Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 Obox4-ps39-201ENSMUST00000184306 628 ntBASIC5.13□□□□□ -1.59
Scaf4Q6PFF0 Gm27190-201ENSMUST00000184890 542 ntBASIC5.13□□□□□ -1.59
Scaf4Q6PFF0 Ssxb8-202ENSMUST00000185125 559 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
Scaf4Q6PFF0 Gm28094-201ENSMUST00000185262 390 ntBASIC5.13□□□□□ -1.59
Scaf4Q6PFF0 Gm28146-201ENSMUST00000185517 701 ntBASIC5.13□□□□□ -1.59
Scaf4Q6PFF0 Gm28574-201ENSMUST00000185757 699 ntBASIC5.13□□□□□ -1.59
Scaf4Q6PFF0 Gm29134-201ENSMUST00000186579 126 ntBASIC5.13□□□□□ -1.59
Scaf4Q6PFF0 Gm9569-201ENSMUST00000187492 787 ntBASIC5.13□□□□□ -1.59
Scaf4Q6PFF0 Gm28397-201ENSMUST00000187970 699 ntBASIC5.13□□□□□ -1.59
Scaf4Q6PFF0 Gm29065-201ENSMUST00000188786 487 ntTSL 3 BASIC5.13□□□□□ -1.59
Scaf4Q6PFF0 Gm29366-201ENSMUST00000190481 699 ntBASIC5.13□□□□□ -1.59
Scaf4Q6PFF0 Gm28241-201ENSMUST00000190916 235 ntBASIC5.13□□□□□ -1.59
Scaf4Q6PFF0 Gm36891-201ENSMUST00000191995 655 ntBASIC5.13□□□□□ -1.59
Scaf4Q6PFF0 Gm5285-201ENSMUST00000193089 666 ntBASIC5.13□□□□□ -1.59
Scaf4Q6PFF0 Gm6260-202ENSMUST00000197170 921 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Scaf4Q6PFF0 Gm19252-201ENSMUST00000204705 305 ntBASIC5.13□□□□□ -1.59
Scaf4Q6PFF0 Gm45232-201ENSMUST00000207811 162 ntBASIC5.13□□□□□ -1.59
Scaf4Q6PFF0 Gm45588-201ENSMUST00000211213 630 ntBASIC5.13□□□□□ -1.59
Scaf4Q6PFF0 Gm45721-201ENSMUST00000212267 607 ntTSL 3 BASIC5.13□□□□□ -1.59
Scaf4Q6PFF0 LOC665443-201ENSMUST00000212284 796 ntBASIC5.13□□□□□ -1.59
Scaf4Q6PFF0 Gm4510-201ENSMUST00000218265 427 ntBASIC5.13□□□□□ -1.59
Scaf4Q6PFF0 AC132437.1-201ENSMUST00000218308 320 ntBASIC5.13□□□□□ -1.59
Scaf4Q6PFF0 AC165092.2-201ENSMUST00000224681 368 ntBASIC5.13□□□□□ -1.59
Scaf4Q6PFF0 AC165366.1-201ENSMUST00000225905 505 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
Scaf4Q6PFF0 Ear2-201ENSMUST00000074839 719 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Scaf4Q6PFF0 Gm25401-201ENSMUST00000082975 106 ntBASIC5.13□□□□□ -1.59
Scaf4Q6PFF0 Gm23506-201ENSMUST00000083077 107 ntBASIC5.13□□□□□ -1.59
Scaf4Q6PFF0 Gm24928-201ENSMUST00000083399 107 ntBASIC5.13□□□□□ -1.59
Scaf4Q6PFF0 Gm25897-201ENSMUST00000083709 107 ntBASIC5.13□□□□□ -1.59
Scaf4Q6PFF0 Kncn-201ENSMUST00000097918 951 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Scaf4Q6PFF0 Gm10717-202ENSMUST00000099042 669 ntAPPRIS P5 TSL 5 BASIC5.13□□□□□ -1.59
Scaf4Q6PFF0 Olfr705-203ENSMUST00000216009 3085 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
Scaf4Q6PFF0 Gm43011-201ENSMUST00000197897 4433 ntBASIC5.13□□□□□ -1.59
