Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Gm43214-201ENSMUST00000199242 352 ntBASIC3.4□□□□□ -1.87
Cdx1P18111 Gm42758-201ENSMUST00000202146 283 ntBASIC3.4□□□□□ -1.87
Cdx1P18111 Gm44371-201ENSMUST00000204148 467 ntBASIC3.4□□□□□ -1.87
Cdx1P18111 Gm44487-201ENSMUST00000205145 325 ntBASIC3.4□□□□□ -1.87
Cdx1P18111 Gm45081-201ENSMUST00000206281 572 ntBASIC3.4□□□□□ -1.87
Cdx1P18111 Gm17987-201ENSMUST00000206902 603 ntBASIC3.4□□□□□ -1.87
Cdx1P18111 Gm45574-201ENSMUST00000210921 331 ntBASIC3.4□□□□□ -1.87
Cdx1P18111 Gm6657-204ENSMUST00000211288 1091 ntAPPRIS P5 TSL 5 BASIC3.4□□□□□ -1.87
Cdx1P18111 CAAA01052029.1-201ENSMUST00000218410 271 ntBASIC3.4□□□□□ -1.87
Cdx1P18111 Gm6988-201ENSMUST00000222676 375 ntBASIC3.4□□□□□ -1.87
Cdx1P18111 AC158392.1-201ENSMUST00000223720 1069 ntBASIC3.4□□□□□ -1.87
Cdx1P18111 AC239878.1-201ENSMUST00000224212 506 ntBASIC3.4□□□□□ -1.87
Cdx1P18111 AC160756.1-201ENSMUST00000227266 235 ntBASIC3.4□□□□□ -1.87
Cdx1P18111 AC151902.1-201ENSMUST00000227800 375 ntBASIC3.4□□□□□ -1.87
Cdx1P18111 AC137961.1-201ENSMUST00000227924 734 ntBASIC3.4□□□□□ -1.87
Cdx1P18111 AC074315.1-201ENSMUST00000228801 214 ntBASIC3.4□□□□□ -1.87
Cdx1P18111 Il1f8-201ENSMUST00000028363 1217 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
Cdx1P18111 Olfr818-201ENSMUST00000074308 957 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
Cdx1P18111 Olfr504-201ENSMUST00000075595 958 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
Cdx1P18111 Gm23300-201ENSMUST00000082712 125 ntBASIC3.4□□□□□ -1.87
Cdx1P18111 Gm8074-201ENSMUST00000095071 252 ntBASIC3.4□□□□□ -1.87
Cdx1P18111 Olfr1241-201ENSMUST00000099778 945 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
Cdx1P18111 Olfr992-201ENSMUST00000099927 930 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
Cdx1P18111 Olfr577-202ENSMUST00000214080 3282 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
Cdx1P18111 Mapk8-203ENSMUST00000111943 1310 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
Cdx1P18111 Olfr781-202ENSMUST00000204108 1304 ntAPPRIS P1 TSL 3 BASIC3.4□□□□□ -1.87
Cdx1P18111 Olfr1369-ps1-203ENSMUST00000213922 3930 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Cdx1P18111 Gm42876-201ENSMUST00000196989 3215 ntBASIC3.39□□□□□ -1.87
Cdx1P18111 Mmp1b-201ENSMUST00000047888 1449 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
Cdx1P18111 Gm15752-201ENSMUST00000117427 394 ntBASIC3.39□□□□□ -1.87
Cdx1P18111 Gm15916-201ENSMUST00000118355 736 ntBASIC3.39□□□□□ -1.87
Cdx1P18111 Gm12340-201ENSMUST00000121617 462 ntBASIC3.39□□□□□ -1.87
Cdx1P18111 Olfr343-ps1-201ENSMUST00000121883 303 ntBASIC3.39□□□□□ -1.87
