Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Gm44964-201ENSMUST00000207011 273 ntBASIC3.08□□□□□ -1.92
Col6a6Q8C6K9 AC168266.1-201ENSMUST00000216024 226 ntBASIC3.08□□□□□ -1.92
Col6a6Q8C6K9 Olfr943-201ENSMUST00000071617 1079 ntAPPRIS P2 TSL 3 BASIC3.08□□□□□ -1.92
Col6a6Q8C6K9 Sacs-203ENSMUST00000119943 14991 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
Col6a6Q8C6K9 Gm37236-201ENSMUST00000193670 3249 ntBASIC3.08□□□□□ -1.92
Col6a6Q8C6K9 Evi2b-201ENSMUST00000179322 1858 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
Col6a6Q8C6K9 Vmn1r63-201ENSMUST00000075085 2172 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
Col6a6Q8C6K9 Zfp979-201ENSMUST00000037565 2558 ntAPPRIS P1 TSL 2 BASIC3.08□□□□□ -1.92
Col6a6Q8C6K9 Uty-208ENSMUST00000154004 4267 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
Col6a6Q8C6K9 4930419G24Rik-201ENSMUST00000125494 1058 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
Col6a6Q8C6K9 Tarbp2-207ENSMUST00000142114 420 ntTSL 5 BASIC3.08□□□□□ -1.92
Col6a6Q8C6K9 Gm24190-201ENSMUST00000157976 216 ntBASIC3.08□□□□□ -1.92
Col6a6Q8C6K9 Gm17218-201ENSMUST00000165911 410 ntTSL 3 BASIC3.08□□□□□ -1.92
Col6a6Q8C6K9 Skint3-202ENSMUST00000170945 3843 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
Col6a6Q8C6K9 Gm29183-201ENSMUST00000188600 790 ntTSL 5 BASIC3.08□□□□□ -1.92
Col6a6Q8C6K9 4933438B17Rik-202ENSMUST00000196374 576 ntTSL 3 BASIC3.08□□□□□ -1.92
Col6a6Q8C6K9 Gm40155-201ENSMUST00000198291 818 ntTSL 3 BASIC3.08□□□□□ -1.92
Col6a6Q8C6K9 Gm44649-201ENSMUST00000205608 364 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
Col6a6Q8C6K9 Gm7948-201ENSMUST00000212607 844 ntBASIC3.08□□□□□ -1.92
Col6a6Q8C6K9 AC134537.3-201ENSMUST00000220154 503 ntTSL 3 BASIC3.08□□□□□ -1.92
Col6a6Q8C6K9 Zfp951-201ENSMUST00000089906 1356 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
Col6a6Q8C6K9 Ddi1-201ENSMUST00000051706 7114 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
Col6a6Q8C6K9 4932429P05Rik-201ENSMUST00000113958 3093 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
Col6a6Q8C6K9 Olfr1322-202ENSMUST00000217355 3886 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
Col6a6Q8C6K9 Srek1-204ENSMUST00000210489 6330 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
Col6a6Q8C6K9 Gm12793-201ENSMUST00000119268 292 ntBASIC3.07□□□□□ -1.92
Col6a6Q8C6K9 Hba-ps4-201ENSMUST00000128900 447 ntBASIC3.07□□□□□ -1.92
Col6a6Q8C6K9 Scgb2b21-201ENSMUST00000185407 520 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
Col6a6Q8C6K9 Gm28282-201ENSMUST00000186072 186 ntBASIC3.07□□□□□ -1.92
Col6a6Q8C6K9 AC155839.1-201ENSMUST00000200105 147 ntBASIC3.07□□□□□ -1.92
Col6a6Q8C6K9 AC134864.1-201ENSMUST00000226326 511 ntBASIC3.07□□□□□ -1.92
Col6a6Q8C6K9 Olfr1046-201ENSMUST00000099902 951 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
