Protein–RNA interactions for Protein: Q62318

Trim28, Transcription intermediary factor 1-beta, mousemouse

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28Q62318 Adgrg2-203ENSMUST00000112401 4632 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
Trim28Q62318 Adgrg2-205ENSMUST00000112404 4601 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
Trim28Q62318 Adgrg2-206ENSMUST00000112405 4634 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
Trim28Q62318 9430018G01Rik-201ENSMUST00000203260 3758 ntTSL 5 BASIC5.66□□□□□ -1.5
Trim28Q62318 Gm14404-201ENSMUST00000119117 1660 ntBASIC5.66□□□□□ -1.5
Trim28Q62318 Cnot1-201ENSMUST00000068452 8152 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Trim28Q62318 Fbxw15-201ENSMUST00000056745 1495 ntAPPRIS P2 TSL 1 (best) BASIC5.66□□□□□ -1.5
Trim28Q62318 Adam26a-201ENSMUST00000049577 2489 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Trim28Q62318 Gm7233-201ENSMUST00000168619 1761 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Trim28Q62318 Olfr50-203ENSMUST00000217041 1507 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Trim28Q62318 Gm26019-201ENSMUST00000104407 119 ntBASIC5.66□□□□□ -1.5
Trim28Q62318 Gm15659-201ENSMUST00000118881 341 ntBASIC5.66□□□□□ -1.5
Trim28Q62318 Tpt1-ps1-201ENSMUST00000120257 436 ntBASIC5.66□□□□□ -1.5
Trim28Q62318 4930405D11Rik-201ENSMUST00000132218 568 ntTSL 3 BASIC5.66□□□□□ -1.5
Trim28Q62318 Gm23964-201ENSMUST00000157966 107 ntBASIC5.66□□□□□ -1.5
Trim28Q62318 Gm23855-201ENSMUST00000158377 135 ntBASIC5.66□□□□□ -1.5
Trim28Q62318 Gm23505-201ENSMUST00000158989 130 ntBASIC5.66□□□□□ -1.5
Trim28Q62318 Olfr723-201ENSMUST00000164157 1006 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Trim28Q62318 Vmn1r-ps34-201ENSMUST00000174046 943 ntBASIC5.66□□□□□ -1.5
Trim28Q62318 Gm21754-201ENSMUST00000177550 479 ntBASIC5.66□□□□□ -1.5
Trim28Q62318 Nutf2-ps2-201ENSMUST00000179225 384 ntBASIC5.66□□□□□ -1.5
Trim28Q62318 Gm19200-201ENSMUST00000182579 1001 ntBASIC5.66□□□□□ -1.5
Trim28Q62318 Il20-202ENSMUST00000188581 465 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Trim28Q62318 Gm38279-201ENSMUST00000194067 1131 ntBASIC5.66□□□□□ -1.5
Trim28Q62318 1110060G06Rik-201ENSMUST00000200372 499 ntBASIC5.66□□□□□ -1.5
Trim28Q62318 Dnajc5g-202ENSMUST00000201740 581 ntAPPRIS ALT2 TSL 3 BASIC5.66□□□□□ -1.5
Trim28Q62318 Gm44736-201ENSMUST00000205943 667 ntTSL 3 BASIC5.66□□□□□ -1.5
Trim28Q62318 Olfr723-202ENSMUST00000206058 1078 ntAPPRIS P1 TSL 3 BASIC5.66□□□□□ -1.5
Trim28Q62318 Bc1-ps1-201ENSMUST00000208471 318 ntBASIC5.66□□□□□ -1.5
Trim28Q62318 AC145736.1-201ENSMUST00000214661 479 ntBASIC5.66□□□□□ -1.5
Trim28Q62318 2210414F02Rik-201ENSMUST00000215316 396 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Trim28Q62318 AC132384.5-201ENSMUST00000218562 226 ntBASIC5.66□□□□□ -1.5
Trim28Q62318 AC131677.1-201ENSMUST00000218721 535 ntBASIC5.66□□□□□ -1.5
