Protein–RNA interactions for Protein: Q04887

Sox9, Transcription factor SOX-9, mousemouse

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox9Q04887 AC153794.2-201ENSMUST00000222650 550 ntBASIC5.25□□□□□ -1.57
Sox9Q04887 AC154305.1-201ENSMUST00000224443 450 ntBASIC5.25□□□□□ -1.57
Sox9Q04887 AC154358.1-201ENSMUST00000224871 218 ntBASIC5.25□□□□□ -1.57
Sox9Q04887 AC091783.4-201ENSMUST00000224940 611 ntBASIC5.25□□□□□ -1.57
Sox9Q04887 AC154598.1-201ENSMUST00000227079 347 ntBASIC5.25□□□□□ -1.57
Sox9Q04887 Olfr381-201ENSMUST00000078358 936 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
Sox9Q04887 Gm25699-201ENSMUST00000082896 167 ntBASIC5.25□□□□□ -1.57
Sox9Q04887 Gm22265-201ENSMUST00000082947 116 ntBASIC5.25□□□□□ -1.57
Sox9Q04887 Mir199a-2-201ENSMUST00000093618 110 ntBASIC5.25□□□□□ -1.57
Sox9Q04887 Ptprd-217ENSMUST00000174023 4530 ntTSL 5 BASIC5.25□□□□□ -1.57
Sox9Q04887 Ptprd-203ENSMUST00000098005 4542 ntTSL 5 BASIC5.25□□□□□ -1.57
Sox9Q04887 AC124569.3-201ENSMUST00000224860 1621 ntBASIC5.25□□□□□ -1.57
Sox9Q04887 Ktn1-224ENSMUST00000191018 4033 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
Sox9Q04887 Vmn2r24-201ENSMUST00000075095 2565 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
Sox9Q04887 Olfr78-204ENSMUST00000217123 4695 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Sox9Q04887 Fbxw28-201ENSMUST00000112039 1497 ntAPPRIS P4 TSL 1 (best) BASIC5.25□□□□□ -1.57
Sox9Q04887 Trim38-201ENSMUST00000074067 1480 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Sox9Q04887 C87977-203ENSMUST00000105755 1802 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
Sox9Q04887 Olfr360-202ENSMUST00000216706 1816 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
Sox9Q04887 Zfp583-202ENSMUST00000108560 2154 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Sox9Q04887 AC158115.2-201ENSMUST00000221804 5563 ntTSL 5 BASIC5.25□□□□□ -1.57
Sox9Q04887 Olfr376-203ENSMUST00000170592 3211 ntAPPRIS P3 TSL 2 BASIC5.25□□□□□ -1.57
Sox9Q04887 Angel2-201ENSMUST00000027947 3562 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
Sox9Q04887 F9-201ENSMUST00000033477 2734 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Sox9Q04887 Ktn1-203ENSMUST00000185940 3869 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
Sox9Q04887 Slc6a15-202ENSMUST00000179636 3543 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Sox9Q04887 Gm2832-201ENSMUST00000172412 1760 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
Sox9Q04887 Gm42537-201ENSMUST00000198260 2574 ntBASIC5.24□□□□□ -1.57
Sox9Q04887 Gm35629-201ENSMUST00000209684 2241 ntBASIC5.24□□□□□ -1.57
Sox9Q04887 Vmn2r-ps102-201ENSMUST00000222577 2203 ntBASIC5.24□□□□□ -1.57
Sox9Q04887 Tnfrsf26-201ENSMUST00000055723 3107 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Sox9Q04887 Gm37781-201ENSMUST00000194773 3218 ntBASIC5.24□□□□□ -1.57
Sox9Q04887 Olfr387-ps1-201ENSMUST00000134773 1513 ntAPPRIS P1 TSL 3 BASIC5.24□□□□□ -1.57
Sox9Q04887 Nlrp9c-201ENSMUST00000041845 2631 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Sox9Q04887 Olfr1250-203ENSMUST00000215730 4632 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
Sox9Q04887 Cdh10-202ENSMUST00000166873 3176 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Sox9Q04887 Trav10n-201ENSMUST00000103612 343 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
Sox9Q04887 Gm12067-201ENSMUST00000119755 1148 ntBASIC5.24□□□□□ -1.57
Sox9Q04887 Gm13220-201ENSMUST00000121535 508 ntBASIC5.24□□□□□ -1.57
Sox9Q04887 Gm11200-201ENSMUST00000121698 448 ntBASIC5.24□□□□□ -1.57
Sox9Q04887 Hba-ps4-201ENSMUST00000128900 447 ntBASIC5.24□□□□□ -1.57
Sox9Q04887 Gm4724-203ENSMUST00000152941 1198 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Sox9Q04887 Olfr733-201ENSMUST00000163469 994 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
Sox9Q04887 Gm8224-201ENSMUST00000166178 497 ntBASIC5.24□□□□□ -1.57
Sox9Q04887 Gm25748-201ENSMUST00000175487 70 ntBASIC5.24□□□□□ -1.57
Sox9Q04887 Gm22166-201ENSMUST00000178419 121 ntBASIC5.24□□□□□ -1.57
Sox9Q04887 Gm23288-201ENSMUST00000179213 121 ntBASIC5.24□□□□□ -1.57
Sox9Q04887 Tmsb15b2-202ENSMUST00000180194 243 ntAPPRIS P1 TSL 3 BASIC5.24□□□□□ -1.57