Cdx1P18111 Gm15584-201ENSMUST00000123231 759 ntTSL 2 BASIC3.39□□□□□ -1.87
Cdx1P18111 Tex50-201ENSMUST00000135643 1192 ntAPPRIS P1 TSL 2 BASIC3.39□□□□□ -1.87
Cdx1P18111 Gm16327-201ENSMUST00000137146 228 ntBASIC3.39□□□□□ -1.87
Cdx1P18111 Gm24507-201ENSMUST00000157683 134 ntBASIC3.39□□□□□ -1.87
Cdx1P18111 Gm24751-201ENSMUST00000157844 102 ntBASIC3.39□□□□□ -1.87
Cdx1P18111 Gm24905-201ENSMUST00000158129 104 ntBASIC3.39□□□□□ -1.87
Cdx1P18111 Gm24739-201ENSMUST00000158855 292 ntBASIC3.39□□□□□ -1.87
Cdx1P18111 Gm17571-201ENSMUST00000167906 90 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Cdx1P18111 Vmn2r-ps64-201ENSMUST00000173690 523 ntBASIC3.39□□□□□ -1.87
Cdx1P18111 Gm27155-201ENSMUST00000183716 898 ntBASIC3.39□□□□□ -1.87
Cdx1P18111 Mir3473f-201ENSMUST00000183743 136 ntBASIC3.39□□□□□ -1.87
Cdx1P18111 Gm27233-201ENSMUST00000184030 307 ntBASIC3.39□□□□□ -1.87
Cdx1P18111 Gm27308-201ENSMUST00000184807 233 ntBASIC3.39□□□□□ -1.87
Cdx1P18111 Gm29327-201ENSMUST00000188229 388 ntTSL 5 BASIC3.39□□□□□ -1.87
Cdx1P18111 Gm29443-202ENSMUST00000190297 410 ntTSL 3 BASIC3.39□□□□□ -1.87
Cdx1P18111 Gm7897-201ENSMUST00000193981 554 ntBASIC3.39□□□□□ -1.87
Cdx1P18111 Gm19620-201ENSMUST00000195972 434 ntBASIC3.39□□□□□ -1.87
Cdx1P18111 Gm19080-201ENSMUST00000196082 550 ntBASIC3.39□□□□□ -1.87
Cdx1P18111 Gm43601-201ENSMUST00000196294 945 ntBASIC3.39□□□□□ -1.87
Cdx1P18111 Gm43765-201ENSMUST00000196303 893 ntBASIC3.39□□□□□ -1.87
Cdx1P18111 Gm43651-201ENSMUST00000199796 439 ntBASIC3.39□□□□□ -1.87
Cdx1P18111 Gm44865-201ENSMUST00000207240 531 ntBASIC3.39□□□□□ -1.87
Cdx1P18111 C030038I04Rik-201ENSMUST00000207840 740 ntBASIC3.39□□□□□ -1.87
Cdx1P18111 Gm2059-201ENSMUST00000212025 287 ntBASIC3.39□□□□□ -1.87
Cdx1P18111 Olfr864-ps1-201ENSMUST00000212664 930 ntBASIC3.39□□□□□ -1.87
Cdx1P18111 1700054O05Rik-201ENSMUST00000214107 555 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
Cdx1P18111 CT025680.1-201ENSMUST00000217375 375 ntBASIC3.39□□□□□ -1.87
Cdx1P18111 AC149586.1-201ENSMUST00000222647 645 ntTSL 3 BASIC3.39□□□□□ -1.87
Cdx1P18111 CT025552.2-201ENSMUST00000225497 317 ntBASIC3.39□□□□□ -1.87
Cdx1P18111 AC157772.2-201ENSMUST00000228202 259 ntBASIC3.39□□□□□ -1.87
Cdx1P18111 Eif1-ps1-201ENSMUST00000086606 330 ntBASIC3.39□□□□□ -1.87
Cdx1P18111 n-R5s152-201ENSMUST00000093641 119 ntBASIC3.39□□□□□ -1.87
Cdx1P18111 Olfr1162-201ENSMUST00000099837 945 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
Cdx1P18111 Mmp16-201ENSMUST00000029881 5011 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
Cdx1P18111 A630033H20Rik-205ENSMUST00000167673 3044 ntAPPRIS P1 TSL 2 BASIC3.39□□□□□ -1.87
Cdx1P18111 Gm18180-201ENSMUST00000187562 1484 ntBASIC3.39□□□□□ -1.87