Trim28Q62318 AC079644.1-201ENSMUST00000220586 405 ntBASIC5.66□□□□□ -1.5
Trim28Q62318 Olfr509-201ENSMUST00000061690 1075 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Trim28Q62318 Gm7099-201ENSMUST00000080066 554 ntBASIC5.66□□□□□ -1.5
Trim28Q62318 Olfr875-201ENSMUST00000080634 1004 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Trim28Q62318 n-R5s151-201ENSMUST00000083959 119 ntBASIC5.66□□□□□ -1.5
Trim28Q62318 2210418O10Rik-203ENSMUST00000136719 2314 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Trim28Q62318 Gm42614-201ENSMUST00000198724 1554 ntBASIC5.66□□□□□ -1.5
Trim28Q62318 Stk31-204ENSMUST00000172459 2922 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
Trim28Q62318 Gm42717-201ENSMUST00000197309 3463 ntBASIC5.66□□□□□ -1.5
Trim28Q62318 Gm14308-201ENSMUST00000108990 1628 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
Trim28Q62318 Gm26791-201ENSMUST00000180942 1605 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Trim28Q62318 Zfp644-203ENSMUST00000112695 1915 ntTSL 5 BASIC5.66□□□□□ -1.5
Trim28Q62318 Vmn1r214-203ENSMUST00000227652 3906 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Trim28Q62318 Zc3h14-201ENSMUST00000021399 1430 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Trim28Q62318 Olfr18-203ENSMUST00000212943 2896 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
Trim28Q62318 Olfr376-203ENSMUST00000170592 3211 ntAPPRIS P3 TSL 2 BASIC5.65□□□□□ -1.5
Trim28Q62318 AC153881.3-201ENSMUST00000218494 1561 ntBASIC5.65□□□□□ -1.5
Trim28Q62318 4930503E14Rik-201ENSMUST00000100688 1287 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Trim28Q62318 4933413L06Rik-201ENSMUST00000110292 809 ntTSL 2 BASIC5.65□□□□□ -1.5
Trim28Q62318 Gm7974-201ENSMUST00000117154 408 ntBASIC5.65□□□□□ -1.5
Trim28Q62318 Gm13567-201ENSMUST00000118026 247 ntBASIC5.65□□□□□ -1.5
Trim28Q62318 Gm11746-201ENSMUST00000119843 821 ntBASIC5.65□□□□□ -1.5
Trim28Q62318 Gm7363-201ENSMUST00000119883 399 ntBASIC5.65□□□□□ -1.5
Trim28Q62318 Gm5942-201ENSMUST00000120046 439 ntBASIC5.65□□□□□ -1.5
Trim28Q62318 Amd-ps1-201ENSMUST00000120127 994 ntBASIC5.65□□□□□ -1.5
Trim28Q62318 Gm11398-201ENSMUST00000120330 320 ntBASIC5.65□□□□□ -1.5
Trim28Q62318 Gm6373-201ENSMUST00000121026 360 ntBASIC5.65□□□□□ -1.5
Trim28Q62318 Gm22986-201ENSMUST00000122753 130 ntBASIC5.65□□□□□ -1.5
Trim28Q62318 Gm14211-201ENSMUST00000152250 408 ntTSL 3 BASIC5.65□□□□□ -1.5
Trim28Q62318 Gm22392-201ENSMUST00000177971 107 ntBASIC5.65□□□□□ -1.5
Trim28Q62318 Gm27236-201ENSMUST00000184147 442 ntBASIC5.65□□□□□ -1.5
Trim28Q62318 Rpl23a-ps7-201ENSMUST00000185437 460 ntBASIC5.65□□□□□ -1.5
Trim28Q62318 Gm29638-201ENSMUST00000186106 371 ntTSL 3 BASIC5.65□□□□□ -1.5
Trim28Q62318 Gm28763-201ENSMUST00000188870 166 ntTSL 5 BASIC5.65□□□□□ -1.5
Trim28Q62318 Gm29387-201ENSMUST00000189074 623 ntTSL 3 BASIC5.65□□□□□ -1.5