Sox9Q04887 Gm27313-201ENSMUST00000183500 142 ntBASIC5.24□□□□□ -1.57
Sox9Q04887 Obox4-ps2-201ENSMUST00000185088 442 ntBASIC5.24□□□□□ -1.57
Sox9Q04887 Vmn1r82-202ENSMUST00000191002 918 ntBASIC5.24□□□□□ -1.57
Sox9Q04887 Gm38221-201ENSMUST00000195146 365 ntBASIC5.24□□□□□ -1.57
Sox9Q04887 Gm36953-201ENSMUST00000195295 268 ntBASIC5.24□□□□□ -1.57
Sox9Q04887 Gm5581-202ENSMUST00000204992 714 ntTSL 3 BASIC5.24□□□□□ -1.57
Sox9Q04887 Gm45870-201ENSMUST00000211269 601 ntBASIC5.24□□□□□ -1.57
Sox9Q04887 AC158807.1-201ENSMUST00000217959 187 ntBASIC5.24□□□□□ -1.57
Sox9Q04887 AC157515.1-201ENSMUST00000220953 450 ntBASIC5.24□□□□□ -1.57
Sox9Q04887 AC140451.2-202ENSMUST00000226156 574 ntBASIC5.24□□□□□ -1.57
Sox9Q04887 Vmn1r54-201ENSMUST00000058039 948 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
Sox9Q04887 Gm37180-201ENSMUST00000195335 2819 ntBASIC5.24□□□□□ -1.57
Sox9Q04887 Vmn1r32-201ENSMUST00000079584 2833 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Sox9Q04887 Gm38278-201ENSMUST00000194715 1365 ntBASIC5.24□□□□□ -1.57
Sox9Q04887 Abcg3-201ENSMUST00000031239 3035 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Sox9Q04887 Il31ra-201ENSMUST00000051756 3680 ntAPPRIS P2 TSL 1 (best) BASIC5.24□□□□□ -1.57
Sox9Q04887 Zfp329-202ENSMUST00000108546 2577 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Sox9Q04887 Olfr1310-202ENSMUST00000213559 4897 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
Sox9Q04887 Gm37639-201ENSMUST00000191623 2785 ntBASIC5.24□□□□□ -1.57
Sox9Q04887 Tnpo1-201ENSMUST00000109399 8445 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Sox9Q04887 Sel1l2-202ENSMUST00000122367 2216 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Sox9Q04887 Nlrp1b-202ENSMUST00000108514 3541 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
Sox9Q04887 Vmn2r34-201ENSMUST00000173459 3616 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
Sox9Q04887 AC154323.3-201ENSMUST00000226927 1660 ntBASIC5.24□□□□□ -1.57
Sox9Q04887 Gabrb1-201ENSMUST00000031122 13737 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Sox9Q04887 Gm44144-201ENSMUST00000203683 1960 ntBASIC5.24□□□□□ -1.57
Sox9Q04887 Lingo2-210ENSMUST00000164772 3562 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Sox9Q04887 Gm45066-201ENSMUST00000207528 2551 ntBASIC5.23□□□□□ -1.57
Sox9Q04887 Olfr1195-202ENSMUST00000213545 2585 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
Sox9Q04887 Gm18163-201ENSMUST00000197877 1643 ntBASIC5.23□□□□□ -1.57
Sox9Q04887 Vps41-201ENSMUST00000072961 3199 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Sox9Q04887 AC126439.1-201ENSMUST00000226772 2104 ntBASIC5.23□□□□□ -1.57
Sox9Q04887 Vav3-202ENSMUST00000106576 3123 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Sox9Q04887 Olfr506-202ENSMUST00000209296 3228 ntAPPRIS P1 TSL 3 BASIC5.23□□□□□ -1.57
Sox9Q04887 Traj7-201ENSMUST00000103733 59 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
Sox9Q04887 Olfr612-201ENSMUST00000104879 972 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
Sox9Q04887 Cep112-203ENSMUST00000106718 839 ntTSL 5 BASIC5.23□□□□□ -1.57
Sox9Q04887 Gm15357-201ENSMUST00000119160 285 ntBASIC5.23□□□□□ -1.57
Sox9Q04887 Olfr337-ps1-201ENSMUST00000120380 456 ntBASIC5.23□□□□□ -1.57
Sox9Q04887 Gm12755-201ENSMUST00000122297 282 ntBASIC5.23□□□□□ -1.57
Sox9Q04887 Gm23959-201ENSMUST00000157208 324 ntBASIC5.23□□□□□ -1.57
Sox9Q04887 Gm17060-201ENSMUST00000172394 824 ntBASIC5.23□□□□□ -1.57
Sox9Q04887 Gm29038-201ENSMUST00000191543 678 ntBASIC5.23□□□□□ -1.57
Sox9Q04887 Gm19777-201ENSMUST00000191940 358 ntBASIC5.23□□□□□ -1.57
Sox9Q04887 Gm37175-201ENSMUST00000192023 587 ntTSL 5 BASIC5.23□□□□□ -1.57
Sox9Q04887 Gm37123-201ENSMUST00000192994 1171 ntBASIC5.23□□□□□ -1.57
Sox9Q04887 Gm5285-201ENSMUST00000193089 666 ntBASIC5.23□□□□□ -1.57
Sox9Q04887 Gm38098-201ENSMUST00000194115 241 ntBASIC5.23□□□□□ -1.57
Sox9Q04887 Mir6516-201ENSMUST00000196236 110 ntBASIC5.23□□□□□ -1.57
Sox9Q04887 Gm5660-201ENSMUST00000197453 1149 ntBASIC5.23□□□□□ -1.57
Sox9Q04887 Mirlet7f-1-201ENSMUST00000198652 89 ntBASIC5.23□□□□□ -1.57
Sox9Q04887 Gm36017-201ENSMUST00000199005 923 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Retrieved 100 of 76,532 protein–RNA pairs in 81.9 ms