Protein–RNA interactions for Protein: Q69ZI1

Sh3rf1, E3 ubiquitin-protein ligase SH3RF1, mousemouse

Predictions only

Length 892 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1Q69ZI1 AC116726.1-201ENSMUST00000215028 3497 ntBASIC5.52□□□□□ -1.53
Sh3rf1Q69ZI1 Mapk10-212ENSMUST00000170792 7203 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Sh3rf1Q69ZI1 Gm37789-201ENSMUST00000192862 2889 ntBASIC5.52□□□□□ -1.53
Sh3rf1Q69ZI1 Mir883a-201ENSMUST00000104824 76 ntBASIC5.52□□□□□ -1.53
Sh3rf1Q69ZI1 Gm14163-201ENSMUST00000117342 217 ntBASIC5.52□□□□□ -1.53
Sh3rf1Q69ZI1 Mup-ps18-201ENSMUST00000120145 531 ntBASIC5.52□□□□□ -1.53
Sh3rf1Q69ZI1 Mup-ps19-201ENSMUST00000120390 519 ntBASIC5.52□□□□□ -1.53
Sh3rf1Q69ZI1 Gm14100-201ENSMUST00000125575 651 ntTSL 3 BASIC5.52□□□□□ -1.53
Sh3rf1Q69ZI1 Mir1970-201ENSMUST00000157839 104 ntBASIC5.52□□□□□ -1.53
Sh3rf1Q69ZI1 Scarna6-201ENSMUST00000158656 265 ntBASIC5.52□□□□□ -1.53
Sh3rf1Q69ZI1 Gm17081-201ENSMUST00000167363 478 ntBASIC5.52□□□□□ -1.53
Sh3rf1Q69ZI1 Gm17538-201ENSMUST00000168236 327 ntBASIC5.52□□□□□ -1.53
Sh3rf1Q69ZI1 Gm23872-201ENSMUST00000175432 77 ntBASIC5.52□□□□□ -1.53
Sh3rf1Q69ZI1 Vmn2r-ps116-201ENSMUST00000175997 126 ntBASIC5.52□□□□□ -1.53
Sh3rf1Q69ZI1 Gm2147-201ENSMUST00000193588 639 ntBASIC5.52□□□□□ -1.53
Sh3rf1Q69ZI1 Gm43083-201ENSMUST00000199594 476 ntBASIC5.52□□□□□ -1.53
Sh3rf1Q69ZI1 Gm33248-202ENSMUST00000206954 486 ntTSL 5 BASIC5.52□□□□□ -1.53
Sh3rf1Q69ZI1 4930505K13Rik-201ENSMUST00000208641 546 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Sh3rf1Q69ZI1 Gm44992-209ENSMUST00000209680 1083 ntTSL 5 BASIC5.52□□□□□ -1.53
Sh3rf1Q69ZI1 Gm45590-201ENSMUST00000209715 262 ntBASIC5.52□□□□□ -1.53
Sh3rf1Q69ZI1 AC153977.1-201ENSMUST00000219416 506 ntTSL 5 BASIC5.52□□□□□ -1.53
Sh3rf1Q69ZI1 AC155922.1-201ENSMUST00000220100 373 ntBASIC5.52□□□□□ -1.53
Sh3rf1Q69ZI1 Gm34081-201ENSMUST00000221332 690 ntTSL 5 BASIC5.52□□□□□ -1.53
Sh3rf1Q69ZI1 AC153794.2-201ENSMUST00000222650 550 ntBASIC5.52□□□□□ -1.53
Sh3rf1Q69ZI1 AC158525.1-201ENSMUST00000223806 576 ntBASIC5.52□□□□□ -1.53
Sh3rf1Q69ZI1 Orm3-201ENSMUST00000006687 773 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
Sh3rf1Q69ZI1 Olfr1136-201ENSMUST00000077471 1067 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
Sh3rf1Q69ZI1 Snord42a-201ENSMUST00000082606 65 ntBASIC5.52□□□□□ -1.53
Sh3rf1Q69ZI1 Gm24525-201ENSMUST00000082917 151 ntBASIC5.52□□□□□ -1.53
Sh3rf1Q69ZI1 Olfr859-201ENSMUST00000086480 930 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
Sh3rf1Q69ZI1 Gm14390-201ENSMUST00000117505 1695 ntBASIC5.52□□□□□ -1.53
Sh3rf1Q69ZI1 AC102369.2-201ENSMUST00000219725 1679 ntBASIC5.52□□□□□ -1.53
Sh3rf1Q69ZI1 Alkbh8-204ENSMUST00000211933 7674 ntAPPRIS P2 TSL 1 (best) BASIC5.52□□□□□ -1.53