Trim28Q62318 Gm4035-202ENSMUST00000190684 526 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Trim28Q62318 Gm29579-201ENSMUST00000190820 166 ntTSL 5 BASIC5.65□□□□□ -1.5
Trim28Q62318 Gm43855-201ENSMUST00000197462 507 ntBASIC5.65□□□□□ -1.5
Trim28Q62318 Gm43007-201ENSMUST00000197618 291 ntBASIC5.65□□□□□ -1.5
Trim28Q62318 Smr2-204ENSMUST00000199635 680 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
Trim28Q62318 Gm43171-201ENSMUST00000199882 291 ntBASIC5.65□□□□□ -1.5
Trim28Q62318 Gm44278-201ENSMUST00000204082 312 ntTSL 2 BASIC5.65□□□□□ -1.5
Trim28Q62318 2200007N16Rik-201ENSMUST00000206367 238 ntBASIC5.65□□□□□ -1.5
Trim28Q62318 AC159472.1-201ENSMUST00000218178 463 ntBASIC5.65□□□□□ -1.5
Trim28Q62318 AC105407.3-201ENSMUST00000224161 648 ntBASIC5.65□□□□□ -1.5
Trim28Q62318 AC158392.2-201ENSMUST00000225402 969 ntBASIC5.65□□□□□ -1.5
Trim28Q62318 Klrc1-202ENSMUST00000032271 822 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
Trim28Q62318 Olfr1202-201ENSMUST00000072057 930 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
Trim28Q62318 Rny3-201ENSMUST00000083011 102 ntBASIC5.65□□□□□ -1.5
Trim28Q62318 Gm25582-201ENSMUST00000083412 110 ntBASIC5.65□□□□□ -1.5
Trim28Q62318 Olfr775-201ENSMUST00000097163 939 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
Trim28Q62318 Xkr9-201ENSMUST00000088542 1926 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
Trim28Q62318 6720489N17Rik-202ENSMUST00000201563 2640 ntAPPRIS P2 TSL 1 (best) BASIC5.65□□□□□ -1.51
Trim28Q62318 4930579C12Rik-202ENSMUST00000187015 3676 ntTSL 2 BASIC5.65□□□□□ -1.51
Trim28Q62318 Tmem45a-201ENSMUST00000023435 2701 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
Trim28Q62318 Gm14781-201ENSMUST00000078469 1360 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
Trim28Q62318 Prune2-201ENSMUST00000087689 12512 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
Trim28Q62318 Gm7173-201ENSMUST00000101410 2832 ntAPPRIS P4 TSL 5 BASIC5.65□□□□□ -1.51
Trim28Q62318 Hc-201ENSMUST00000028233 5445 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
Trim28Q62318 0610010F05Rik-201ENSMUST00000043356 4392 ntAPPRIS P2 TSL 5 BASIC5.64□□□□□ -1.51
Trim28Q62318 Zan-204ENSMUST00000164178 16451 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Trim28Q62318 Dnah6-201ENSMUST00000064948 12652 ntAPPRIS P2 TSL 5 BASIC5.64□□□□□ -1.51
Trim28Q62318 Olfr1500-202ENSMUST00000214475 2697 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Trim28Q62318 Elf1-202ENSMUST00000110835 3888 ntAPPRIS P2 TSL 1 (best) BASIC5.64□□□□□ -1.51
Trim28Q62318 Olfr1217-203ENSMUST00000214022 3947 ntAPPRIS P1 TSL 3 BASIC5.64□□□□□ -1.51
Trim28Q62318 Glcci1-206ENSMUST00000162567 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
Trim28Q62318 AC122887.2-201ENSMUST00000219465 1603 ntBASIC5.64□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 76.6 ms