Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 n-R5s179-201ENSMUST00000122564 118 ntBASIC4.38□□□□□ -1.71
NcanP55066 Gm11339-201ENSMUST00000154766 490 ntTSL 5 BASIC4.38□□□□□ -1.71
NcanP55066 Gm24773-201ENSMUST00000158513 99 ntBASIC4.38□□□□□ -1.71
NcanP55066 Gm22664-201ENSMUST00000158719 105 ntBASIC4.38□□□□□ -1.71
NcanP55066 Gm17164-201ENSMUST00000169013 506 ntBASIC4.38□□□□□ -1.71
NcanP55066 Gm20476-201ENSMUST00000172644 492 ntTSL 2 BASIC4.38□□□□□ -1.71
NcanP55066 Gm25026-201ENSMUST00000175017 188 ntBASIC4.38□□□□□ -1.71
NcanP55066 Gm15099-201ENSMUST00000179833 573 ntTSL 5 BASIC4.38□□□□□ -1.71
NcanP55066 Mpc1-ps-201ENSMUST00000181662 330 ntBASIC4.38□□□□□ -1.71
NcanP55066 Gm33571-201ENSMUST00000193271 657 ntBASIC4.38□□□□□ -1.71
NcanP55066 Csn1s2a-202ENSMUST00000196585 762 ntAPPRIS ALT2 TSL 3 BASIC4.38□□□□□ -1.71
NcanP55066 Gm44332-201ENSMUST00000203712 433 ntBASIC4.38□□□□□ -1.71
NcanP55066 Gm44092-201ENSMUST00000204470 258 ntBASIC4.38□□□□□ -1.71
NcanP55066 Gm19908-201ENSMUST00000204684 391 ntBASIC4.38□□□□□ -1.71
NcanP55066 Gm44966-201ENSMUST00000208096 157 ntBASIC4.38□□□□□ -1.71
NcanP55066 AC164629.1-201ENSMUST00000220250 1113 ntBASIC4.38□□□□□ -1.71
NcanP55066 AC174776.1-201ENSMUST00000221509 405 ntBASIC4.38□□□□□ -1.71
NcanP55066 AC174776.2-201ENSMUST00000222561 405 ntBASIC4.38□□□□□ -1.71
NcanP55066 AC164597.2-201ENSMUST00000226738 603 ntBASIC4.38□□□□□ -1.71
NcanP55066 AC158981.3-201ENSMUST00000226844 1024 ntBASIC4.38□□□□□ -1.71
NcanP55066 Tmsb15a-201ENSMUST00000073674 299 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
NcanP55066 Csn1s2a-201ENSMUST00000076379 920 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
NcanP55066 Gm25200-201ENSMUST00000083094 130 ntBASIC4.38□□□□□ -1.71
NcanP55066 Mir99a-201ENSMUST00000083596 65 ntBASIC4.38□□□□□ -1.71
NcanP55066 Vmn2r7-202ENSMUST00000161972 3583 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
NcanP55066 Myo3a-201ENSMUST00000044749 5082 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
NcanP55066 Ulbp1-203ENSMUST00000218087 5959 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
NcanP55066 Steap2-209ENSMUST00000164219 10089 ntAPPRIS P1 TSL 3 BASIC4.38□□□□□ -1.71
NcanP55066 Lpp-202ENSMUST00000078988 15440 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
NcanP55066 Olfr291-202ENSMUST00000217039 3471 ntAPPRIS ALT2 TSL 2 BASIC4.38□□□□□ -1.71
NcanP55066 Olfr365-202ENSMUST00000213969 5333 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
NcanP55066 Gm6710-202ENSMUST00000109012 1665 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
NcanP55066 Gm14391-206ENSMUST00000165892 1665 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
NcanP55066 AC173482.1-201ENSMUST00000224494 3815 ntBASIC4.38□□□□□ -1.71
NcanP55066 Olfr50-202ENSMUST00000216753 4531 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
NcanP55066 Gm18300-201ENSMUST00000192792 1406 ntBASIC4.38□□□□□ -1.71
NcanP55066 Gm18180-201ENSMUST00000187562 1484 ntBASIC4.37□□□□□ -1.71
NcanP55066 Gm30302-202ENSMUST00000220773 3511 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
NcanP55066 Abcg2-201ENSMUST00000031822 5717 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
NcanP55066 Cnot6l-210ENSMUST00000155901 8564 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
NcanP55066 Fign-203ENSMUST00000131615 9734 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
NcanP55066 Kctd12b-202ENSMUST00000112572 4851 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
NcanP55066 Vmn1r195-202ENSMUST00000228711 3056 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
NcanP55066 Vmn2r-ps5-201ENSMUST00000175971 2730 ntBASIC4.37□□□□□ -1.71
NcanP55066 Trav16d-dv11-201ENSMUST00000103606 353 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
NcanP55066 Gm10964-201ENSMUST00000106852 120 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
NcanP55066 Gm25317-201ENSMUST00000116824 129 ntBASIC4.37□□□□□ -1.71
NcanP55066 Gm23226-201ENSMUST00000116927 103 ntBASIC4.37□□□□□ -1.71
NcanP55066 Gm11982-201ENSMUST00000121480 314 ntBASIC4.37□□□□□ -1.71