Scaf4Q6PFF0 Gm32592-201ENSMUST00000205146 3124 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Scaf4Q6PFF0 Usp46-201ENSMUST00000068058 4557 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Scaf4Q6PFF0 Vwa5a-201ENSMUST00000001544 4157 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Scaf4Q6PFF0 Ccr9-204ENSMUST00000168910 2888 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Scaf4Q6PFF0 Zfp644-203ENSMUST00000112695 1915 ntTSL 5 BASIC5.13□□□□□ -1.59
Scaf4Q6PFF0 Sirpb1b-201ENSMUST00000091319 1499 ntAPPRIS P2 TSL 1 (best) BASIC5.13□□□□□ -1.59
Scaf4Q6PFF0 AC154227.1-201ENSMUST00000228809 2467 ntBASIC5.13□□□□□ -1.59
Scaf4Q6PFF0 Gm3616-201ENSMUST00000174430 2514 ntBASIC5.13□□□□□ -1.59
Scaf4Q6PFF0 Gm3683-201ENSMUST00000175701 2513 ntBASIC5.13□□□□□ -1.59
Scaf4Q6PFF0 Vmn2r112-201ENSMUST00000097381 2574 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Scaf4Q6PFF0 Olfr344-202ENSMUST00000215879 7675 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
Scaf4Q6PFF0 Nlrp5-203ENSMUST00000108441 3375 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
Scaf4Q6PFF0 Vmn1r213-203ENSMUST00000228031 3367 ntAPPRIS ALT2 BASIC5.12□□□□□ -1.59
Scaf4Q6PFF0 Olfr889-202ENSMUST00000217286 5673 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
Scaf4Q6PFF0 Olfr1191-ps1-201ENSMUST00000120598 4677 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
Scaf4Q6PFF0 Olfr1499-202ENSMUST00000216659 1834 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
Scaf4Q6PFF0 Gm43085-201ENSMUST00000202859 3132 ntBASIC5.12□□□□□ -1.59
Scaf4Q6PFF0 Olfr49-202ENSMUST00000216214 5717 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
Scaf4Q6PFF0 Gm22372-201ENSMUST00000104589 136 ntBASIC5.12□□□□□ -1.59
Scaf4Q6PFF0 Gm22953-201ENSMUST00000116724 101 ntBASIC5.12□□□□□ -1.59
Scaf4Q6PFF0 Gm16100-201ENSMUST00000120489 231 ntBASIC5.12□□□□□ -1.59
Scaf4Q6PFF0 Defb44-ps-201ENSMUST00000126871 219 ntBASIC5.12□□□□□ -1.59
Scaf4Q6PFF0 Hnf1aos2-201ENSMUST00000138108 442 ntTSL 3 BASIC5.12□□□□□ -1.59
Scaf4Q6PFF0 Gm22563-201ENSMUST00000157333 269 ntBASIC5.12□□□□□ -1.59
Scaf4Q6PFF0 Gm23030-201ENSMUST00000158004 273 ntBASIC5.12□□□□□ -1.59
Scaf4Q6PFF0 Gm23896-201ENSMUST00000158109 130 ntBASIC5.12□□□□□ -1.59
Scaf4Q6PFF0 Gm16038-201ENSMUST00000159317 193 ntBASIC5.12□□□□□ -1.59
Scaf4Q6PFF0 Gm3030-201ENSMUST00000163410 516 ntBASIC5.12□□□□□ -1.59
Scaf4Q6PFF0 Gm21917-201ENSMUST00000177831 666 ntTSL 2 BASIC5.12□□□□□ -1.59
Scaf4Q6PFF0 Gm21978-201ENSMUST00000179696 377 ntBASIC5.12□□□□□ -1.59
Scaf4Q6PFF0 Gm29231-201ENSMUST00000179850 319 ntBASIC5.12□□□□□ -1.59
Scaf4Q6PFF0 Gm27976-201ENSMUST00000183635 162 ntBASIC5.12□□□□□ -1.59
Scaf4Q6PFF0 Gm5058-201ENSMUST00000187331 463 ntBASIC5.12□□□□□ -1.59
Scaf4Q6PFF0 1700110C19Rik-202ENSMUST00000188715 717 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Scaf4Q6PFF0 Gm29423-207ENSMUST00000189580 255 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
