Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 Calcrl-202ENSMUST00000099944 3973 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
Upf3bQ3ULL6 Olfr821-202ENSMUST00000205181 1993 ntAPPRIS P1 TSL 2 BASIC3.94□□□□□ -1.78
Upf3bQ3ULL6 4931412I15Rik-201ENSMUST00000207844 1448 ntBASIC3.94□□□□□ -1.78
Upf3bQ3ULL6 Olfr516-203ENSMUST00000217279 1441 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
Upf3bQ3ULL6 Gm12667-201ENSMUST00000118299 1332 ntBASIC3.94□□□□□ -1.78
Upf3bQ3ULL6 Olfr898-202ENSMUST00000216304 3979 ntAPPRIS ALT2 TSL 5 BASIC3.94□□□□□ -1.78
Upf3bQ3ULL6 Zfp616-201ENSMUST00000074813 5014 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
Upf3bQ3ULL6 Fam111a-204ENSMUST00000151307 3687 ntAPPRIS ALT2 TSL 5 BASIC3.93□□□□□ -1.78
Upf3bQ3ULL6 Aspn-202ENSMUST00000177948 2329 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
Upf3bQ3ULL6 Olfr109-204ENSMUST00000217602 5437 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
Upf3bQ3ULL6 Spc25-201ENSMUST00000005365 1352 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
Upf3bQ3ULL6 Gm37672-201ENSMUST00000192682 4014 ntBASIC3.93□□□□□ -1.78
Upf3bQ3ULL6 Neb-203ENSMUST00000075301 21456 ntAPPRIS ALT2 TSL 5 BASIC3.93□□□□□ -1.78
Upf3bQ3ULL6 Cav1-203ENSMUST00000115454 613 ntTSL 2 BASIC3.93□□□□□ -1.78
Upf3bQ3ULL6 Gm15148-201ENSMUST00000117602 156 ntBASIC3.93□□□□□ -1.78
Upf3bQ3ULL6 Gm13686-201ENSMUST00000122851 350 ntTSL 3 BASIC3.93□□□□□ -1.78
Upf3bQ3ULL6 Junos-205ENSMUST00000130684 614 ntTSL 3 BASIC3.93□□□□□ -1.78
Upf3bQ3ULL6 Gm24745-201ENSMUST00000157840 85 ntBASIC3.93□□□□□ -1.78
Upf3bQ3ULL6 Gm23385-201ENSMUST00000158592 295 ntBASIC3.93□□□□□ -1.78
Upf3bQ3ULL6 Gm5263-201ENSMUST00000163646 601 ntBASIC3.93□□□□□ -1.78
Upf3bQ3ULL6 Ipcef1-209ENSMUST00000170680 1174 ntTSL 5 BASIC3.93□□□□□ -1.78
Upf3bQ3ULL6 Gm22646-201ENSMUST00000175130 115 ntBASIC3.93□□□□□ -1.78
Upf3bQ3ULL6 Gm15143-201ENSMUST00000178180 714 ntBASIC3.93□□□□□ -1.78
Upf3bQ3ULL6 Gm14527-201ENSMUST00000179300 639 ntBASIC3.93□□□□□ -1.78
Upf3bQ3ULL6 Gm29329-201ENSMUST00000189053 621 ntTSL 5 BASIC3.93□□□□□ -1.78
Upf3bQ3ULL6 Gm28331-201ENSMUST00000191102 621 ntTSL 5 BASIC3.93□□□□□ -1.78
Upf3bQ3ULL6 Obox4-ps5-201ENSMUST00000196368 397 ntBASIC3.93□□□□□ -1.78
Upf3bQ3ULL6 Obox4-ps4-201ENSMUST00000196934 397 ntBASIC3.93□□□□□ -1.78
Upf3bQ3ULL6 Gm3143-202ENSMUST00000198364 675 ntTSL 2 BASIC3.93□□□□□ -1.78
Upf3bQ3ULL6 Obox4-ps10-201ENSMUST00000199376 504 ntBASIC3.93□□□□□ -1.78
Upf3bQ3ULL6 Gm18487-201ENSMUST00000215826 878 ntBASIC3.93□□□□□ -1.78
Upf3bQ3ULL6 Olfr1151-201ENSMUST00000061081 927 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
Upf3bQ3ULL6 Gm25205-201ENSMUST00000082841 103 ntBASIC3.93□□□□□ -1.78
Upf3bQ3ULL6 Gm26072-201ENSMUST00000083135 107 ntBASIC3.93□□□□□ -1.78
Upf3bQ3ULL6 Gm22971-201ENSMUST00000083305 97 ntBASIC3.93□□□□□ -1.78
