Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Gm17155-201ENSMUST00000165969 473 ntBASIC2.4□□□□□ -2.03
PrkdcP97313 Gm23963-201ENSMUST00000179603 77 ntBASIC2.4□□□□□ -2.03
PrkdcP97313 Gm46436-201ENSMUST00000221851 1294 ntBASIC2.4□□□□□ -2.03
PrkdcP97313 Gabrb2-205ENSMUST00000192403 1539 ntAPPRIS ALT1 TSL 1 (best) BASIC2.4□□□□□ -2.03
PrkdcP97313 5830405F06Rik-201ENSMUST00000192753 1755 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
PrkdcP97313 Slc22a22-202ENSMUST00000110196 2368 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
PrkdcP97313 Gm4788-202ENSMUST00000111986 2935 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
PrkdcP97313 Herc2-203ENSMUST00000205303 14403 ntAPPRIS ALT2 TSL 5 BASIC2.4□□□□□ -2.03
PrkdcP97313 Gm26145-201ENSMUST00000104476 127 ntBASIC2.4□□□□□ -2.03
PrkdcP97313 Gm7071-201ENSMUST00000120458 462 ntBASIC2.4□□□□□ -2.03
PrkdcP97313 Gm11260-201ENSMUST00000121163 942 ntBASIC2.4□□□□□ -2.03
PrkdcP97313 Gm16353-201ENSMUST00000159458 1223 ntBASIC2.4□□□□□ -2.03
PrkdcP97313 Gm20672-201ENSMUST00000176605 261 ntBASIC2.4□□□□□ -2.03
PrkdcP97313 Clec5a-204ENSMUST00000177178 665 ntAPPRIS ALT2 TSL 1 (best) BASIC2.4□□□□□ -2.03
PrkdcP97313 1700020G17Rik-202ENSMUST00000190237 739 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
PrkdcP97313 Gm43368-201ENSMUST00000200638 409 ntBASIC2.4□□□□□ -2.03
PrkdcP97313 Tnpo1-201ENSMUST00000109399 8445 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
PrkdcP97313 Olfr921-203ENSMUST00000217114 4120 ntAPPRIS P1 TSL 2 BASIC2.4□□□□□ -2.03
PrkdcP97313 Olfr1101-202ENSMUST00000214411 3235 ntAPPRIS P1 TSL 3 BASIC2.4□□□□□ -2.03
PrkdcP97313 Rd3l-203ENSMUST00000189759 1427 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
PrkdcP97313 Zfp945-205ENSMUST00000160457 6497 ntAPPRIS P4 TSL 1 (best) BASIC2.39□□□□□ -2.03
PrkdcP97313 AC131687.1-201ENSMUST00000225931 5446 ntBASIC2.39□□□□□ -2.03
PrkdcP97313 Olfr1180-203ENSMUST00000217320 2107 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
PrkdcP97313 Ahnak-202ENSMUST00000092956 18099 ntAPPRIS P3 TSL 1 (best) BASIC2.39□□□□□ -2.03
PrkdcP97313 Mapk10-201ENSMUST00000086854 6630 ntAPPRIS ALT1 TSL 1 (best) BASIC2.39□□□□□ -2.03
PrkdcP97313 Myo3a-201ENSMUST00000044749 5082 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
PrkdcP97313 Vmn2r82-201ENSMUST00000170596 3045 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
PrkdcP97313 Clock-204ENSMUST00000202122 5508 ntAPPRIS ALT2 TSL 1 (best) BASIC2.39□□□□□ -2.03
PrkdcP97313 Ttc37-205ENSMUST00000224386 6976 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
PrkdcP97313 Olfr68-202ENSMUST00000216811 4093 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
PrkdcP97313 Gm9427-201ENSMUST00000116187 651 ntBASIC2.39□□□□□ -2.03
PrkdcP97313 Gm14714-201ENSMUST00000119743 439 ntBASIC2.39□□□□□ -2.03
PrkdcP97313 Gm3757-201ENSMUST00000125878 675 ntBASIC2.39□□□□□ -2.03