Scaf4Q6PFF0 Gm17781-201ENSMUST00000195232 649 ntBASIC5.12□□□□□ -1.59
Scaf4Q6PFF0 Pvrig-ps-201ENSMUST00000199472 204 ntBASIC5.12□□□□□ -1.59
Scaf4Q6PFF0 Gm20426-202ENSMUST00000204789 399 ntTSL 5 BASIC5.12□□□□□ -1.59
Scaf4Q6PFF0 AC157085.1-201ENSMUST00000216343 162 ntBASIC5.12□□□□□ -1.59
Scaf4Q6PFF0 AC165164.1-202ENSMUST00000219324 649 ntTSL 3 BASIC5.12□□□□□ -1.59
Scaf4Q6PFF0 AC156950.1-201ENSMUST00000219604 456 ntBASIC5.12□□□□□ -1.59
Scaf4Q6PFF0 Gm40392-201ENSMUST00000220656 562 ntTSL 5 BASIC5.12□□□□□ -1.59
Scaf4Q6PFF0 AC166358.3-201ENSMUST00000221456 181 ntBASIC5.12□□□□□ -1.59
Scaf4Q6PFF0 Gm36501-201ENSMUST00000221857 745 ntBASIC5.12□□□□□ -1.59
Scaf4Q6PFF0 Sval1-201ENSMUST00000031898 615 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Scaf4Q6PFF0 Gm23096-201ENSMUST00000083447 107 ntBASIC5.12□□□□□ -1.59
Scaf4Q6PFF0 Gm24764-201ENSMUST00000083686 199 ntBASIC5.12□□□□□ -1.59
Scaf4Q6PFF0 Ceacam11-201ENSMUST00000094799 1054 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Scaf4Q6PFF0 Gm43130-201ENSMUST00000197721 3907 ntBASIC5.12□□□□□ -1.59
Scaf4Q6PFF0 Olfr1271-202ENSMUST00000216383 6613 ntAPPRIS P1 TSL 3 BASIC5.12□□□□□ -1.59
Scaf4Q6PFF0 Gm15101-201ENSMUST00000178818 1502 ntBASIC5.12□□□□□ -1.59
Scaf4Q6PFF0 Lipn-201ENSMUST00000025682 1502 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Scaf4Q6PFF0 Slco1b2-201ENSMUST00000042812 3307 ntAPPRIS P2 TSL 1 (best) BASIC5.12□□□□□ -1.59
Scaf4Q6PFF0 Mctp1-202ENSMUST00000109589 1653 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Scaf4Q6PFF0 Entpd1-201ENSMUST00000112231 4221 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
Scaf4Q6PFF0 Gm37767-201ENSMUST00000193239 1834 ntBASIC5.11□□□□□ -1.59
Scaf4Q6PFF0 Dctn4-201ENSMUST00000025505 3738 ntAPPRIS P2 TSL 1 (best) BASIC5.11□□□□□ -1.59
Scaf4Q6PFF0 Gm37930-201ENSMUST00000194308 1886 ntBASIC5.11□□□□□ -1.59
Scaf4Q6PFF0 Mmp1a-202ENSMUST00000217651 2011 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Scaf4Q6PFF0 Olfr685-202ENSMUST00000209409 3179 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
Scaf4Q6PFF0 Sult1d1-201ENSMUST00000113314 2420 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Scaf4Q6PFF0 Ighv1-39-201ENSMUST00000103515 351 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Scaf4Q6PFF0 Tcrg-V3-201ENSMUST00000103559 350 ntAPPRIS ALT2 BASIC5.11□□□□□ -1.59
Scaf4Q6PFF0 Traj25-201ENSMUST00000103716 57 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Scaf4Q6PFF0 Mir879-201ENSMUST00000104703 76 ntBASIC5.11□□□□□ -1.59
Scaf4Q6PFF0 Gm12683-201ENSMUST00000117528 415 ntBASIC5.11□□□□□ -1.59
Scaf4Q6PFF0 Gm14681-201ENSMUST00000118047 411 ntBASIC5.11□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 75.2 ms