Upf3bQ3ULL6 Ipcef1-202ENSMUST00000086896 1196 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
Upf3bQ3ULL6 Vmn1r203-201ENSMUST00000091729 936 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
Upf3bQ3ULL6 Olfr1066-201ENSMUST00000099885 942 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
Upf3bQ3ULL6 Gm5447-201ENSMUST00000070258 1773 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
Upf3bQ3ULL6 AC147615.2-201ENSMUST00000219876 2154 ntBASIC3.93□□□□□ -1.78
Upf3bQ3ULL6 Lyst-201ENSMUST00000110559 13181 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
Upf3bQ3ULL6 Xiap-201ENSMUST00000026978 6834 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
Upf3bQ3ULL6 Epyc-201ENSMUST00000020094 1723 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
Upf3bQ3ULL6 Gm44078-201ENSMUST00000204652 2646 ntBASIC3.92□□□□□ -1.78
Upf3bQ3ULL6 Olfr1116-202ENSMUST00000216364 9655 ntAPPRIS ALT2 TSL 5 BASIC3.92□□□□□ -1.78
Upf3bQ3ULL6 Zfp945-205ENSMUST00000160457 6497 ntAPPRIS P4 TSL 1 (best) BASIC3.92□□□□□ -1.78
Upf3bQ3ULL6 Gm43320-201ENSMUST00000196047 2916 ntBASIC3.92□□□□□ -1.78
Upf3bQ3ULL6 Olfr1355-201ENSMUST00000078414 3317 ntAPPRIS P1 TSL 2 BASIC3.92□□□□□ -1.78
Upf3bQ3ULL6 Gm40038-201ENSMUST00000197878 1370 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
Upf3bQ3ULL6 Olfr1458-202ENSMUST00000215160 1914 ntAPPRIS P5 TSL 5 BASIC3.92□□□□□ -1.78
Upf3bQ3ULL6 Rbbp8-202ENSMUST00000115861 3523 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
Upf3bQ3ULL6 Gm11406-201ENSMUST00000117418 484 ntBASIC3.92□□□□□ -1.78
Upf3bQ3ULL6 Gm13650-201ENSMUST00000117729 433 ntBASIC3.92□□□□□ -1.78
Upf3bQ3ULL6 Gm13687-201ENSMUST00000119857 282 ntBASIC3.92□□□□□ -1.78
Upf3bQ3ULL6 Gm6461-201ENSMUST00000120015 633 ntBASIC3.92□□□□□ -1.78
Upf3bQ3ULL6 Vmn1r-ps135-201ENSMUST00000120909 595 ntBASIC3.92□□□□□ -1.78
Upf3bQ3ULL6 Gm14435-202ENSMUST00000127687 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
Upf3bQ3ULL6 Gm15860-202ENSMUST00000137257 506 ntTSL 3 BASIC3.92□□□□□ -1.78
Upf3bQ3ULL6 Snora81-201ENSMUST00000157310 178 ntBASIC3.92□□□□□ -1.78
Upf3bQ3ULL6 Gm23123-201ENSMUST00000157648 144 ntBASIC3.92□□□□□ -1.78
Upf3bQ3ULL6 Gm23084-201ENSMUST00000157850 114 ntBASIC3.92□□□□□ -1.78
Upf3bQ3ULL6 Gm24727-201ENSMUST00000158231 144 ntBASIC3.92□□□□□ -1.78
Upf3bQ3ULL6 Gm8653-201ENSMUST00000163096 924 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
Upf3bQ3ULL6 Vmn1r163-201ENSMUST00000164537 924 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
Upf3bQ3ULL6 Vmn1r117-201ENSMUST00000166937 924 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
Upf3bQ3ULL6 Gm6164-201ENSMUST00000169774 924 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
Upf3bQ3ULL6 Vmn1r135-201ENSMUST00000170931 924 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
