Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Fam46d-204ENSMUST00000167154 3004 ntAPPRIS P1 TSL 3 BASIC3.8□□□□□ -1.8
Sox3P53784 5830444F18Rik-201ENSMUST00000194009 1992 ntBASIC3.8□□□□□ -1.8
Sox3P53784 Gm38104-201ENSMUST00000195121 1895 ntBASIC3.79□□□□□ -1.8
Sox3P53784 Nlrp4f-201ENSMUST00000037372 3527 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Sox3P53784 Slfn9-202ENSMUST00000092840 3862 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Sox3P53784 Sorbs2-203ENSMUST00000124544 3798 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
Sox3P53784 Vmn2r-ps40-201ENSMUST00000174438 2558 ntBASIC3.79□□□□□ -1.8
Sox3P53784 Gm5798-201ENSMUST00000164613 1751 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Sox3P53784 Zfp951-201ENSMUST00000089906 1356 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
Sox3P53784 Arrdc3-201ENSMUST00000099356 4101 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Sox3P53784 Olfr995-202ENSMUST00000216933 1706 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Sox3P53784 Olfr1205-202ENSMUST00000215929 6149 ntAPPRIS P1 TSL 3 BASIC3.79□□□□□ -1.8
Sox3P53784 Gm11877-201ENSMUST00000118921 852 ntBASIC3.79□□□□□ -1.8
Sox3P53784 Gm15313-201ENSMUST00000119179 282 ntBASIC3.79□□□□□ -1.8
Sox3P53784 Gm15403-201ENSMUST00000119343 1227 ntBASIC3.79□□□□□ -1.8
Sox3P53784 Gm14986-201ENSMUST00000121262 1002 ntBASIC3.79□□□□□ -1.8
Sox3P53784 Gm12103-201ENSMUST00000121892 362 ntBASIC3.79□□□□□ -1.8
Sox3P53784 Gm25047-201ENSMUST00000122667 104 ntBASIC3.79□□□□□ -1.8
Sox3P53784 Gm14228-201ENSMUST00000131908 798 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
Sox3P53784 Gm4128-201ENSMUST00000154338 461 ntTSL 3 BASIC3.79□□□□□ -1.8
Sox3P53784 Gm23667-201ENSMUST00000157466 120 ntBASIC3.79□□□□□ -1.8
Sox3P53784 Gm23755-201ENSMUST00000157578 343 ntBASIC3.79□□□□□ -1.8
Sox3P53784 Gm23499-201ENSMUST00000157736 268 ntBASIC3.79□□□□□ -1.8
Sox3P53784 Gm25525-201ENSMUST00000177701 107 ntBASIC3.79□□□□□ -1.8
Sox3P53784 Gm26178-201ENSMUST00000177706 107 ntBASIC3.79□□□□□ -1.8
Sox3P53784 Gm22111-201ENSMUST00000178010 79 ntBASIC3.79□□□□□ -1.8
Sox3P53784 H2al1k-201ENSMUST00000178196 510 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Sox3P53784 Gm26465-201ENSMUST00000178517 107 ntBASIC3.79□□□□□ -1.8
Sox3P53784 Gm24317-201ENSMUST00000178536 107 ntBASIC3.79□□□□□ -1.8
Sox3P53784 Gm23687-201ENSMUST00000178664 79 ntBASIC3.79□□□□□ -1.8
Sox3P53784 Gm25021-201ENSMUST00000179184 107 ntBASIC3.79□□□□□ -1.8
Sox3P53784 Gm24566-201ENSMUST00000179286 79 ntBASIC3.79□□□□□ -1.8
Sox3P53784 Gm23305-201ENSMUST00000179342 79 ntBASIC3.79□□□□□ -1.8
Sox3P53784 Gm22995-201ENSMUST00000179670 107 ntBASIC3.79□□□□□ -1.8
Sox3P53784 Gm24424-201ENSMUST00000179714 107 ntBASIC3.79□□□□□ -1.8
Sox3P53784 Gm26389-201ENSMUST00000179819 79 ntBASIC3.79□□□□□ -1.8
Sox3P53784 Gm24389-201ENSMUST00000179962 107 ntBASIC3.79□□□□□ -1.8
Sox3P53784 Gm22130-201ENSMUST00000179979 79 ntBASIC3.79□□□□□ -1.8
Sox3P53784 Gm25672-201ENSMUST00000180111 107 ntBASIC3.79□□□□□ -1.8
Sox3P53784 Gm22393-201ENSMUST00000180153 79 ntBASIC3.79□□□□□ -1.8
Sox3P53784 Gm25085-201ENSMUST00000180298 79 ntBASIC3.79□□□□□ -1.8
Sox3P53784 Mir6418-201ENSMUST00000185075 115 ntBASIC3.79□□□□□ -1.8
Sox3P53784 Gm29163-201ENSMUST00000188029 107 ntBASIC3.79□□□□□ -1.8
Sox3P53784 Gm29387-201ENSMUST00000189074 623 ntTSL 3 BASIC3.79□□□□□ -1.8
Sox3P53784 Gm37803-201ENSMUST00000191620 711 ntTSL 5 BASIC3.79□□□□□ -1.8
Sox3P53784 Gm42454-201ENSMUST00000196805 1181 ntBASIC3.79□□□□□ -1.8
Sox3P53784 Rpl18a-ps2-201ENSMUST00000197158 174 ntBASIC3.79□□□□□ -1.8
Sox3P53784 5430434I15Rik-201ENSMUST00000197658 1257 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
Sox3P53784 Rpl36a-ps2-201ENSMUST00000197973 321 ntBASIC3.79□□□□□ -1.8
Sox3P53784 AC122464.1-201ENSMUST00000202789 770 ntBASIC3.79□□□□□ -1.8
Sox3P53784 Gm8774-201ENSMUST00000203621 692 ntBASIC3.79□□□□□ -1.8
Sox3P53784 AC161054.1-201ENSMUST00000214319 184 ntBASIC3.79□□□□□ -1.8
Sox3P53784 4930520K02Rik-202ENSMUST00000219658 396 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