PrkdcP97313 Gm14161-201ENSMUST00000137020 339 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
PrkdcP97313 Gm14618-201ENSMUST00000149377 740 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
PrkdcP97313 Gm4207-201ENSMUST00000173144 960 ntBASIC2.39□□□□□ -2.03
PrkdcP97313 Gm8220-203ENSMUST00000177877 381 ntTSL 5 BASIC2.39□□□□□ -2.03
PrkdcP97313 Gm8247-202ENSMUST00000178759 375 ntAPPRIS ALT2 TSL 5 BASIC2.39□□□□□ -2.03
PrkdcP97313 CT009754.1-201ENSMUST00000223489 558 ntTSL 3 BASIC2.39□□□□□ -2.03
PrkdcP97313 AC140451.2-202ENSMUST00000226156 574 ntBASIC2.39□□□□□ -2.03
PrkdcP97313 Olfr1173-201ENSMUST00000099830 2268 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
PrkdcP97313 Zfp808-201ENSMUST00000099449 2571 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
PrkdcP97313 Gm29666-201ENSMUST00000189185 8038 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
PrkdcP97313 Gm37041-201ENSMUST00000195873 3853 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
PrkdcP97313 Gm14569-204ENSMUST00000169499 5181 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
PrkdcP97313 Syt14-205ENSMUST00000215093 9274 ntTSL 5 BASIC2.39□□□□□ -2.03
PrkdcP97313 Gm42478-201ENSMUST00000199252 1467 ntBASIC2.39□□□□□ -2.03
PrkdcP97313 Gm37848-201ENSMUST00000195288 3103 ntBASIC2.39□□□□□ -2.03
PrkdcP97313 Lrrc37a-201ENSMUST00000153273 9647 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
PrkdcP97313 Tspan7-202ENSMUST00000115526 7067 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
PrkdcP97313 Hif1a-202ENSMUST00000110461 4385 ntAPPRIS ALT2 TSL 1 (best) BASIC2.39□□□□□ -2.03
PrkdcP97313 Gm42520-201ENSMUST00000199642 1502 ntBASIC2.39□□□□□ -2.03
PrkdcP97313 Mpeg1-201ENSMUST00000081035 4335 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
PrkdcP97313 BB287469-201ENSMUST00000110149 1851 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
PrkdcP97313 Gm4027-201ENSMUST00000164838 1850 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
PrkdcP97313 Nlrp9a-201ENSMUST00000071780 3125 ntAPPRIS ALT2 TSL 5 BASIC2.39□□□□□ -2.03
PrkdcP97313 Ccdc178-202ENSMUST00000115837 2979 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
PrkdcP97313 Eda2r-201ENSMUST00000037353 4752 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
PrkdcP97313 Trav7-3-201ENSMUST00000177622 402 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
PrkdcP97313 Trav7d-3-201ENSMUST00000179789 402 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
PrkdcP97313 Gm19694-201ENSMUST00000192364 505 ntBASIC2.39□□□□□ -2.03
PrkdcP97313 Gm22970-201ENSMUST00000083304 186 ntBASIC2.39□□□□□ -2.03
PrkdcP97313 Tas2r115-201ENSMUST00000095394 1033 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
PrkdcP97313 Ppef1-201ENSMUST00000071204 2483 ntAPPRIS P1 TSL 2 BASIC2.39□□□□□ -2.03
PrkdcP97313 Hrnr-201ENSMUST00000090856 10656 ntAPPRIS P2 TSL 5 BASIC2.39□□□□□ -2.03
PrkdcP97313 Gm10287-202ENSMUST00000180599 4059 ntBASIC2.39□□□□□ -2.03