Col6a6Q8C6K9 Gm6367-201ENSMUST00000178646 2464 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
Col6a6Q8C6K9 Pak3-201ENSMUST00000033640 8348 ntAPPRIS ALT1 TSL 1 (best) BASIC3.07□□□□□ -1.92
Col6a6Q8C6K9 Olfr992-202ENSMUST00000213749 2150 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
Col6a6Q8C6K9 Olfr1226-206ENSMUST00000217601 2670 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
Col6a6Q8C6K9 Cd200r3-208ENSMUST00000164007 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC3.07□□□□□ -1.92
Col6a6Q8C6K9 Gm13793-201ENSMUST00000124214 438 ntTSL 2 BASIC3.07□□□□□ -1.92
Col6a6Q8C6K9 Gm43191-201ENSMUST00000140672 704 ntAPPRIS P1 TSL 3 BASIC3.07□□□□□ -1.92
Col6a6Q8C6K9 Gm8906-202ENSMUST00000179375 465 ntAPPRIS ALT2 TSL 5 BASIC3.07□□□□□ -1.92
Col6a6Q8C6K9 Gm24949-201ENSMUST00000183609 215 ntBASIC3.07□□□□□ -1.92
Col6a6Q8C6K9 Gm29218-205ENSMUST00000190846 615 ntBASIC3.07□□□□□ -1.92
Col6a6Q8C6K9 Gm37565-201ENSMUST00000192277 491 ntTSL 3 BASIC3.07□□□□□ -1.92
Col6a6Q8C6K9 9530022L04Rik-201ENSMUST00000194340 310 ntBASIC3.07□□□□□ -1.92
Col6a6Q8C6K9 Gm18384-201ENSMUST00000195974 808 ntBASIC3.07□□□□□ -1.92
Col6a6Q8C6K9 Gm25203-202ENSMUST00000200458 216 ntBASIC3.07□□□□□ -1.92
Col6a6Q8C6K9 AC124537.1-201ENSMUST00000222890 159 ntBASIC3.07□□□□□ -1.92
Col6a6Q8C6K9 Klra7-202ENSMUST00000049304 1075 ntAPPRIS P3 TSL 1 (best) BASIC3.07□□□□□ -1.92
Col6a6Q8C6K9 Gm25203-201ENSMUST00000082842 215 ntBASIC3.07□□□□□ -1.92
Col6a6Q8C6K9 Vmn1r43-201ENSMUST00000089418 1069 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
Col6a6Q8C6K9 Glra3-201ENSMUST00000000275 6508 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
Col6a6Q8C6K9 Gpr34-201ENSMUST00000041708 2088 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
Col6a6Q8C6K9 Olfr1028-201ENSMUST00000080698 3474 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
Col6a6Q8C6K9 Gm43883-201ENSMUST00000204002 3750 ntBASIC3.06□□□□□ -1.92
Col6a6Q8C6K9 Olfr160-201ENSMUST00000104875 930 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
Col6a6Q8C6K9 Gm14684-201ENSMUST00000145722 123 ntTSL 5 BASIC3.06□□□□□ -1.92
Col6a6Q8C6K9 Gm24787-201ENSMUST00000157380 123 ntBASIC3.06□□□□□ -1.92
Col6a6Q8C6K9 Gm24537-201ENSMUST00000157950 102 ntBASIC3.06□□□□□ -1.92
Col6a6Q8C6K9 Gm21244-201ENSMUST00000178447 684 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
Col6a6Q8C6K9 Rpl31-ps21-201ENSMUST00000181182 374 ntBASIC3.06□□□□□ -1.92
Col6a6Q8C6K9 2610044O15Rik8-203ENSMUST00000188757 413 ntTSL 2 BASIC3.06□□□□□ -1.92
Col6a6Q8C6K9 AC154738.4-201ENSMUST00000228310 414 ntBASIC3.06□□□□□ -1.92
Col6a6Q8C6K9 Olfr1205-202ENSMUST00000215929 6149 ntAPPRIS P1 TSL 3 BASIC3.06□□□□□ -1.92
Col6a6Q8C6K9 Vmn2r57-201ENSMUST00000165029 2592 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
Col6a6Q8C6K9 Gm18913-201ENSMUST00000204311 1789 ntBASIC3.06□□□□□ -1.92
Col6a6Q8C6K9 Pde1a-206ENSMUST00000102655 4258 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
