Protein–RNA interactions for Protein: Q78JW9

Ubfd1, Ubiquitin domain-containing protein UBFD1, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1Q78JW9 Gm28290-201ENSMUST00000186505 614 ntBASIC4.56□□□□□ -1.68
Ubfd1Q78JW9 Gm28161-201ENSMUST00000186669 614 ntBASIC4.56□□□□□ -1.68
Ubfd1Q78JW9 Gm28847-201ENSMUST00000186778 700 ntBASIC4.56□□□□□ -1.68
Ubfd1Q78JW9 Gm29576-201ENSMUST00000188020 678 ntBASIC4.56□□□□□ -1.68
Ubfd1Q78JW9 Gm28997-201ENSMUST00000188759 429 ntBASIC4.56□□□□□ -1.68
Ubfd1Q78JW9 Gm28749-209ENSMUST00000189599 614 ntBASIC4.56□□□□□ -1.68
Ubfd1Q78JW9 Gm17777-201ENSMUST00000189740 1276 ntBASIC4.56□□□□□ -1.68
Ubfd1Q78JW9 Gm28354-201ENSMUST00000190904 678 ntBASIC4.56□□□□□ -1.68
Ubfd1Q78JW9 Gm33163-201ENSMUST00000194504 614 ntBASIC4.56□□□□□ -1.68
Ubfd1Q78JW9 Gm35667-201ENSMUST00000199122 711 ntTSL 5 BASIC4.56□□□□□ -1.68
Ubfd1Q78JW9 Gm44348-201ENSMUST00000200165 122 ntBASIC4.56□□□□□ -1.68
Ubfd1Q78JW9 Gm43580-201ENSMUST00000202892 284 ntBASIC4.56□□□□□ -1.68
Ubfd1Q78JW9 Ceacam-ps1-202ENSMUST00000206683 630 ntBASIC4.56□□□□□ -1.68
Ubfd1Q78JW9 Gm18414-201ENSMUST00000210858 694 ntBASIC4.56□□□□□ -1.68
Ubfd1Q78JW9 Gm18997-201ENSMUST00000216353 822 ntBASIC4.56□□□□□ -1.68
Ubfd1Q78JW9 AC116726.2-201ENSMUST00000217629 986 ntBASIC4.56□□□□□ -1.68
Ubfd1Q78JW9 AC156952.1-201ENSMUST00000220361 793 ntBASIC4.56□□□□□ -1.68
Ubfd1Q78JW9 AC133498.1-203ENSMUST00000221213 668 ntTSL 3 BASIC4.56□□□□□ -1.68
Ubfd1Q78JW9 3830408C21Rik-203ENSMUST00000224293 822 ntBASIC4.56□□□□□ -1.68
Ubfd1Q78JW9 Vmn1r28-203ENSMUST00000228678 909 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
Ubfd1Q78JW9 Krtap31-2-201ENSMUST00000058761 935 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
Ubfd1Q78JW9 Igsf10-202ENSMUST00000193455 8484 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
Ubfd1Q78JW9 Gm37053-201ENSMUST00000192399 2087 ntBASIC4.56□□□□□ -1.68
Ubfd1Q78JW9 Gm43065-201ENSMUST00000198971 2092 ntBASIC4.56□□□□□ -1.68
Ubfd1Q78JW9 Btbd35f1-201ENSMUST00000178070 1955 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
Ubfd1Q78JW9 Adgrg2-201ENSMUST00000112398 3418 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
Ubfd1Q78JW9 Olfr1323-202ENSMUST00000213463 3717 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
Ubfd1Q78JW9 Psmc6-201ENSMUST00000022380 2234 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
Ubfd1Q78JW9 Vmn1r171-206ENSMUST00000227386 2570 ntAPPRIS ALT2 BASIC4.56□□□□□ -1.68
Ubfd1Q78JW9 Vmn1r171-208ENSMUST00000227866 2566 ntAPPRIS ALT2 BASIC4.56□□□□□ -1.68
Ubfd1Q78JW9 Vmn2r89-201ENSMUST00000159611 2942 ntAPPRIS P4 TSL 1 (best) BASIC4.56□□□□□ -1.68
Ubfd1Q78JW9 Gm14295-202ENSMUST00000132883 2505 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