PrkdcP97313 Gm42949-201ENSMUST00000197054 2202 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
PrkdcP97313 Gm23230-201ENSMUST00000157298 133 ntBASIC2.39□□□□□ -2.03
PrkdcP97313 Zfp987-201ENSMUST00000091878 2798 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
PrkdcP97313 AC154368.2-201ENSMUST00000222334 1724 ntBASIC2.39□□□□□ -2.03
PrkdcP97313 Slfn8-203ENSMUST00000108152 3083 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
PrkdcP97313 Fat1-203ENSMUST00000189017 14651 ntTSL 5 BASIC2.38□□□□□ -2.03
PrkdcP97313 Olfr1263-202ENSMUST00000214382 4400 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
PrkdcP97313 Creb5-212ENSMUST00000205120 7482 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
PrkdcP97313 Mier1-201ENSMUST00000030247 4703 ntAPPRIS P3 TSL 1 (best) BASIC2.38□□□□□ -2.03
PrkdcP97313 Gm29414-201ENSMUST00000185379 448 ntTSL 3 BASIC2.38□□□□□ -2.03
PrkdcP97313 Gm37701-201ENSMUST00000192947 1100 ntBASIC2.38□□□□□ -2.03
PrkdcP97313 Gm19620-201ENSMUST00000195972 434 ntBASIC2.38□□□□□ -2.03
PrkdcP97313 Gm6303-201ENSMUST00000210123 471 ntBASIC2.38□□□□□ -2.03
PrkdcP97313 Olfr993-201ENSMUST00000099926 945 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
PrkdcP97313 Matr3-201ENSMUST00000166793 6262 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
PrkdcP97313 Pola1-201ENSMUST00000006856 5346 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
PrkdcP97313 Abcb11-204ENSMUST00000180142 4963 ntAPPRIS ALT2 TSL 5 BASIC2.38□□□□□ -2.03
PrkdcP97313 Mmrn1-201ENSMUST00000129603 4477 ntAPPRIS P3 TSL 1 (best) BASIC2.38□□□□□ -2.03
PrkdcP97313 Epha7-203ENSMUST00000108191 6615 ntAPPRIS ALT1 TSL 1 (best) BASIC2.38□□□□□ -2.03
PrkdcP97313 Mtus1-205ENSMUST00000118835 6426 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
PrkdcP97313 Gm5754-201ENSMUST00000118774 892 ntBASIC2.38□□□□□ -2.03
PrkdcP97313 Gm17063-201ENSMUST00000168135 456 ntBASIC2.38□□□□□ -2.03
PrkdcP97313 Gm7870-201ENSMUST00000184467 616 ntBASIC2.38□□□□□ -2.03
PrkdcP97313 Mir215-201ENSMUST00000083628 112 ntBASIC2.38□□□□□ -2.03
PrkdcP97313 n-R5s182-201ENSMUST00000083889 107 ntBASIC2.38□□□□□ -2.03
PrkdcP97313 Abcc9-201ENSMUST00000073173 7433 ntAPPRIS ALT2 TSL 5 BASIC2.38□□□□□ -2.03
PrkdcP97313 Gm42996-201ENSMUST00000196116 1636 ntBASIC2.38□□□□□ -2.03
PrkdcP97313 Gm37064-201ENSMUST00000193851 2231 ntBASIC2.38□□□□□ -2.03
PrkdcP97313 Olfr201-202ENSMUST00000216834 3706 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
PrkdcP97313 Cfhr1-201ENSMUST00000023965 1793 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
PrkdcP97313 Vmn1r220-203ENSMUST00000227679 7868 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
PrkdcP97313 Vmn1r220-206ENSMUST00000228854 7854 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
PrkdcP97313 Olfr1050-ps1-201ENSMUST00000119802 947 ntBASIC2.38□□□□□ -2.03
PrkdcP97313 Ubl5-209ENSMUST00000161882 489 ntTSL 3 BASIC2.38□□□□□ -2.03
Retrieved 100 of 76,532 protein–RNA pairs in 76.6 ms