Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Rgsl1-201ENSMUST00000124558 3642 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
Clp1Q99LI9 Olfr629-202ENSMUST00000213906 2548 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
Clp1Q99LI9 Trim5-202ENSMUST00000098179 3655 ntAPPRIS P2 TSL 1 (best) BASIC5.89□□□□□ -1.47
Clp1Q99LI9 Vmn2r25-201ENSMUST00000162046 2568 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Clp1Q99LI9 Pcdh15-222ENSMUST00000147189 6806 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
Clp1Q99LI9 Gm32736-201ENSMUST00000200427 2701 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Clp1Q99LI9 Vmn1r52-206ENSMUST00000228385 2769 ntBASIC5.89□□□□□ -1.47
Clp1Q99LI9 Atad2-208ENSMUST00000228783 3472 ntAPPRIS ALT2 BASIC5.89□□□□□ -1.47
Clp1Q99LI9 Fap-209ENSMUST00000174448 2271 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
Clp1Q99LI9 9630002D21Rik-202ENSMUST00000222033 2345 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Clp1Q99LI9 Zfp35-201ENSMUST00000074941 3040 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Clp1Q99LI9 Gm45493-201ENSMUST00000209494 3948 ntBASIC5.88□□□□□ -1.47
Clp1Q99LI9 8430419K02Rik-201ENSMUST00000128654 1870 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Clp1Q99LI9 Dlg1-204ENSMUST00000115196 3418 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Clp1Q99LI9 Asb15-202ENSMUST00000117688 4371 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
Clp1Q99LI9 Gm24429-201ENSMUST00000104076 132 ntBASIC5.88□□□□□ -1.47
Clp1Q99LI9 Gm24160-201ENSMUST00000104594 126 ntBASIC5.88□□□□□ -1.47
Clp1Q99LI9 Cask-202ENSMUST00000115435 726 ntTSL 3 BASIC5.88□□□□□ -1.47
Clp1Q99LI9 Gm12285-201ENSMUST00000117347 233 ntBASIC5.88□□□□□ -1.47
Clp1Q99LI9 Gm11833-201ENSMUST00000118393 853 ntBASIC5.88□□□□□ -1.47
Clp1Q99LI9 Gm12787-201ENSMUST00000119234 396 ntBASIC5.88□□□□□ -1.47
Clp1Q99LI9 Hmgb1-ps6-201ENSMUST00000119503 616 ntBASIC5.88□□□□□ -1.47
Clp1Q99LI9 Gm22480-201ENSMUST00000122568 128 ntBASIC5.88□□□□□ -1.47
Clp1Q99LI9 Rpl39-ps-202ENSMUST00000146505 151 ntBASIC5.88□□□□□ -1.47
Clp1Q99LI9 4933406D12Rik-201ENSMUST00000147212 737 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Clp1Q99LI9 Gm22136-201ENSMUST00000158751 268 ntBASIC5.88□□□□□ -1.47
Clp1Q99LI9 Gm16132-201ENSMUST00000159296 598 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Clp1Q99LI9 Gm23003-201ENSMUST00000179948 107 ntBASIC5.88□□□□□ -1.47
Clp1Q99LI9 Gm34176-201ENSMUST00000192621 474 ntBASIC5.88□□□□□ -1.47
Clp1Q99LI9 Gm18964-201ENSMUST00000193013 563 ntBASIC5.88□□□□□ -1.47
Clp1Q99LI9 Gm43669-201ENSMUST00000198229 436 ntBASIC5.88□□□□□ -1.47
Clp1Q99LI9 Gm44468-201ENSMUST00000199516 105 ntBASIC5.88□□□□□ -1.47