Sox3P53784 AC153975.1-201ENSMUST00000220087 926 ntBASIC3.79□□□□□ -1.8
Sox3P53784 AC165164.2-201ENSMUST00000220313 392 ntTSL 3 BASIC3.79□□□□□ -1.8
Sox3P53784 Diaph3-206ENSMUST00000226745 713 ntBASIC3.79□□□□□ -1.8
Sox3P53784 AC115291.2-201ENSMUST00000228335 437 ntBASIC3.79□□□□□ -1.8
Sox3P53784 Mup21-201ENSMUST00000077719 677 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Sox3P53784 Gm23815-201ENSMUST00000083231 107 ntBASIC3.79□□□□□ -1.8
Sox3P53784 Gm23520-201ENSMUST00000093736 107 ntBASIC3.79□□□□□ -1.8
Sox3P53784 Gm10780-201ENSMUST00000099459 285 ntBASIC3.79□□□□□ -1.8
Sox3P53784 D130004A15Rik-201ENSMUST00000201492 1577 ntBASIC3.79□□□□□ -1.8
Sox3P53784 Olfr1298-202ENSMUST00000208284 1563 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Sox3P53784 Olfr183-204ENSMUST00000214831 1906 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Sox3P53784 Olfr799-205ENSMUST00000217364 1580 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Sox3P53784 Olfr1242-202ENSMUST00000111540 2189 ntAPPRIS P1 TSL 3 BASIC3.79□□□□□ -1.8
Sox3P53784 St8sia4-204ENSMUST00000189556 10027 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
Sox3P53784 9430025C20Rik-201ENSMUST00000068663 2115 ntBASIC3.79□□□□□ -1.8
Sox3P53784 Olfr736-202ENSMUST00000213402 2402 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Sox3P53784 Olfr1112-202ENSMUST00000216772 1443 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
Sox3P53784 Ntrk3-201ENSMUST00000039431 19703 ntAPPRIS P2 TSL 1 (best) BASIC3.78□□□□□ -1.8
Sox3P53784 Olfr598-202ENSMUST00000214765 2026 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
Sox3P53784 2210418O10Rik-203ENSMUST00000136719 2314 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
Sox3P53784 Vmn1r51-205ENSMUST00000227109 4214 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
Sox3P53784 Zfp62-201ENSMUST00000061757 3852 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
Sox3P53784 Gm4567-202ENSMUST00000190554 1581 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
Sox3P53784 Gm10668-202ENSMUST00000191073 1581 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
Sox3P53784 Gm37303-201ENSMUST00000194202 1559 ntBASIC3.78□□□□□ -1.8
Sox3P53784 Trbv19-201ENSMUST00000103276 566 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
Sox3P53784 Ighv1-4-201ENSMUST00000103493 351 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
Sox3P53784 Gm26140-201ENSMUST00000103807 110 ntBASIC3.78□□□□□ -1.8
Sox3P53784 Anp32-ps-201ENSMUST00000118265 388 ntBASIC3.78□□□□□ -1.8
Sox3P53784 Gm13170-201ENSMUST00000119716 643 ntBASIC3.78□□□□□ -1.8
Sox3P53784 Olfr1050-ps1-201ENSMUST00000119802 947 ntBASIC3.78□□□□□ -1.8
Sox3P53784 Gm13865-201ENSMUST00000120957 865 ntBASIC3.78□□□□□ -1.8
Sox3P53784 Gm12313-201ENSMUST00000121347 421 ntBASIC3.78□□□□□ -1.8
Sox3P53784 Gm11692-201ENSMUST00000122121 902 ntBASIC3.78□□□□□ -1.8
Sox3P53784 Gm14473-201ENSMUST00000122269 557 ntBASIC3.78□□□□□ -1.8
Sox3P53784 Gm15461-201ENSMUST00000143488 235 ntTSL 3 BASIC3.78□□□□□ -1.8
Sox3P53784 Gm16064-201ENSMUST00000154997 464 ntTSL 2 BASIC3.78□□□□□ -1.8
Sox3P53784 Gm23084-201ENSMUST00000157850 114 ntBASIC3.78□□□□□ -1.8
Sox3P53784 Cylc2-203ENSMUST00000166749 1297 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
Sox3P53784 Vmn1r143-201ENSMUST00000171622 924 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
Sox3P53784 Gm20619-202ENSMUST00000176283 1085 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
Sox3P53784 Gm20834-201ENSMUST00000179558 684 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
Sox3P53784 Gm19637-201ENSMUST00000185933 579 ntBASIC3.78□□□□□ -1.8
Sox3P53784 Gm29405-201ENSMUST00000187204 370 ntTSL 5 BASIC3.78□□□□□ -1.8
Sox3P53784 Gm29563-201ENSMUST00000187249 496 ntBASIC3.78□□□□□ -1.8
Sox3P53784 Gm29557-201ENSMUST00000188245 370 ntTSL 5 BASIC3.78□□□□□ -1.8
Sox3P53784 Gm28174-201ENSMUST00000191003 370 ntTSL 5 BASIC3.78□□□□□ -1.8
Retrieved 100 of 76,532 protein–RNA pairs in 89.4 ms