Protein–RNA interactions for Protein: P97436

Nkx3-1, Homeobox protein Nkx-3.1, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1P97436 Gm45389-201ENSMUST00000211163 3399 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
Nkx3-1P97436 Obox1-201ENSMUST00000067288 1512 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
Nkx3-1P97436 Zfp458-201ENSMUST00000045969 3488 ntAPPRIS P2 TSL 1 (best) BASIC3.21□□□□□ -1.9
Nkx3-1P97436 Olfr1101-202ENSMUST00000214411 3235 ntAPPRIS P1 TSL 3 BASIC3.21□□□□□ -1.9
Nkx3-1P97436 Gm10375-201ENSMUST00000100692 836 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
Nkx3-1P97436 Gm22590-201ENSMUST00000104247 128 ntBASIC3.21□□□□□ -1.9
Nkx3-1P97436 Sult2a5-201ENSMUST00000108525 1046 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
Nkx3-1P97436 Gm13831-201ENSMUST00000118764 302 ntBASIC3.21□□□□□ -1.9
Nkx3-1P97436 Gm13743-201ENSMUST00000121486 724 ntBASIC3.21□□□□□ -1.9
Nkx3-1P97436 Gm5123-201ENSMUST00000121905 837 ntBASIC3.21□□□□□ -1.9
Nkx3-1P97436 Trim30e-ps1-202ENSMUST00000151294 731 ntBASIC3.21□□□□□ -1.9
Nkx3-1P97436 Gm5755-201ENSMUST00000152394 837 ntBASIC3.21□□□□□ -1.9
Nkx3-1P97436 Gm23602-201ENSMUST00000157258 132 ntBASIC3.21□□□□□ -1.9
Nkx3-1P97436 Gm24244-201ENSMUST00000157317 130 ntBASIC3.21□□□□□ -1.9
Nkx3-1P97436 Gm24730-201ENSMUST00000158228 117 ntBASIC3.21□□□□□ -1.9
Nkx3-1P97436 Gm25369-201ENSMUST00000158848 132 ntBASIC3.21□□□□□ -1.9
Nkx3-1P97436 Gm25835-201ENSMUST00000158917 144 ntBASIC3.21□□□□□ -1.9
Nkx3-1P97436 Gm2389-201ENSMUST00000160487 189 ntBASIC3.21□□□□□ -1.9
Nkx3-1P97436 Mir3070b-201ENSMUST00000175205 89 ntBASIC3.21□□□□□ -1.9
Nkx3-1P97436 Naa60-211ENSMUST00000176625 876 ntTSL 2 BASIC3.21□□□□□ -1.9
Nkx3-1P97436 Gm21638-201ENSMUST00000179473 836 ntBASIC3.21□□□□□ -1.9
Nkx3-1P97436 Scgb2b17-203ENSMUST00000182673 434 ntAPPRIS P2 TSL 2 BASIC3.21□□□□□ -1.9
Nkx3-1P97436 Scgb2b15-201ENSMUST00000182975 434 ntAPPRIS P1 TSL 2 BASIC3.21□□□□□ -1.9
Nkx3-1P97436 Gm29320-201ENSMUST00000185235 615 ntBASIC3.21□□□□□ -1.9
Nkx3-1P97436 Gm28094-201ENSMUST00000185262 390 ntBASIC3.21□□□□□ -1.9
Nkx3-1P97436 Gm29179-202ENSMUST00000186138 615 ntBASIC3.21□□□□□ -1.9
Nkx3-1P97436 Gm29448-201ENSMUST00000186675 615 ntBASIC3.21□□□□□ -1.9
Nkx3-1P97436 Gm29314-201ENSMUST00000186800 615 ntBASIC3.21□□□□□ -1.9
Nkx3-1P97436 Gm28253-202ENSMUST00000187971 615 ntBASIC3.21□□□□□ -1.9
Nkx3-1P97436 Gm29169-201ENSMUST00000189835 615 ntBASIC3.21□□□□□ -1.9
Nkx3-1P97436 Gm20736-203ENSMUST00000190282 836 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
Nkx3-1P97436 Obox4-ps24-201ENSMUST00000197686 540 ntBASIC3.21□□□□□ -1.9
Nkx3-1P97436 Gm42526-201ENSMUST00000198956 393 ntBASIC3.21□□□□□ -1.9
Nkx3-1P97436 Gm43101-202ENSMUST00000201733 488 ntTSL 2 BASIC3.21□□□□□ -1.9
Nkx3-1P97436 Gm32381-201ENSMUST00000203192 476 ntBASIC3.21□□□□□ -1.9