Sh3rf1Q69ZI1 Eps8-202ENSMUST00000100841 4151 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Sh3rf1Q69ZI1 Olfr874-202ENSMUST00000216982 2632 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
Sh3rf1Q69ZI1 Rgs2-202ENSMUST00000127206 3021 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Sh3rf1Q69ZI1 Rtl9-201ENSMUST00000165829 4104 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Sh3rf1Q69ZI1 Gm37221-201ENSMUST00000194472 3007 ntBASIC5.52□□□□□ -1.53
Sh3rf1Q69ZI1 Gm8267-201ENSMUST00000165003 1751 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
Sh3rf1Q69ZI1 Slc19a3-201ENSMUST00000045560 2974 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Sh3rf1Q69ZI1 Mecom-204ENSMUST00000166001 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
Sh3rf1Q69ZI1 Gm14391-203ENSMUST00000109056 1956 ntTSL 3 BASIC5.51□□□□□ -1.53
Sh3rf1Q69ZI1 Vmn1r209-203ENSMUST00000227265 6550 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
Sh3rf1Q69ZI1 Gm44708-201ENSMUST00000205580 2237 ntBASIC5.51□□□□□ -1.53
Sh3rf1Q69ZI1 Gm42923-201ENSMUST00000198438 2896 ntBASIC5.51□□□□□ -1.53
Sh3rf1Q69ZI1 Spef2-204ENSMUST00000160236 5313 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
Sh3rf1Q69ZI1 AC131586.2-202ENSMUST00000227016 2705 ntBASIC5.51□□□□□ -1.53
Sh3rf1Q69ZI1 Cyp2j12-201ENSMUST00000097972 1675 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
Sh3rf1Q69ZI1 Igkv8-18-201ENSMUST00000103390 395 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
Sh3rf1Q69ZI1 Gm6893-201ENSMUST00000118385 522 ntBASIC5.51□□□□□ -1.53
Sh3rf1Q69ZI1 Gm13510-201ENSMUST00000118659 429 ntBASIC5.51□□□□□ -1.53
Sh3rf1Q69ZI1 Gm7429-201ENSMUST00000118664 348 ntBASIC5.51□□□□□ -1.53
Sh3rf1Q69ZI1 Gm13717-201ENSMUST00000119868 365 ntBASIC5.51□□□□□ -1.53
Sh3rf1Q69ZI1 Serf1-202ENSMUST00000129014 543 ntAPPRIS P1 TSL 3 BASIC5.51□□□□□ -1.53
Sh3rf1Q69ZI1 Gm12256-201ENSMUST00000132394 446 ntTSL 3 BASIC5.51□□□□□ -1.53
Sh3rf1Q69ZI1 Gtsf1-204ENSMUST00000136480 767 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
Sh3rf1Q69ZI1 Gm2020-201ENSMUST00000145242 579 ntBASIC5.51□□□□□ -1.53
Sh3rf1Q69ZI1 Gm22085-201ENSMUST00000158344 110 ntBASIC5.51□□□□□ -1.53
Sh3rf1Q69ZI1 Gm22765-201ENSMUST00000158371 128 ntBASIC5.51□□□□□ -1.53
Sh3rf1Q69ZI1 4430402I18Rik-203ENSMUST00000160542 1057 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Sh3rf1Q69ZI1 Gm9294-201ENSMUST00000165198 789 ntBASIC5.51□□□□□ -1.53
Sh3rf1Q69ZI1 Gm8207-201ENSMUST00000171204 502 ntBASIC5.51□□□□□ -1.53
Sh3rf1Q69ZI1 Pkib-209ENSMUST00000177325 540 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Sh3rf1Q69ZI1 Gm21244-201ENSMUST00000178447 684 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
Sh3rf1Q69ZI1 Gm21856-201ENSMUST00000187547 696 ntBASIC5.51□□□□□ -1.53
Sh3rf1Q69ZI1 Gm21735-201ENSMUST00000190360 696 ntBASIC5.51□□□□□ -1.53
