-201ENSMUST00000048052 3711 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Trim11Q99PQ2 R3hdm1-201ENSMUST00000036288 4795 ntAPPRIS P2 TSL 5 BASIC6.06□□□□□ -1.44
Trim11Q99PQ2 Gm13355-201ENSMUST00000117996 317 ntBASIC6.06□□□□□ -1.44
Trim11Q99PQ2 Gm7421-201ENSMUST00000119298 639 ntBASIC6.06□□□□□ -1.44
Trim11Q99PQ2 Gm7365-201ENSMUST00000120877 639 ntBASIC6.06□□□□□ -1.44
Trim11Q99PQ2 Gm11216-201ENSMUST00000125240 354 ntTSL 5 BASIC6.06□□□□□ -1.44
Trim11Q99PQ2 Gm14364-201ENSMUST00000129209 267 ntBASIC6.06□□□□□ -1.44
Trim11Q99PQ2 Gm3362-201ENSMUST00000148102 466 ntBASIC6.06□□□□□ -1.44
Trim11Q99PQ2 Gm24584-201ENSMUST00000157972 107 ntBASIC6.06□□□□□ -1.44
Trim11Q99PQ2 Gm25718-201ENSMUST00000158632 118 ntBASIC6.06□□□□□ -1.44
Trim11Q99PQ2 Gm15838-201ENSMUST00000161575 180 ntBASIC6.06□□□□□ -1.44
Trim11Q99PQ2 Ear10-202ENSMUST00000163652 471 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
Trim11Q99PQ2 Obox3-ps5-201ENSMUST00000176412 1003 ntBASIC6.06□□□□□ -1.44
Trim11Q99PQ2 Gm22286-201ENSMUST00000179708 107 ntBASIC6.06□□□□□ -1.44
Trim11Q99PQ2 Gm5849-201ENSMUST00000180151 351 ntAPPRIS P1 TSL 3 BASIC6.06□□□□□ -1.44
Trim11Q99PQ2 Gm4258-201ENSMUST00000182127 506 ntTSL 2 BASIC6.06□□□□□ -1.44
Trim11Q99PQ2 Gm10105-201ENSMUST00000184601 270 ntBASIC6.06□□□□□ -1.44
Trim11Q99PQ2 4930532M18Rik-202ENSMUST00000190980 534 ntTSL 3 BASIC6.06□□□□□ -1.44
Trim11Q99PQ2 Gm38167-201ENSMUST00000195704 1178 ntBASIC6.06□□□□□ -1.44
Trim11Q99PQ2 Gm17956-201ENSMUST00000199931 838 ntBASIC6.06□□□□□ -1.44
Trim11Q99PQ2 4930596I21Rik-201ENSMUST00000200494 461 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Trim11Q99PQ2 Gm44307-201ENSMUST00000204466 764 ntBASIC6.06□□□□□ -1.44
Trim11Q99PQ2 Olfr1556-ps1-201ENSMUST00000204688 466 ntBASIC6.06□□□□□ -1.44
Trim11Q99PQ2 2210406H18Rik-201ENSMUST00000207806 1108 ntBASIC6.06□□□□□ -1.44
Trim11Q99PQ2 Gm35325-201ENSMUST00000208979 771 ntTSL 2 BASIC6.06□□□□□ -1.44
Trim11Q99PQ2 Gm39384-201ENSMUST00000213703 743 ntTSL 5 BASIC6.06□□□□□ -1.44
Trim11Q99PQ2 AV026068-237ENSMUST00000226075 572 ntBASIC6.06□□□□□ -1.44
Trim11Q99PQ2 Vmn1r34-202ENSMUST00000226262 2952 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
Trim11Q99PQ2 Rpl38-201ENSMUST00000077915 364 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Trim11Q99PQ2 Gm22749-201ENSMUST00000082490 107 ntBASIC6.06□□□□□ -1.44
Trim11Q99PQ2 Snord42a-201ENSMUST00000082606 65 ntBASIC6.06□□□□□ -1.44
Trim11Q99PQ2 Gm24856-201ENSMUST00000082809 107 ntBASIC6.06□□□□□ -1.44
Trim11Q99PQ2 n-R5s204-201ENSMUST00000082972 119 ntBASIC6.06□□□□□ -1.44
Trim11Q99PQ2 Gm25258-201ENSMUST00000083049 107 ntBASIC6.06□□□□□ -1.44
Trim11Q99PQ2 Gm24535-201ENSMUST00000083140 107 ntBASIC6.06□□□□□ -1.44
Trim11Q99PQ2 Gm22352-201ENSMUST00000083917 107 ntBASIC6.06□□□□□ -1.44
Trim11Q99PQ2 Olfr33-201ENSMUST00000084817 957 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
Trim11Q99PQ2 Defa31-201ENSMUST00000098896 377 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Trim11Q99PQ2 Scn9a-206ENSMUST00000164384 7530 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
Trim11Q99PQ2 Slc5a12-202ENSMUST00000111026 3518 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Trim11Q99PQ2 Zscan4c-201ENSMUST00000131379 2276 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Trim11Q99PQ2 Gm43333-201ENSMUST00000198340 2262 ntBASIC6.06□□□□□ -1.44
Trim11Q99PQ2 Gm18163-201ENSMUST00000197877 1643 ntBASIC6.06□□□□□ -1.44
Trim11Q99PQ2 Olfr47-202ENSMUST00000215569 1603 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Trim11Q99PQ2 Mdn1-211ENSMUST00000178134 17959 ntAPPRIS P2 TSL 5 BASIC6.06□□□□□ -1.44
Trim11Q99PQ2 Slc22a27-201ENSMUST00000075619 2152 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Trim11Q99PQ2 Gm8267-201ENSMUST00000165003 1751 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
Trim11Q99PQ2 Olfr1043-203ENSMUST00000213949 1778 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Trim11Q99PQ2 AC159308.1-201ENSMUST00000216615 1351 ntBASIC6.06□□□□□ -1.44
Trim11Q99PQ2 Hgf-204ENSMUST00000199581 3468 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Trim11Q99PQ2 Ptprd-204ENSMUST00000102834 8084 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Trim11Q99PQ2 Gm44235-201ENSMUST00000204312 3058 ntBASIC6.05□□□□□ -1.44
Trim11Q99PQ2 3222401L13Rik-202ENSMUST00000192137 6292 ntBASIC6.05□□□□□ -1.44
Trim11Q99PQ2 9230109A22Rik-202ENSMUST00000228644 1853 ntBASIC6.05□□□□□ -1.44
Trim11Q99PQ2 Vmn2r-ps123-201ENSMUST00000176763 2410 ntBASIC6.05□□□□□ -1.44
Trim11Q99PQ2 Cnot1-202ENSMUST00000098473 8390 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Trim11Q99PQ2 Ighv1-4-201ENSMUST00000103493 351 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Trim11Q99PQ2 Gm21637-201ENSMUST00000105124 778 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Trim11Q99PQ2 Gm5381-201ENSMUST00000117975 1250 ntBASIC6.05□□□□□ -1.44
Trim11Q99PQ2 Vmn1r-ps97-201ENSMUST00000118338 603 ntBASIC6.05□□□□□ -1.44
Trim11Q99PQ2 Gm14292-201ENSMUST00000118761 456 ntBASIC6.05□□□□□ -1.44
Trim11Q99PQ2 Gm14517-201ENSMUST00000119040 337 ntBASIC6.05□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 84.8 ms