Col6a6Q8C6K9 Gm35191-201ENSMUST00000200925 2475 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
Col6a6Q8C6K9 Gm11913-201ENSMUST00000119094 336 ntBASIC3.05□□□□□ -1.92
Col6a6Q8C6K9 Olfr999-ps1-201ENSMUST00000122319 949 ntBASIC3.05□□□□□ -1.92
Col6a6Q8C6K9 Gm26477-201ENSMUST00000122617 323 ntBASIC3.05□□□□□ -1.92
Col6a6Q8C6K9 Gm12226-201ENSMUST00000144172 876 ntBASIC3.05□□□□□ -1.92
Col6a6Q8C6K9 Gm3123-201ENSMUST00000163480 480 ntBASIC3.05□□□□□ -1.92
Col6a6Q8C6K9 Gm20897-201ENSMUST00000185240 923 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
Col6a6Q8C6K9 Gm28954-201ENSMUST00000190031 437 ntTSL 5 BASIC3.05□□□□□ -1.92
Col6a6Q8C6K9 Gm31942-202ENSMUST00000195375 437 ntTSL 5 BASIC3.05□□□□□ -1.92
Col6a6Q8C6K9 AC134333.1-201ENSMUST00000204536 944 ntBASIC3.05□□□□□ -1.92
Col6a6Q8C6K9 AC153544.1-201ENSMUST00000217988 400 ntBASIC3.05□□□□□ -1.92
Col6a6Q8C6K9 AC155929.1-201ENSMUST00000220217 1276 ntBASIC3.05□□□□□ -1.92
Col6a6Q8C6K9 Gm26129-201ENSMUST00000082719 107 ntBASIC3.05□□□□□ -1.92
Col6a6Q8C6K9 Olfr1188-201ENSMUST00000090701 968 ntAPPRIS P2 BASIC3.05□□□□□ -1.92
Col6a6Q8C6K9 Taar4-201ENSMUST00000092660 1044 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
Col6a6Q8C6K9 Olfr1099-201ENSMUST00000099871 1031 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
Col6a6Q8C6K9 Vmn1r34-204ENSMUST00000226999 3048 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
Col6a6Q8C6K9 Gm18719-201ENSMUST00000196696 1413 ntBASIC3.05□□□□□ -1.92
Col6a6Q8C6K9 AC132336.1-201ENSMUST00000222844 1740 ntBASIC3.05□□□□□ -1.92
Col6a6Q8C6K9 4930533N22Rik-201ENSMUST00000206433 3509 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
Col6a6Q8C6K9 Ccdc178-202ENSMUST00000115837 2979 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
Col6a6Q8C6K9 Vmn2r35-201ENSMUST00000169683 2586 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
Col6a6Q8C6K9 C87414-206ENSMUST00000162964 2852 ntAPPRIS P2 TSL 1 (best) BASIC3.05□□□□□ -1.92
Col6a6Q8C6K9 Stag2-202ENSMUST00000115072 5955 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
Col6a6Q8C6K9 Gm43010-201ENSMUST00000195993 2878 ntBASIC3.05□□□□□ -1.92
Col6a6Q8C6K9 Igkv3-7-201ENSMUST00000103399 299 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
Col6a6Q8C6K9 Gm23322-201ENSMUST00000104464 167 ntBASIC3.05□□□□□ -1.92
Col6a6Q8C6K9 Gm13459-201ENSMUST00000121558 646 ntBASIC3.05□□□□□ -1.92
Col6a6Q8C6K9 Gm22011-201ENSMUST00000158790 123 ntBASIC3.05□□□□□ -1.92
Col6a6Q8C6K9 Vmn2r-ps58-201ENSMUST00000173044 242 ntBASIC3.05□□□□□ -1.92
Col6a6Q8C6K9 Gm20672-201ENSMUST00000176605 261 ntBASIC3.05□□□□□ -1.92
Col6a6Q8C6K9 Mir6398-201ENSMUST00000184541 102 ntBASIC3.05□□□□□ -1.92
Col6a6Q8C6K9 Gm5368-201ENSMUST00000189012 589 ntBASIC3.05□□□□□ -1.92
Col6a6Q8C6K9 AC154552.2-201ENSMUST00000223117 794 ntTSL 5 BASIC3.05□□□□□ -1.92
Retrieved 100 of 76,532 protein–RNA pairs in 80.8 ms