Clp1Q99LI9 Gm45215-201ENSMUST00000206407 395 ntBASIC5.88□□□□□ -1.47
Clp1Q99LI9 Gm45438-201ENSMUST00000210242 564 ntBASIC5.88□□□□□ -1.47
Clp1Q99LI9 Gm5373-201ENSMUST00000212113 1050 ntBASIC5.88□□□□□ -1.47
Clp1Q99LI9 Gm40608-201ENSMUST00000213692 654 ntTSL 3 BASIC5.88□□□□□ -1.47
Clp1Q99LI9 AC153505.2-201ENSMUST00000217741 277 ntBASIC5.88□□□□□ -1.47
Clp1Q99LI9 4930563J15Rik-203ENSMUST00000219796 574 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Clp1Q99LI9 Gm34719-201ENSMUST00000222231 382 ntTSL 5 BASIC5.88□□□□□ -1.47
Clp1Q99LI9 Gm23677-201ENSMUST00000083156 104 ntBASIC5.88□□□□□ -1.47
Clp1Q99LI9 Klra3-201ENSMUST00000088017 984 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Clp1Q99LI9 Gm10799-201ENSMUST00000099666 312 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
Clp1Q99LI9 Gm37195-201ENSMUST00000192006 3018 ntBASIC5.88□□□□□ -1.47
Clp1Q99LI9 Olfr1387-202ENSMUST00000214541 4840 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
Clp1Q99LI9 Akr1c14-201ENSMUST00000041768 2436 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Clp1Q99LI9 Cpb2-201ENSMUST00000022576 1477 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Clp1Q99LI9 Ugt2b1-201ENSMUST00000031183 2573 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Clp1Q99LI9 Cyp2c65-201ENSMUST00000087236 1928 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Clp1Q99LI9 Gm45633-201ENSMUST00000210669 3253 ntBASIC5.87□□□□□ -1.47
Clp1Q99LI9 Rfx4-205ENSMUST00000166696 3332 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Clp1Q99LI9 Trps1-203ENSMUST00000183421 3446 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Clp1Q99LI9 Gm37761-201ENSMUST00000194989 2098 ntBASIC5.87□□□□□ -1.47
Clp1Q99LI9 Tet2-201ENSMUST00000098603 9179 ntAPPRIS P3 TSL 5 BASIC5.87□□□□□ -1.47
Clp1Q99LI9 Olfr1065-201ENSMUST00000213789 2154 ntAPPRIS P1 TSL 3 BASIC5.87□□□□□ -1.47
Clp1Q99LI9 Cfap57-202ENSMUST00000081921 3750 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Clp1Q99LI9 AC132852.1-201ENSMUST00000214683 2324 ntBASIC5.87□□□□□ -1.47
Clp1Q99LI9 Vmn2r109-201ENSMUST00000167093 2577 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Clp1Q99LI9 9230019H11Rik-201ENSMUST00000095874 2801 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Clp1Q99LI9 Zbed6-201ENSMUST00000190574 5007 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
Clp1Q99LI9 Gm38198-201ENSMUST00000191772 3581 ntBASIC5.87□□□□□ -1.47
Clp1Q99LI9 Gm22778-201ENSMUST00000104090 128 ntBASIC5.87□□□□□ -1.47
Clp1Q99LI9 Gm12509-201ENSMUST00000118033 609 ntBASIC5.87□□□□□ -1.47
Clp1Q99LI9 Gm15400-201ENSMUST00000118944 601 ntBASIC5.87□□□□□ -1.47
Clp1Q99LI9 Gm13064-201ENSMUST00000119125 557 ntBASIC5.87□□□□□ -1.47