Ubfd1Q78JW9 Vmn1r49-202ENSMUST00000203791 1356 ntAPPRIS P1 TSL 2 BASIC4.55□□□□□ -1.68
Ubfd1Q78JW9 Gm38407-202ENSMUST00000219221 2391 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
Ubfd1Q78JW9 AC149588.1-201ENSMUST00000228274 3745 ntBASIC4.55□□□□□ -1.68
Ubfd1Q78JW9 Vmn1r32-202ENSMUST00000227014 2661 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
Ubfd1Q78JW9 Olfr424-202ENSMUST00000214751 1642 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
Ubfd1Q78JW9 Trav5-1-201ENSMUST00000103570 343 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
Ubfd1Q78JW9 Gm14125-201ENSMUST00000113442 680 ntBASIC4.55□□□□□ -1.68
Ubfd1Q78JW9 Gm13607-201ENSMUST00000117875 539 ntBASIC4.55□□□□□ -1.68
Ubfd1Q78JW9 Gm14731-201ENSMUST00000119216 376 ntBASIC4.55□□□□□ -1.68
Ubfd1Q78JW9 Gm15030-201ENSMUST00000119804 484 ntBASIC4.55□□□□□ -1.68
Ubfd1Q78JW9 Olfr1081-ps1-201ENSMUST00000120210 945 ntBASIC4.55□□□□□ -1.68
Ubfd1Q78JW9 Gm11216-201ENSMUST00000125240 354 ntTSL 5 BASIC4.55□□□□□ -1.68
Ubfd1Q78JW9 Gm15200-201ENSMUST00000149950 410 ntTSL 2 BASIC4.55□□□□□ -1.68
Ubfd1Q78JW9 Gm23121-201ENSMUST00000157653 173 ntBASIC4.55□□□□□ -1.68
Ubfd1Q78JW9 Gm24689-201ENSMUST00000157760 104 ntBASIC4.55□□□□□ -1.68
Ubfd1Q78JW9 Gm23022-201ENSMUST00000158768 180 ntBASIC4.55□□□□□ -1.68
Ubfd1Q78JW9 Gm17332-201ENSMUST00000165626 87 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
Ubfd1Q78JW9 Trav7-3-201ENSMUST00000177622 402 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
Ubfd1Q78JW9 Gm26992-201ENSMUST00000182089 468 ntAPPRIS P1 TSL 2 BASIC4.55□□□□□ -1.68
Ubfd1Q78JW9 Gm27568-201ENSMUST00000184220 99 ntBASIC4.55□□□□□ -1.68
Ubfd1Q78JW9 Mir6943-201ENSMUST00000185186 66 ntBASIC4.55□□□□□ -1.68
Ubfd1Q78JW9 1700007K09Rik-202ENSMUST00000188899 680 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
Ubfd1Q78JW9 Gm37828-201ENSMUST00000192496 432 ntBASIC4.55□□□□□ -1.68
Ubfd1Q78JW9 Gm37641-201ENSMUST00000193837 239 ntBASIC4.55□□□□□ -1.68
Ubfd1Q78JW9 Gm42643-201ENSMUST00000200504 279 ntBASIC4.55□□□□□ -1.68
Ubfd1Q78JW9 A530021J07Rik-203ENSMUST00000208111 308 ntTSL 2 BASIC4.55□□□□□ -1.68
Ubfd1Q78JW9 Olfr490-201ENSMUST00000210114 945 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
Ubfd1Q78JW9 Gm45857-201ENSMUST00000212207 356 ntBASIC4.55□□□□□ -1.68
Ubfd1Q78JW9 AC112274.2-201ENSMUST00000218436 170 ntBASIC4.55□□□□□ -1.68
Ubfd1Q78JW9 Gm19786-201ENSMUST00000222589 580 ntBASIC4.55□□□□□ -1.68
Ubfd1Q78JW9 Gm12582-201ENSMUST00000030555 697 ntBASIC4.55□□□□□ -1.68
Ubfd1Q78JW9 Olfr744-201ENSMUST00000066457 1105 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
Ubfd1Q78JW9 Olfr682-ps1-201ENSMUST00000071242 934 ntBASIC4.55□□□□□ -1.68
Ubfd1Q78JW9 Ak6-202ENSMUST00000084721 1222 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