Nkx3-1P97436 Olfr1295-202ENSMUST00000207786 1043 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
Nkx3-1P97436 Olfr1486-ps1-201ENSMUST00000208835 220 ntBASIC3.21□□□□□ -1.9
Nkx3-1P97436 Gm45420-201ENSMUST00000211243 425 ntBASIC3.21□□□□□ -1.9
Nkx3-1P97436 Gm45789-201ENSMUST00000213038 364 ntBASIC3.21□□□□□ -1.9
Nkx3-1P97436 CAAA01216754.4-202ENSMUST00000215276 610 ntBASIC3.21□□□□□ -1.9
Nkx3-1P97436 CT025680.1-201ENSMUST00000217375 375 ntBASIC3.21□□□□□ -1.9
Nkx3-1P97436 Gm21007-201ENSMUST00000221024 326 ntBASIC3.21□□□□□ -1.9
Nkx3-1P97436 Gm9309-201ENSMUST00000223537 546 ntBASIC3.21□□□□□ -1.9
Nkx3-1P97436 AL645546.1-201ENSMUST00000225001 189 ntBASIC3.21□□□□□ -1.9
Nkx3-1P97436 Gm28044-201ENSMUST00000044819 551 ntAPPRIS P1 TSL 3 BASIC3.21□□□□□ -1.9
Nkx3-1P97436 Hamp-201ENSMUST00000062620 410 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
Nkx3-1P97436 Gm45809-201ENSMUST00000211661 3894 ntBASIC3.21□□□□□ -1.9
Nkx3-1P97436 Olfr1274-ps-202ENSMUST00000216111 3395 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
Nkx3-1P97436 Serpinb9f-201ENSMUST00000075515 1912 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
Nkx3-1P97436 Olfr1454-204ENSMUST00000217568 4215 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
Nkx3-1P97436 Vmn1r51-207ENSMUST00000227766 4218 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
Nkx3-1P97436 Olfr575-203ENSMUST00000216420 3500 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
Nkx3-1P97436 Gm45304-201ENSMUST00000210303 2828 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
Nkx3-1P97436 Gm14696-201ENSMUST00000144294 3976 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
Nkx3-1P97436 Olfr1369-ps1-202ENSMUST00000213326 3707 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
Nkx3-1P97436 Olfr125-202ENSMUST00000213857 3835 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
Nkx3-1P97436 Olfr112-201ENSMUST00000085548 3103 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
Nkx3-1P97436 Btbd35f5-201ENSMUST00000179538 1950 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
Nkx3-1P97436 Xiap-201ENSMUST00000026978 6834 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
Nkx3-1P97436 Olfr1163-202ENSMUST00000215268 1611 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
Nkx3-1P97436 Gm12467-201ENSMUST00000117625 745 ntBASIC3.2□□□□□ -1.9
Nkx3-1P97436 Cbx3-ps3-201ENSMUST00000118595 550 ntBASIC3.2□□□□□ -1.9
Nkx3-1P97436 Gm15026-201ENSMUST00000119219 458 ntBASIC3.2□□□□□ -1.9
Nkx3-1P97436 4930406D18Rik-202ENSMUST00000152827 657 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
Nkx3-1P97436 Grip1os2-201ENSMUST00000153898 722 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
Nkx3-1P97436 Gm20399-201ENSMUST00000174652 132 ntBASIC3.2□□□□□ -1.9
