Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Gm23747-201ENSMUST00000104228 131 ntBASIC4□□□□□ -1.77
Col2a1P28481 Gm14825-201ENSMUST00000113538 701 ntBASIC4□□□□□ -1.77
Col2a1P28481 Gm11408-201ENSMUST00000117889 519 ntBASIC4□□□□□ -1.77
Col2a1P28481 Gm14534-201ENSMUST00000120045 357 ntBASIC4□□□□□ -1.77
Col2a1P28481 Gm12514-202ENSMUST00000150455 699 ntTSL 5 BASIC4□□□□□ -1.77
Col2a1P28481 Pate1-201ENSMUST00000170021 389 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
Col2a1P28481 Vmn2r-ps58-201ENSMUST00000173044 242 ntBASIC4□□□□□ -1.77
Col2a1P28481 Gm22910-201ENSMUST00000178568 132 ntBASIC4□□□□□ -1.77
Col2a1P28481 Gm42919-201ENSMUST00000197753 1284 ntBASIC4□□□□□ -1.77
Col2a1P28481 Gm44084-201ENSMUST00000203947 409 ntBASIC4□□□□□ -1.77
Col2a1P28481 Gm35625-202ENSMUST00000211040 266 ntTSL 3 BASIC4□□□□□ -1.77
Col2a1P28481 AC108416.2-201ENSMUST00000226792 367 ntBASIC4□□□□□ -1.77
Col2a1P28481 Gm24533-201ENSMUST00000083138 196 ntBASIC4□□□□□ -1.77
Col2a1P28481 Olfr298-202ENSMUST00000213223 3273 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
Col2a1P28481 Olfr1042-202ENSMUST00000215624 5096 ntAPPRIS P1 BASIC4□□□□□ -1.77
Col2a1P28481 Pkhd1l1-203ENSMUST00000209244 12949 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
Col2a1P28481 4930533N22Rik-201ENSMUST00000206433 3509 ntTSL 1 (best) BASIC4□□□□□ -1.77
Col2a1P28481 Gm18594-201ENSMUST00000175733 1403 ntBASIC4□□□□□ -1.77
Col2a1P28481 Nap1l1-204ENSMUST00000218828 3934 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
Col2a1P28481 Sycp2-201ENSMUST00000081134 5717 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
Col2a1P28481 Gm42481-201ENSMUST00000196822 2178 ntBASIC4□□□□□ -1.77
Col2a1P28481 Gm44286-201ENSMUST00000204098 1487 ntBASIC4□□□□□ -1.77
Col2a1P28481 Csn3-203ENSMUST00000113271 1596 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
Col2a1P28481 AC154386.1-201ENSMUST00000222753 2871 ntBASIC3.99□□□□□ -1.77
Col2a1P28481 Gm11939-201ENSMUST00000104931 300 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
Col2a1P28481 Gm17193-201ENSMUST00000116345 691 ntTSL 5 BASIC3.99□□□□□ -1.77
Col2a1P28481 Gm26020-201ENSMUST00000122729 183 ntBASIC3.99□□□□□ -1.77
Col2a1P28481 Gm16563-201ENSMUST00000162673 423 ntBASIC3.99□□□□□ -1.77
Col2a1P28481 Vmn2r-ps132-201ENSMUST00000176738 651 ntBASIC3.99□□□□□ -1.77
Col2a1P28481 Gm8906-202ENSMUST00000179375 465 ntAPPRIS ALT2 TSL 5 BASIC3.99□□□□□ -1.77
Col2a1P28481 Obox1-206ENSMUST00000181001 1217 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
Col2a1P28481 1700054K19Rik-201ENSMUST00000186102 452 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
Col2a1P28481 Gm40155-201ENSMUST00000198291 818 ntTSL 3 BASIC3.99□□□□□ -1.77
Col2a1P28481 Gm7624-201ENSMUST00000209702 435 ntBASIC3.99□□□□□ -1.77
Col2a1P28481 Gm45409-201ENSMUST00000211486 252 ntBASIC3.99□□□□□ -1.77
Col2a1P28481 AC166323.1-201ENSMUST00000217756 367 ntBASIC3.99□□□□□ -1.77
Col2a1P28481 Defb9-201ENSMUST00000057076 310 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
Col2a1P28481 Olfr506-201ENSMUST00000077343 1008 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
Col2a1P28481 Defb18-201ENSMUST00000097818 258 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
Col2a1P28481 Olfr606-201ENSMUST00000098200 960 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
Col2a1P28481 Olfr1233-201ENSMUST00000099784 1042 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
Col2a1P28481 AC122840.2-201ENSMUST00000221030 2659 ntBASIC3.99□□□□□ -1.77
Col2a1P28481 Vmn1r82-201ENSMUST00000072801 4784 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
Col2a1P28481 Olfr1277-202ENSMUST00000214760 5944 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
Col2a1P28481 Vmn1r30-204ENSMUST00000228577 1968 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
Col2a1P28481 Gm44049-201ENSMUST00000204905 2984 ntBASIC3.99□□□□□ -1.77
Col2a1P28481 Zfp980-201ENSMUST00000105738 4006 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
Col2a1P28481 Olfr586-202ENSMUST00000211075 4562 ntAPPRIS ALT2 TSL 5 BASIC3.99□□□□□ -1.77
Col2a1P28481 1700017N19Rik-201ENSMUST00000041162 1691 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
Col2a1P28481 Gm38699-201ENSMUST00000221301 1740 ntBASIC3.99□□□□□ -1.77