NcanP55066 Gm13852-201ENSMUST00000122350 242 ntBASIC4.37□□□□□ -1.71
NcanP55066 Gm26027-201ENSMUST00000122725 268 ntBASIC4.37□□□□□ -1.71
NcanP55066 Gm13335-201ENSMUST00000129994 471 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
NcanP55066 Gm15946-201ENSMUST00000160654 423 ntBASIC4.37□□□□□ -1.71
NcanP55066 Adgrg4-206ENSMUST00000168724 531 ntBASIC4.37□□□□□ -1.71
NcanP55066 Malat1-203ENSMUST00000173499 485 ntTSL 3 BASIC4.37□□□□□ -1.71
NcanP55066 Gm27155-201ENSMUST00000183716 898 ntBASIC4.37□□□□□ -1.71
NcanP55066 Obox4-ps1-201ENSMUST00000184446 700 ntBASIC4.37□□□□□ -1.71
NcanP55066 Mir6916-201ENSMUST00000184514 63 ntBASIC4.37□□□□□ -1.71
NcanP55066 1700063O14Rik-201ENSMUST00000187067 492 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
NcanP55066 Gm29387-201ENSMUST00000189074 623 ntTSL 3 BASIC4.37□□□□□ -1.71
NcanP55066 Gm38283-201ENSMUST00000193041 695 ntBASIC4.37□□□□□ -1.71
NcanP55066 Gm44392-201ENSMUST00000196758 115 ntBASIC4.37□□□□□ -1.71
NcanP55066 Mir142-201ENSMUST00000198092 64 ntBASIC4.37□□□□□ -1.71
NcanP55066 Gm43345-201ENSMUST00000199484 269 ntBASIC4.37□□□□□ -1.71
NcanP55066 Gm43424-201ENSMUST00000200484 253 ntBASIC4.37□□□□□ -1.71
NcanP55066 Gm43971-201ENSMUST00000205010 743 ntTSL 3 BASIC4.37□□□□□ -1.71
NcanP55066 Olfr189-ps1-201ENSMUST00000205310 804 ntBASIC4.37□□□□□ -1.71
NcanP55066 Gm18855-201ENSMUST00000206689 570 ntBASIC4.37□□□□□ -1.71
NcanP55066 Spcs2-202ENSMUST00000207063 727 ntTSL 2 BASIC4.37□□□□□ -1.71
NcanP55066 Gm7639-201ENSMUST00000212608 484 ntBASIC4.37□□□□□ -1.71
NcanP55066 AC132237.2-201ENSMUST00000221702 1209 ntBASIC4.37□□□□□ -1.71
NcanP55066 AL606513.1-201ENSMUST00000225369 579 ntBASIC4.37□□□□□ -1.71
NcanP55066 AC107757.3-201ENSMUST00000226312 535 ntBASIC4.37□□□□□ -1.71
NcanP55066 Il1f8-201ENSMUST00000028363 1217 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
NcanP55066 Olfr504-201ENSMUST00000075595 958 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
NcanP55066 Scgb1b2-201ENSMUST00000080635 424 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
NcanP55066 Mir34b-201ENSMUST00000083558 84 ntBASIC4.37□□□□□ -1.71
NcanP55066 1700017N19Rik-204ENSMUST00000188736 1709 ntTSL 5 BASIC4.37□□□□□ -1.71
NcanP55066 Vmn2r86-201ENSMUST00000170257 3039 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
NcanP55066 Rif1-201ENSMUST00000112693 8509 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
NcanP55066 Gm42842-201ENSMUST00000197736 3004 ntBASIC4.36□□□□□ -1.71
NcanP55066 Acsm3-203ENSMUST00000106527 2557 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
NcanP55066 Gcc2-208ENSMUST00000162860 6400 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
NcanP55066 2810474O19Rik-208ENSMUST00000189837 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
NcanP55066 4921539E11Rik-202ENSMUST00000097944 1683 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
NcanP55066 F9-201ENSMUST00000033477 2734 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
NcanP55066 AC160931.3-201ENSMUST00000222111 2267 ntBASIC4.36□□□□□ -1.71
NcanP55066 Olfr1043-203ENSMUST00000213949 1778 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
NcanP55066 Gm18954-201ENSMUST00000222200 1792 ntBASIC4.36□□□□□ -1.71
NcanP55066 Gm23609-201ENSMUST00000104542 127 ntBASIC4.36□□□□□ -1.71
NcanP55066 Gm14825-201ENSMUST00000113538 701 ntBASIC4.36□□□□□ -1.71
NcanP55066 Mir1195-201ENSMUST00000116818 98 ntBASIC4.36□□□□□ -1.71
NcanP55066 Psmb7-ps2-201ENSMUST00000118546 820 ntBASIC4.36□□□□□ -1.71
NcanP55066 Gm14368-201ENSMUST00000145305 415 ntBASIC4.36□□□□□ -1.71
NcanP55066 Gm7241-201ENSMUST00000159853 357 ntBASIC4.36□□□□□ -1.71
NcanP55066 Esp1-201ENSMUST00000161110 1049 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
NcanP55066 Olfr325-201ENSMUST00000169428 1065 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
NcanP55066 Mir1264-201ENSMUST00000175381 86 ntBASIC4.36□□□□□ -1.71
NcanP55066 Vmn2r-ps122-201ENSMUST00000176687 906 ntBASIC4.36□□□□□ -1.71
NcanP55066 Gm20826-201ENSMUST00000179256 758 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
Retrieved 100 of 76,532 protein–RNA pairs in 93.7 ms