Clp1Q99LI9 Gm11625-201ENSMUST00000119535 296 ntBASIC5.87□□□□□ -1.47
Clp1Q99LI9 Gm14101-201ENSMUST00000121502 473 ntBASIC5.87□□□□□ -1.47
Clp1Q99LI9 n-R5s48-201ENSMUST00000122482 110 ntBASIC5.87□□□□□ -1.47
Clp1Q99LI9 Gm25293-201ENSMUST00000122792 285 ntBASIC5.87□□□□□ -1.47
Clp1Q99LI9 Rab7b-203ENSMUST00000129905 476 ntTSL 2 BASIC5.87□□□□□ -1.47
Clp1Q99LI9 Gm5353-201ENSMUST00000139800 793 ntBASIC5.87□□□□□ -1.47
Clp1Q99LI9 Gm15340-201ENSMUST00000144984 704 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Clp1Q99LI9 Gm23327-201ENSMUST00000157420 78 ntBASIC5.87□□□□□ -1.47
Clp1Q99LI9 Gm26310-201ENSMUST00000157766 117 ntBASIC5.87□□□□□ -1.47
Clp1Q99LI9 Gm25883-201ENSMUST00000157781 271 ntBASIC5.87□□□□□ -1.47
Clp1Q99LI9 Gm24439-201ENSMUST00000157894 117 ntBASIC5.87□□□□□ -1.47
Clp1Q99LI9 Gm24847-201ENSMUST00000158032 108 ntBASIC5.87□□□□□ -1.47
Clp1Q99LI9 Gm25534-201ENSMUST00000175365 125 ntBASIC5.87□□□□□ -1.47
Clp1Q99LI9 Gm23872-201ENSMUST00000175432 77 ntBASIC5.87□□□□□ -1.47
Clp1Q99LI9 Gm21094-201ENSMUST00000177842 498 ntTSL 5 BASIC5.87□□□□□ -1.47
Clp1Q99LI9 Gm20837-201ENSMUST00000178446 498 ntTSL 5 BASIC5.87□□□□□ -1.47
Clp1Q99LI9 Gm21739-201ENSMUST00000178639 498 ntTSL 5 BASIC5.87□□□□□ -1.47
Clp1Q99LI9 Gm28891-201ENSMUST00000178751 498 ntTSL 5 BASIC5.87□□□□□ -1.47
Clp1Q99LI9 Gm28490-201ENSMUST00000179076 498 ntTSL 5 BASIC5.87□□□□□ -1.47
Clp1Q99LI9 Gm21861-201ENSMUST00000179480 498 ntTSL 5 BASIC5.87□□□□□ -1.47
Clp1Q99LI9 Gm21256-201ENSMUST00000179672 498 ntTSL 5 BASIC5.87□□□□□ -1.47
Clp1Q99LI9 Gm20838-201ENSMUST00000179884 498 ntTSL 5 BASIC5.87□□□□□ -1.47
Clp1Q99LI9 Gm21679-201ENSMUST00000180373 498 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Clp1Q99LI9 Mir7012-201ENSMUST00000183900 64 ntBASIC5.87□□□□□ -1.47
Clp1Q99LI9 Mir6363-201ENSMUST00000184880 114 ntBASIC5.87□□□□□ -1.47
Clp1Q99LI9 Gm18505-201ENSMUST00000187360 790 ntBASIC5.87□□□□□ -1.47
Clp1Q99LI9 Gm21856-201ENSMUST00000187547 696 ntBASIC5.87□□□□□ -1.47
Clp1Q99LI9 Gm19641-201ENSMUST00000188432 417 ntBASIC5.87□□□□□ -1.47
Clp1Q99LI9 Gm19261-201ENSMUST00000189628 539 ntTSL 2 BASIC5.87□□□□□ -1.47
Clp1Q99LI9 Gm21735-201ENSMUST00000190360 696 ntBASIC5.87□□□□□ -1.47
Clp1Q99LI9 1700063A18Rik-201ENSMUST00000190901 356 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Clp1Q99LI9 Olfr277-ps1-201ENSMUST00000205749 285 ntBASIC5.87□□□□□ -1.47
Clp1Q99LI9 Gm44870-201ENSMUST00000207291 357 ntBASIC5.87□□□□□ -1.47
Clp1Q99LI9 Gm18602-201ENSMUST00000209794 851 ntBASIC5.87□□□□□ -1.47
Clp1Q99LI9 AC152979.3-201ENSMUST00000217720 479 ntBASIC5.87□□□□□ -1.47
Clp1Q99LI9 Zfand4-204ENSMUST00000221069 501 ntTSL 3 BASIC5.87□□□□□ -1.47
Retrieved 100 of 76,532 protein–RNA pairs in 62.8 ms