Ubfd1Q78JW9 Gm10267-201ENSMUST00000091916 258 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
Ubfd1Q78JW9 CT009696.3-201ENSMUST00000215342 2184 ntTSL 3 BASIC4.55□□□□□ -1.68
Ubfd1Q78JW9 Vps13d-202ENSMUST00000036579 15849 ntAPPRIS P2 TSL 5 BASIC4.55□□□□□ -1.68
Ubfd1Q78JW9 Zfy1-201ENSMUST00000065545 2783 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
Ubfd1Q78JW9 Slc15a2-201ENSMUST00000023616 3993 ntAPPRIS P2 TSL 1 (best) BASIC4.55□□□□□ -1.68
Ubfd1Q78JW9 Olfr944-203ENSMUST00000215306 1523 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
Ubfd1Q78JW9 Gm45555-201ENSMUST00000210028 2602 ntBASIC4.55□□□□□ -1.68
Ubfd1Q78JW9 Gm44847-201ENSMUST00000207104 1991 ntBASIC4.54□□□□□ -1.68
Ubfd1Q78JW9 Gm42559-201ENSMUST00000201811 3532 ntBASIC4.54□□□□□ -1.68
Ubfd1Q78JW9 AC154184.1-201ENSMUST00000224375 1620 ntBASIC4.54□□□□□ -1.68
Ubfd1Q78JW9 Vmn1r217-203ENSMUST00000228656 9767 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
Ubfd1Q78JW9 Olfr685-203ENSMUST00000214712 3326 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
Ubfd1Q78JW9 Gm26384-201ENSMUST00000102183 110 ntBASIC4.54□□□□□ -1.68
Ubfd1Q78JW9 Gm25213-201ENSMUST00000102388 113 ntBASIC4.54□□□□□ -1.68
Ubfd1Q78JW9 Gm22473-201ENSMUST00000104114 132 ntBASIC4.54□□□□□ -1.68
Ubfd1Q78JW9 Sult2a1-201ENSMUST00000108522 1020 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Ubfd1Q78JW9 Gm14322-201ENSMUST00000108942 1074 ntTSL 2 BASIC4.54□□□□□ -1.68
Ubfd1Q78JW9 Gm15752-201ENSMUST00000117427 394 ntBASIC4.54□□□□□ -1.68
Ubfd1Q78JW9 Gm14878-201ENSMUST00000118167 293 ntBASIC4.54□□□□□ -1.68
Ubfd1Q78JW9 Itpa-ps3-201ENSMUST00000119034 395 ntBASIC4.54□□□□□ -1.68
Ubfd1Q78JW9 Gm15012-201ENSMUST00000119176 106 ntBASIC4.54□□□□□ -1.68
Ubfd1Q78JW9 Gm14322-202ENSMUST00000119838 1077 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
Ubfd1Q78JW9 Gm6587-201ENSMUST00000120219 613 ntBASIC4.54□□□□□ -1.68
Ubfd1Q78JW9 Olfr660-ps1-201ENSMUST00000121526 375 ntBASIC4.54□□□□□ -1.68
Ubfd1Q78JW9 Gm22208-201ENSMUST00000122658 110 ntBASIC4.54□□□□□ -1.68
Ubfd1Q78JW9 Gm14418-202ENSMUST00000128657 1077 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
Ubfd1Q78JW9 Gm22555-201ENSMUST00000157801 62 ntBASIC4.54□□□□□ -1.68
Ubfd1Q78JW9 Gm24532-201ENSMUST00000157951 286 ntBASIC4.54□□□□□ -1.68
Ubfd1Q78JW9 Gm25555-201ENSMUST00000158078 111 ntBASIC4.54□□□□□ -1.68
Ubfd1Q78JW9 Vmn2r-ps67-201ENSMUST00000172624 385 ntBASIC4.54□□□□□ -1.68
Ubfd1Q78JW9 Mir7j-201ENSMUST00000184427 122 ntBASIC4.54□□□□□ -1.68
Ubfd1Q78JW9 Gm7870-201ENSMUST00000184467 616 ntBASIC4.54□□□□□ -1.68
Ubfd1Q78JW9 Gm27286-201ENSMUST00000184934 179 ntBASIC4.54□□□□□ -1.68
Ubfd1Q78JW9 1700010H22Rik-202ENSMUST00000187592 1003 ntTSL 5 BASIC4.54□□□□□ -1.68
Retrieved 100 of 76,532 protein–RNA pairs in 62.8 ms