Col2a1P28481 Olfr652-202ENSMUST00000215410 4672 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
Col2a1P28481 Tfpi-204ENSMUST00000111714 3614 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
Col2a1P28481 Gm23609-201ENSMUST00000104542 127 ntBASIC3.98□□□□□ -1.77
Col2a1P28481 Gm25967-201ENSMUST00000157168 147 ntBASIC3.98□□□□□ -1.77
Col2a1P28481 Gm16101-201ENSMUST00000160695 430 ntBASIC3.98□□□□□ -1.77
Col2a1P28481 Gm16567-201ENSMUST00000160967 576 ntTSL 5 BASIC3.98□□□□□ -1.77
Col2a1P28481 Mir6715-201ENSMUST00000184990 57 ntBASIC3.98□□□□□ -1.77
Col2a1P28481 Trbv27-201ENSMUST00000193711 277 ntBASIC3.98□□□□□ -1.77
Col2a1P28481 Gm44176-201ENSMUST00000204336 276 ntTSL 5 BASIC3.98□□□□□ -1.77
Col2a1P28481 4930595O18Rik-201ENSMUST00000205099 607 ntBASIC3.98□□□□□ -1.77
Col2a1P28481 Vmn1r179-201ENSMUST00000049819 972 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
Col2a1P28481 Olfr1176-201ENSMUST00000057439 949 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
Col2a1P28481 Zfp600-204ENSMUST00000168483 4244 ntAPPRIS P1 TSL 2 BASIC3.98□□□□□ -1.77
Col2a1P28481 Cngb3-201ENSMUST00000102999 4708 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
Col2a1P28481 A730009L09Rik-201ENSMUST00000209558 2512 ntAPPRIS P5 TSL 1 (best) BASIC3.98□□□□□ -1.77
Col2a1P28481 Gm42888-201ENSMUST00000202425 4361 ntBASIC3.98□□□□□ -1.77
Col2a1P28481 Smim9-201ENSMUST00000101433 706 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
Col2a1P28481 Trav14d-2-201ENSMUST00000103597 276 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
Col2a1P28481 Trav14n-2-201ENSMUST00000103623 276 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
Col2a1P28481 Gm24541-201ENSMUST00000103871 96 ntBASIC3.98□□□□□ -1.77
Col2a1P28481 Gm11110-201ENSMUST00000112915 1013 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
Col2a1P28481 Gm13155-201ENSMUST00000119277 646 ntBASIC3.98□□□□□ -1.77
Col2a1P28481 Gm8178-201ENSMUST00000121570 646 ntBASIC3.98□□□□□ -1.77
Col2a1P28481 Gm16064-201ENSMUST00000154997 464 ntTSL 2 BASIC3.98□□□□□ -1.77
Col2a1P28481 Gm24289-201ENSMUST00000157629 135 ntBASIC3.98□□□□□ -1.77
Col2a1P28481 Gm23592-201ENSMUST00000157859 117 ntBASIC3.98□□□□□ -1.77
Col2a1P28481 Gm7281-201ENSMUST00000160010 543 ntBASIC3.98□□□□□ -1.77
Col2a1P28481 Gm15629-201ENSMUST00000161819 476 ntTSL 5 BASIC3.98□□□□□ -1.77
Col2a1P28481 Gm24819-201ENSMUST00000175094 166 ntBASIC3.98□□□□□ -1.77
Col2a1P28481 Trav14-2-202ENSMUST00000184874 276 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
Col2a1P28481 Gm8282-201ENSMUST00000187559 483 ntBASIC3.98□□□□□ -1.77
Col2a1P28481 Gm28069-201ENSMUST00000189926 214 ntBASIC3.98□□□□□ -1.77
Col2a1P28481 Gm18867-201ENSMUST00000198022 1179 ntBASIC3.98□□□□□ -1.77
Col2a1P28481 Gm7443-201ENSMUST00000206355 378 ntBASIC3.98□□□□□ -1.77
Col2a1P28481 Gm6850-201ENSMUST00000210031 530 ntBASIC3.98□□□□□ -1.77
Col2a1P28481 2500002B13Rik-202ENSMUST00000210752 298 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
Col2a1P28481 Gm34158-201ENSMUST00000216390 567 ntTSL 5 BASIC3.98□□□□□ -1.77
Col2a1P28481 Gm9765-201ENSMUST00000043170 321 ntBASIC3.98□□□□□ -1.77
Col2a1P28481 Olfr1442-201ENSMUST00000057924 1065 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
Col2a1P28481 Olfr469-202ENSMUST00000213252 3164 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
Col2a1P28481 Gm43665-201ENSMUST00000198672 1659 ntBASIC3.97□□□□□ -1.77
Col2a1P28481 Btbd35f5-201ENSMUST00000179538 1950 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
Col2a1P28481 Gm14443-201ENSMUST00000109054 4516 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
Col2a1P28481 Gm19619-201ENSMUST00000200707 3201 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
Col2a1P28481 AC167250.1-201ENSMUST00000213739 3813 ntBASIC3.97□□□□□ -1.77
Col2a1P28481 Nbeal1-203ENSMUST00000160834 15731 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
Col2a1P28481 Dnah6-203ENSMUST00000114040 12513 ntAPPRIS ALT2 TSL 5 BASIC3.97□□□□□ -1.77
Col2a1P28481 Gm23577-201ENSMUST00000103950 110 ntBASIC3.97□□□□□ -1.77
Col2a1P28481 Gm14622-201ENSMUST00000117117 468 ntBASIC3.97□□□□□ -1.77
Col2a1P28481 Zcchc9-ps-201ENSMUST00000117884 786 ntBASIC3.97□□□□□ -1.77
Retrieved 100 of 76,532 protein–RNA pairs in 89 ms