Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Gm7618-201ENSMUST00000121643 171 ntBASIC3.63□□□□□ -1.83
Sox6P40645 Gm11958-201ENSMUST00000127224 253 ntTSL 5 BASIC3.63□□□□□ -1.83
Sox6P40645 Gm12910-201ENSMUST00000135902 724 ntTSL 5 BASIC3.63□□□□□ -1.83
Sox6P40645 4930503B20Rik-203ENSMUST00000149825 970 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
Sox6P40645 Gm9613-201ENSMUST00000171662 196 ntBASIC3.63□□□□□ -1.83
Sox6P40645 Il1rl1-205ENSMUST00000174335 1216 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
Sox6P40645 Gm20834-201ENSMUST00000179558 684 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
Sox6P40645 Spin2e-201ENSMUST00000179716 705 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
Sox6P40645 1700067G17Rik-201ENSMUST00000186180 603 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
Sox6P40645 Gm29053-201ENSMUST00000187484 370 ntTSL 5 BASIC3.63□□□□□ -1.83
Sox6P40645 Gm30280-201ENSMUST00000192214 262 ntBASIC3.63□□□□□ -1.83
Sox6P40645 Gm37340-201ENSMUST00000193124 759 ntTSL 5 BASIC3.63□□□□□ -1.83
Sox6P40645 Gm9722-201ENSMUST00000194568 802 ntBASIC3.63□□□□□ -1.83
Sox6P40645 Gm38944-201ENSMUST00000208218 512 ntTSL 2 BASIC3.63□□□□□ -1.83
Sox6P40645 Lyrm1-209ENSMUST00000208424 888 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
Sox6P40645 Gm43154-210ENSMUST00000210190 1051 ntTSL 5 BASIC3.63□□□□□ -1.83
Sox6P40645 Olfr593-202ENSMUST00000210686 951 ntAPPRIS ALT2 BASIC3.63□□□□□ -1.83
Sox6P40645 Gm45523-201ENSMUST00000210712 799 ntBASIC3.63□□□□□ -1.83
Sox6P40645 AC121286.1-201ENSMUST00000218811 380 ntTSL 3 BASIC3.63□□□□□ -1.83
Sox6P40645 Gm46998-201ENSMUST00000221444 330 ntBASIC3.63□□□□□ -1.83
Sox6P40645 Prl3d3-202ENSMUST00000223958 675 ntAPPRIS ALT2 BASIC3.63□□□□□ -1.83
Sox6P40645 AC137961.1-201ENSMUST00000227924 734 ntBASIC3.63□□□□□ -1.83
Sox6P40645 Olfr885-201ENSMUST00000081985 930 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
Sox6P40645 Gm904-201ENSMUST00000099519 649 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
Sox6P40645 Mga-202ENSMUST00000079934 13304 ntAPPRIS ALT2 TSL 5 BASIC3.63□□□□□ -1.83
Sox6P40645 Olfr1101-202ENSMUST00000214411 3235 ntAPPRIS P1 TSL 3 BASIC3.63□□□□□ -1.83
Sox6P40645 Hyal6-201ENSMUST00000031690 3452 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
Sox6P40645 Gm42481-201ENSMUST00000196822 2178 ntBASIC3.63□□□□□ -1.83
Sox6P40645 4932431L22Rik-201ENSMUST00000193456 3140 ntBASIC3.63□□□□□ -1.83
Sox6P40645 Gm13230-201ENSMUST00000120870 1575 ntBASIC3.63□□□□□ -1.83
Sox6P40645 St8sia4-204ENSMUST00000189556 10027 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
Sox6P40645 Zfp981-201ENSMUST00000105735 3038 ntAPPRIS P1 TSL 2 BASIC3.62□□□□□ -1.83
Sox6P40645 Gm4724-201ENSMUST00000109045 1659 ntAPPRIS P1 TSL 2 BASIC3.62□□□□□ -1.83
Sox6P40645 Tex47-203ENSMUST00000160634 2881 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
Sox6P40645 Vmn1r89-203ENSMUST00000227176 4189 ntAPPRIS P2 BASIC3.62□□□□□ -1.83
Sox6P40645 Hmgb1-203ENSMUST00000110505 1720 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
Sox6P40645 Oog1-202ENSMUST00000222112 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
Sox6P40645 Gm43736-201ENSMUST00000196377 2281 ntBASIC3.62□□□□□ -1.83
Sox6P40645 Gm10745-201ENSMUST00000192022 1523 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
Sox6P40645 Ankrd28-207ENSMUST00000227863 6616 ntAPPRIS ALT1 BASIC3.62□□□□□ -1.83
Sox6P40645 Gm24125-201ENSMUST00000104105 137 ntBASIC3.62□□□□□ -1.83
Sox6P40645 2210407C18Rik-202ENSMUST00000108821 998 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
Sox6P40645 Prl8a2-202ENSMUST00000110363 922 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
Sox6P40645 Gm25104-201ENSMUST00000122476 163 ntBASIC3.62□□□□□ -1.83
Sox6P40645 Gm22345-201ENSMUST00000122644 107 ntBASIC3.62□□□□□ -1.83
Sox6P40645 Gm11216-201ENSMUST00000125240 354 ntTSL 5 BASIC3.62□□□□□ -1.83
Sox6P40645 Gm15200-201ENSMUST00000149950 410 ntTSL 2 BASIC3.62□□□□□ -1.83
Sox6P40645 Gm13923-201ENSMUST00000153283 288 ntTSL 3 BASIC3.62□□□□□ -1.83
Sox6P40645 4930548K13Rik-201ENSMUST00000154459 561 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
Sox6P40645 Gm22036-201ENSMUST00000157279 215 ntBASIC3.62□□□□□ -1.83