Upf3bQ3ULL6 Vmn1r143-201ENSMUST00000171622 924 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
Upf3bQ3ULL6 Gm20399-201ENSMUST00000174652 132 ntBASIC3.92□□□□□ -1.78
Upf3bQ3ULL6 Obox4-ps29-201ENSMUST00000175956 1134 ntBASIC3.92□□□□□ -1.78
Upf3bQ3ULL6 Gm37698-201ENSMUST00000192605 463 ntBASIC3.92□□□□□ -1.78
Upf3bQ3ULL6 Gm22897-201ENSMUST00000197860 128 ntBASIC3.92□□□□□ -1.78
Upf3bQ3ULL6 Klra14-ps-202ENSMUST00000203601 1104 ntTSL 5 BASIC3.92□□□□□ -1.78
Upf3bQ3ULL6 Gm45608-201ENSMUST00000210948 389 ntBASIC3.92□□□□□ -1.78
Upf3bQ3ULL6 Gm18387-201ENSMUST00000220333 702 ntBASIC3.92□□□□□ -1.78
Upf3bQ3ULL6 AC117656.3-205ENSMUST00000224606 1205 ntBASIC3.92□□□□□ -1.78
Upf3bQ3ULL6 AC125539.1-202ENSMUST00000226449 670 ntBASIC3.92□□□□□ -1.78
Upf3bQ3ULL6 Sult6b1-201ENSMUST00000042683 839 ntTSL 5 BASIC3.92□□□□□ -1.78
Upf3bQ3ULL6 BC023105-201ENSMUST00000073997 1227 ntBASIC3.92□□□□□ -1.78
Upf3bQ3ULL6 Olfr818-201ENSMUST00000074308 957 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
Upf3bQ3ULL6 Vmn1r81-201ENSMUST00000086232 921 ntAPPRIS P2 BASIC3.92□□□□□ -1.78
Upf3bQ3ULL6 Olfr681-201ENSMUST00000098157 948 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
Upf3bQ3ULL6 Olfr679-201ENSMUST00000098158 952 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
Upf3bQ3ULL6 Olfr583-201ENSMUST00000098211 960 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
Upf3bQ3ULL6 Gm36927-201ENSMUST00000192504 1841 ntBASIC3.92□□□□□ -1.78
Upf3bQ3ULL6 Gm6639-202ENSMUST00000196841 2666 ntTSL 5 BASIC3.92□□□□□ -1.78
Upf3bQ3ULL6 Vmn1r51-207ENSMUST00000227766 4218 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
Upf3bQ3ULL6 Vmn2r59-201ENSMUST00000168489 2598 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
Upf3bQ3ULL6 Gm14308-203ENSMUST00000119149 1458 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
Upf3bQ3ULL6 Gm14434-202ENSMUST00000120959 1458 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
Upf3bQ3ULL6 Gm30292-201ENSMUST00000194198 3000 ntTSL 3 BASIC3.92□□□□□ -1.78
Upf3bQ3ULL6 Vmn1r66-205ENSMUST00000228622 3304 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
Upf3bQ3ULL6 Vmn1r14-202ENSMUST00000227209 6857 ntAPPRIS ALT2 BASIC3.91□□□□□ -1.78
Upf3bQ3ULL6 Olfr679-202ENSMUST00000214328 5184 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
Upf3bQ3ULL6 5033423K11Rik-201ENSMUST00000117311 787 ntBASIC3.91□□□□□ -1.78
Upf3bQ3ULL6 Gm11869-201ENSMUST00000118701 329 ntBASIC3.91□□□□□ -1.78
Upf3bQ3ULL6 Gm15268-201ENSMUST00000118845 352 ntBASIC3.91□□□□□ -1.78
Upf3bQ3ULL6 Gm11704-201ENSMUST00000120031 214 ntBASIC3.91□□□□□ -1.78
Upf3bQ3ULL6 Gm13366-201ENSMUST00000122198 970 ntBASIC3.91□□□□□ -1.78
Upf3bQ3ULL6 Ighv5-8-201ENSMUST00000166255 278 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
Retrieved 100 of 76,532 protein–RNA pairs in 89.4 ms