Nkx3-1P97436 Gm26460-201ENSMUST00000175061 126 ntBASIC3.2□□□□□ -1.9
Nkx3-1P97436 Gm27903-201ENSMUST00000175482 126 ntBASIC3.2□□□□□ -1.9
Nkx3-1P97436 Obox4-ps29-201ENSMUST00000175956 1134 ntBASIC3.2□□□□□ -1.9
Nkx3-1P97436 Obox4-ps1-201ENSMUST00000184446 700 ntBASIC3.2□□□□□ -1.9
Nkx3-1P97436 Gm29139-201ENSMUST00000185794 248 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
Nkx3-1P97436 Gm28598-201ENSMUST00000186490 615 ntBASIC3.2□□□□□ -1.9
Nkx3-1P97436 Gm8641-201ENSMUST00000186995 826 ntBASIC3.2□□□□□ -1.9
Nkx3-1P97436 Gm28784-201ENSMUST00000187817 1011 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
Nkx3-1P97436 Gm29268-201ENSMUST00000188669 615 ntBASIC3.2□□□□□ -1.9
Nkx3-1P97436 Tardbp-223ENSMUST00000189048 1096 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
Nkx3-1P97436 Gm29218-205ENSMUST00000190846 615 ntBASIC3.2□□□□□ -1.9
Nkx3-1P97436 Gm28978-201ENSMUST00000191120 615 ntBASIC3.2□□□□□ -1.9
Nkx3-1P97436 Gm37172-201ENSMUST00000191926 615 ntBASIC3.2□□□□□ -1.9
Nkx3-1P97436 Gm18403-201ENSMUST00000192907 529 ntBASIC3.2□□□□□ -1.9
Nkx3-1P97436 Gm3143-202ENSMUST00000198364 675 ntTSL 2 BASIC3.2□□□□□ -1.9
Nkx3-1P97436 Igkv11-118-201ENSMUST00000199448 346 ntBASIC3.2□□□□□ -1.9
Nkx3-1P97436 Gm44824-201ENSMUST00000207021 229 ntBASIC3.2□□□□□ -1.9
Nkx3-1P97436 Gm3690-201ENSMUST00000211341 262 ntBASIC3.2□□□□□ -1.9
Nkx3-1P97436 AC153971.2-201ENSMUST00000214553 777 ntBASIC3.2□□□□□ -1.9
Nkx3-1P97436 Olfr175-ps1-202ENSMUST00000215069 1201 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
Nkx3-1P97436 Gm18903-201ENSMUST00000215343 480 ntBASIC3.2□□□□□ -1.9
Nkx3-1P97436 AC171204.1-201ENSMUST00000215867 975 ntTSL 5 BASIC3.2□□□□□ -1.9
Nkx3-1P97436 AC153544.1-201ENSMUST00000217988 400 ntBASIC3.2□□□□□ -1.9
Nkx3-1P97436 AC134528.1-201ENSMUST00000219156 387 ntTSL 2 BASIC3.2□□□□□ -1.9
Nkx3-1P97436 Gm35865-201ENSMUST00000220180 287 ntTSL 3 BASIC3.2□□□□□ -1.9
Nkx3-1P97436 1700105G05Rik-201ENSMUST00000222238 411 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
Nkx3-1P97436 Gm40884-201ENSMUST00000223505 541 ntTSL 3 BASIC3.2□□□□□ -1.9
Nkx3-1P97436 AC158981.3-201ENSMUST00000226844 1024 ntBASIC3.2□□□□□ -1.9
Nkx3-1P97436 Olfr943-201ENSMUST00000071617 1079 ntAPPRIS P2 TSL 3 BASIC3.2□□□□□ -1.9
Nkx3-1P97436 Olfr818-201ENSMUST00000074308 957 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
Nkx3-1P97436 Gm10282-201ENSMUST00000075602 1151 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
Nkx3-1P97436 Mup21-201ENSMUST00000077719 677 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
Nkx3-1P97436 Olfr787-201ENSMUST00000077836 939 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
Nkx3-1P97436 Olfr175-ps1-201ENSMUST00000079955 1169 ntAPPRIS P1 TSL 2 BASIC3.2□□□□□ -1.9
Retrieved 100 of 76,532 protein–RNA pairs in 126 ms