Sox6P40645 Gm15508-201ENSMUST00000160330 325 ntBASIC3.62□□□□□ -1.83
Sox6P40645 Mir3473f-201ENSMUST00000183743 136 ntBASIC3.62□□□□□ -1.83
Sox6P40645 AV026068-206ENSMUST00000187461 513 ntTSL 2 BASIC3.62□□□□□ -1.83
Sox6P40645 Mrgprb1-202ENSMUST00000188095 472 ntTSL 3 BASIC3.62□□□□□ -1.83
Sox6P40645 Olfr1225-201ENSMUST00000188861 1027 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
Sox6P40645 Gm37501-201ENSMUST00000192830 691 ntBASIC3.62□□□□□ -1.83
Sox6P40645 Gm44354-201ENSMUST00000196017 143 ntBASIC3.62□□□□□ -1.83
Sox6P40645 Gm42451-201ENSMUST00000197410 244 ntBASIC3.62□□□□□ -1.83
Sox6P40645 Gm43424-201ENSMUST00000200484 253 ntBASIC3.62□□□□□ -1.83
Sox6P40645 Gm8820-201ENSMUST00000204077 571 ntBASIC3.62□□□□□ -1.83
Sox6P40645 A730082K24Rik-201ENSMUST00000205365 465 ntTSL 3 BASIC3.62□□□□□ -1.83
Sox6P40645 Gm5339-201ENSMUST00000210551 1102 ntBASIC3.62□□□□□ -1.83
Sox6P40645 AC153912.1-201ENSMUST00000217011 724 ntAPPRIS P1 TSL 3 BASIC3.62□□□□□ -1.83
Sox6P40645 Gm33091-201ENSMUST00000217798 748 ntTSL 3 BASIC3.62□□□□□ -1.83
Sox6P40645 Gm29884-201ENSMUST00000218403 453 ntBASIC3.62□□□□□ -1.83
Sox6P40645 Gm7530-201ENSMUST00000218466 605 ntBASIC3.62□□□□□ -1.83
Sox6P40645 Gm30893-201ENSMUST00000220479 903 ntTSL 5 BASIC3.62□□□□□ -1.83
Sox6P40645 Olfr357-201ENSMUST00000069578 1092 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
Sox6P40645 Gm25007-201ENSMUST00000083808 133 ntBASIC3.62□□□□□ -1.83
Sox6P40645 Krtap31-1-201ENSMUST00000093935 973 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
Sox6P40645 Gm5169-201ENSMUST00000096469 768 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
Sox6P40645 Olfr775-201ENSMUST00000097163 939 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
Sox6P40645 Olfr1154-201ENSMUST00000099844 933 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
Sox6P40645 Gm35835-202ENSMUST00000216984 3350 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
Sox6P40645 Zscan4f-202ENSMUST00000145237 1829 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
Sox6P40645 Fam111a-204ENSMUST00000151307 3687 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
Sox6P40645 Nat1-201ENSMUST00000026677 1347 ntAPPRIS P2 BASIC3.62□□□□□ -1.83
Sox6P40645 Vmn2r59-201ENSMUST00000168489 2598 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Sox6P40645 Olfr1058-202ENSMUST00000213998 1710 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Sox6P40645 Senp8-203ENSMUST00000177963 3792 ntAPPRIS P3 TSL 1 (best) BASIC3.61□□□□□ -1.83
Sox6P40645 Gm13974-201ENSMUST00000144368 1454 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
Sox6P40645 Vmn1r36-203ENSMUST00000226728 1458 ntBASIC3.61□□□□□ -1.83
Sox6P40645 Gm7233-201ENSMUST00000168619 1761 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Sox6P40645 Nlrp4b-201ENSMUST00000047809 3274 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
Sox6P40645 Zfp992-201ENSMUST00000105733 4550 ntAPPRIS P1 TSL 3 BASIC3.61□□□□□ -1.83
Sox6P40645 Ktn1-226ENSMUST00000191511 3962 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
Sox6P40645 Mir551b-201ENSMUST00000102165 98 ntBASIC3.61□□□□□ -1.83
Sox6P40645 Igkv1-135-201ENSMUST00000103303 394 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
Sox6P40645 Gm14037-201ENSMUST00000120576 313 ntBASIC3.61□□□□□ -1.83
Sox6P40645 Gm24850-201ENSMUST00000158029 119 ntBASIC3.61□□□□□ -1.83
Sox6P40645 Gm8653-201ENSMUST00000163096 924 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
Sox6P40645 Vmn1r117-201ENSMUST00000166937 924 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
Sox6P40645 Gm6164-201ENSMUST00000169774 924 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
Sox6P40645 Gm8807-201ENSMUST00000179328 492 ntBASIC3.61□□□□□ -1.83
Sox6P40645 Gm15099-201ENSMUST00000179833 573 ntTSL 5 BASIC3.61□□□□□ -1.83
Sox6P40645 Mir7028-201ENSMUST00000185016 64 ntBASIC3.61□□□□□ -1.83
Sox6P40645 Zfp-ps-201ENSMUST00000185025 478 ntBASIC3.61□□□□□ -1.83
Sox6P40645 Gm28935-201ENSMUST00000185737 568 ntTSL 2 BASIC3.61□□□□□ -1.83
Sox6P40645 Gm6712-202ENSMUST00000186431 526 ntTSL 5 BASIC3.61□□□□□ -1.83
Sox6P40645 Gm28191-201ENSMUST00000189112 211 ntBASIC3.61□□□□□ -1.83
Retrieved 100 of 76,532 protein–RNA pairs in 71.4 ms