Cdx1P18111 Olfr787-202ENSMUST00000213329 4958 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Cdx1P18111 Zp3r-201ENSMUST00000039862 2042 ntAPPRIS P2 TSL 1 (best) BASIC3.39□□□□□ -1.87
Cdx1P18111 1810006J02Rik-201ENSMUST00000186473 1687 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
Cdx1P18111 Gm14696-201ENSMUST00000144294 3976 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
Cdx1P18111 Gm7470-201ENSMUST00000194219 2095 ntBASIC3.39□□□□□ -1.87
Cdx1P18111 Gm11823-201ENSMUST00000130582 2278 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
Cdx1P18111 Zfp850-203ENSMUST00000180502 6163 ntAPPRIS P1 TSL 3 BASIC3.38□□□□□ -1.87
Cdx1P18111 Gm17655-202ENSMUST00000210275 1776 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
Cdx1P18111 Gm38407-202ENSMUST00000219221 2391 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
Cdx1P18111 Psmc6-201ENSMUST00000022380 2234 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
Cdx1P18111 Mir761-201ENSMUST00000103245 76 ntBASIC3.38□□□□□ -1.87
Cdx1P18111 Igkv11-106-201ENSMUST00000103331 346 ntBASIC3.38□□□□□ -1.87
Cdx1P18111 Gm25097-201ENSMUST00000104042 145 ntBASIC3.38□□□□□ -1.87
Cdx1P18111 Gm12568-201ENSMUST00000117362 624 ntBASIC3.38□□□□□ -1.87
Cdx1P18111 Xlr5d-ps-201ENSMUST00000117501 782 ntBASIC3.38□□□□□ -1.87
Cdx1P18111 Gm11878-201ENSMUST00000117908 400 ntBASIC3.38□□□□□ -1.87
Cdx1P18111 Gm6121-201ENSMUST00000119231 924 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
Cdx1P18111 Gm15403-201ENSMUST00000119343 1227 ntBASIC3.38□□□□□ -1.87
Cdx1P18111 Gm10230-201ENSMUST00000119362 867 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
Cdx1P18111 Rps18-ps2-201ENSMUST00000119493 398 ntBASIC3.38□□□□□ -1.87
Cdx1P18111 Gm14119-201ENSMUST00000119511 235 ntBASIC3.38□□□□□ -1.87
Cdx1P18111 Gm14881-201ENSMUST00000120366 372 ntBASIC3.38□□□□□ -1.87
Cdx1P18111 Olfr336-ps1-201ENSMUST00000120897 940 ntBASIC3.38□□□□□ -1.87
Cdx1P18111 Gm15116-201ENSMUST00000122248 663 ntBASIC3.38□□□□□ -1.87
Cdx1P18111 Gm10059-201ENSMUST00000131139 171 ntBASIC3.38□□□□□ -1.87
Cdx1P18111 Gm12762-201ENSMUST00000140881 483 ntTSL 2 BASIC3.38□□□□□ -1.87
Cdx1P18111 Gm3077-201ENSMUST00000165903 627 ntBASIC3.38□□□□□ -1.87
Cdx1P18111 Gm14819-202ENSMUST00000169396 639 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
Cdx1P18111 Vmn1r-ps65-201ENSMUST00000174235 951 ntBASIC3.38□□□□□ -1.87
Cdx1P18111 Gm10487-201ENSMUST00000177566 639 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
Cdx1P18111 Gm14632-202ENSMUST00000177917 639 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
Retrieved 100 of 76,532 protein–RNA pairs in 88 ms