Sh3rf1Q69ZI1 Gm36984-201ENSMUST00000192770 235 ntBASIC5.51□□□□□ -1.53
Sh3rf1Q69ZI1 Ranbp2-ps11-201ENSMUST00000197185 387 ntBASIC5.51□□□□□ -1.53
Sh3rf1Q69ZI1 Mir142-201ENSMUST00000198092 64 ntBASIC5.51□□□□□ -1.53
Sh3rf1Q69ZI1 Gm6105-201ENSMUST00000200580 624 ntBASIC5.51□□□□□ -1.53
Sh3rf1Q69ZI1 Gm44125-201ENSMUST00000203068 448 ntBASIC5.51□□□□□ -1.53
Sh3rf1Q69ZI1 Gm8039-201ENSMUST00000204758 712 ntBASIC5.51□□□□□ -1.53
Sh3rf1Q69ZI1 Gm45169-201ENSMUST00000205717 639 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Sh3rf1Q69ZI1 Gm7990-201ENSMUST00000212126 593 ntBASIC5.51□□□□□ -1.53
Sh3rf1Q69ZI1 AC145731.1-201ENSMUST00000214083 344 ntTSL 5 BASIC5.51□□□□□ -1.53
Sh3rf1Q69ZI1 CT025606.1-201ENSMUST00000218273 324 ntBASIC5.51□□□□□ -1.53
Sh3rf1Q69ZI1 Gm2446-201ENSMUST00000220144 772 ntBASIC5.51□□□□□ -1.53
Sh3rf1Q69ZI1 AC115289.1-201ENSMUST00000224915 522 ntBASIC5.51□□□□□ -1.53
Sh3rf1Q69ZI1 AC166369.1-201ENSMUST00000228126 351 ntBASIC5.51□□□□□ -1.53
Sh3rf1Q69ZI1 n-R5s46-201ENSMUST00000083960 116 ntBASIC5.51□□□□□ -1.53
Sh3rf1Q69ZI1 Wdr17-202ENSMUST00000127511 4668 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
Sh3rf1Q69ZI1 Gm37834-201ENSMUST00000194517 3035 ntBASIC5.51□□□□□ -1.53
Sh3rf1Q69ZI1 Gm9700-201ENSMUST00000193786 1617 ntBASIC5.51□□□□□ -1.53
Sh3rf1Q69ZI1 Tmc1-201ENSMUST00000039500 4073 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Sh3rf1Q69ZI1 Pold3-209ENSMUST00000208670 1716 ntTSL 5 BASIC5.51□□□□□ -1.53
Sh3rf1Q69ZI1 Arpp21-231ENSMUST00000178410 3419 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Sh3rf1Q69ZI1 AC115910.1-201ENSMUST00000221188 4275 ntBASIC5.51□□□□□ -1.53
Sh3rf1Q69ZI1 Dhrs9-201ENSMUST00000063690 4281 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Sh3rf1Q69ZI1 Cnot4-207ENSMUST00000202417 3296 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Sh3rf1Q69ZI1 Gm29488-201ENSMUST00000191427 2402 ntBASIC5.5□□□□□ -1.53
Sh3rf1Q69ZI1 Olfr266-202ENSMUST00000213616 2195 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
Sh3rf1Q69ZI1 Btbd35f2-201ENSMUST00000179991 1949 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
Sh3rf1Q69ZI1 Ktn1-216ENSMUST00000189533 3941 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
Sh3rf1Q69ZI1 Gabra3-202ENSMUST00000114554 1790 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
Sh3rf1Q69ZI1 Gm42860-201ENSMUST00000196492 3991 ntBASIC5.5□□□□□ -1.53
Sh3rf1Q69ZI1 Psd3-205ENSMUST00000098696 11316 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
Sh3rf1Q69ZI1 Psmb6-ps-201ENSMUST00000117520 713 ntBASIC5.5□□□□□ -1.53
Sh3rf1Q69ZI1 Gm15531-201ENSMUST00000118062 252 ntBASIC5.5□□□□□ -1.53
Sh3rf1Q69ZI1 Gm13866-201ENSMUST00000118901 968 ntBASIC5.5□□□□□ -1.53
Sh3rf1Q69ZI1 Gm15660-201ENSMUST00000118997 478 ntBASIC5.5□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 77.6 ms