Protein–RNA interactions for Protein: P09026

Hoxb3, Homeobox protein Hox-B3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxb3P09026 Nbas-201ENSMUST00000042953 7234 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Hoxb3P09026 B130024G19Rik-203ENSMUST00000190320 5451 ntTSL 5 BASIC6.12□□□□□ -1.43
Hoxb3P09026 AW554918-208ENSMUST00000165400 5351 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
Hoxb3P09026 Olfr1173-202ENSMUST00000216887 5363 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
Hoxb3P09026 AW554918-202ENSMUST00000097643 5351 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
Hoxb3P09026 Il1rl2-204ENSMUST00000194296 3908 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Hoxb3P09026 AC122346.1-201ENSMUST00000225266 3732 ntBASIC6.12□□□□□ -1.43
Hoxb3P09026 Lifr-204ENSMUST00000226471 3392 ntAPPRIS P3 BASIC6.12□□□□□ -1.43
Hoxb3P09026 Olfr741-203ENSMUST00000213903 3305 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Hoxb3P09026 A230108P19Rik-201ENSMUST00000151782 2500 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Hoxb3P09026 Foxp1-204ENSMUST00000113322 7177 ntTSL 5 BASIC6.11□□□□□ -1.43
Hoxb3P09026 C130089K02Rik-201ENSMUST00000194534 6960 ntBASIC6.11□□□□□ -1.43
Hoxb3P09026 Lipk-203ENSMUST00000225505 2083 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Hoxb3P09026 Ift80-202ENSMUST00000107812 4063 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Hoxb3P09026 Ktn1-202ENSMUST00000185343 3846 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
Hoxb3P09026 Ktn1-205ENSMUST00000186627 3840 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
Hoxb3P09026 Mgam-206ENSMUST00000202779 3821 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Hoxb3P09026 Gm37642-201ENSMUST00000193166 1735 ntBASIC6.11□□□□□ -1.43
Hoxb3P09026 BC051142-202ENSMUST00000097348 1732 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
Hoxb3P09026 2810403D21Rik-202ENSMUST00000124329 1660 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Hoxb3P09026 Gm26742-201ENSMUST00000181829 3340 ntTSL 5 BASIC6.11□□□□□ -1.43
Hoxb3P09026 Btla-201ENSMUST00000063654 3235 ntAPPRIS P4 TSL 1 (best) BASIC6.11□□□□□ -1.43
Hoxb3P09026 Tlr1-201ENSMUST00000059349 2783 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Hoxb3P09026 Stk4-202ENSMUST00000088291 4098 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Hoxb3P09026 Itch-202ENSMUST00000109685 5309 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Hoxb3P09026 Vmn2r-ps133-201ENSMUST00000176979 2569 ntBASIC6.11□□□□□ -1.43
Hoxb3P09026 Gm5427-201ENSMUST00000217680 2591 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Hoxb3P09026 Gm11970-201ENSMUST00000116105 320 ntBASIC6.11□□□□□ -1.43
Hoxb3P09026 Gm14753-201ENSMUST00000118503 246 ntBASIC6.11□□□□□ -1.43
Hoxb3P09026 Gm14940-201ENSMUST00000119309 495 ntBASIC6.11□□□□□ -1.43
Hoxb3P09026 Gm13818-201ENSMUST00000119441 511 ntBASIC6.11□□□□□ -1.43
Hoxb3P09026 Gm23759-201ENSMUST00000158351 268 ntBASIC6.11□□□□□ -1.43
Hoxb3P09026 Gm24100-201ENSMUST00000178592 79 ntBASIC6.11□□□□□ -1.43
Hoxb3P09026 Nutf2-ps2-201ENSMUST00000179225 384 ntBASIC6.11□□□□□ -1.43
Hoxb3P09026 Gm24137-201ENSMUST00000180055 79 ntBASIC6.11□□□□□ -1.43
Hoxb3P09026 Gm22391-201ENSMUST00000180356 79 ntBASIC6.11□□□□□ -1.43
Hoxb3P09026 Gm26622-201ENSMUST00000180520 298 ntBASIC6.11□□□□□ -1.43
Hoxb3P09026 Gm29232-201ENSMUST00000189100 297 ntTSL 5 BASIC6.11□□□□□ -1.43
Hoxb3P09026 Gm29350-201ENSMUST00000189141 541 ntBASIC6.11□□□□□ -1.43
Hoxb3P09026 Gm37511-201ENSMUST00000192901 294 ntBASIC6.11□□□□□ -1.43
Hoxb3P09026 Gm43021-201ENSMUST00000198692 337 ntTSL 3 BASIC6.11□□□□□ -1.43
Hoxb3P09026 Igkv12-40-201ENSMUST00000199208 347 ntBASIC6.11□□□□□ -1.43
Hoxb3P09026 Gm42579-201ENSMUST00000200512 734 ntBASIC6.11□□□□□ -1.43
Hoxb3P09026 Gm2607-201ENSMUST00000212389 627 ntBASIC6.11□□□□□ -1.43
Hoxb3P09026 2900078I11Rik-201ENSMUST00000214556 999 ntBASIC6.11□□□□□ -1.43
Hoxb3P09026 Lcn4-201ENSMUST00000028283 774 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Hoxb3P09026 Mir31-201ENSMUST00000083474 106 ntBASIC6.11□□□□□ -1.43
Hoxb3P09026 Gm26164-201ENSMUST00000083793 104 ntBASIC6.11□□□□□ -1.43
Hoxb3P09026 Csnk1g1-201ENSMUST00000034949 7208 ntAPPRIS P2 TSL 1 (best) BASIC6.11□□□□□ -1.43
Hoxb3P09026 A730020M07Rik-202ENSMUST00000196621 2370 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Hoxb3P09026 Cd226-201ENSMUST00000037142 2357 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Hoxb3P09026 Gm9602-201ENSMUST00000163325 2062 ntAPPRIS P5 TSL 1 (best) BASIC6.11□□□□□ -1.43
Hoxb3P09026 Zfp442-201ENSMUST00000109916 2922 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Hoxb3P09026 Gm3383-202ENSMUST00000112758 1813 ntAPPRIS P5 TSL 5 BASIC6.11□□□□□ -1.43
Hoxb3P09026 Gm3696-201ENSMUST00000167923 1814 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Hoxb3P09026 Gm3194-202ENSMUST00000180867 1813 ntAPPRIS P5 TSL 5 BASIC6.11□□□□□ -1.43
Hoxb3P09026 Mrps25-203ENSMUST00000140438 6073 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Hoxb3P09026 Rfx4-205ENSMUST00000166696 3332 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Hoxb3P09026 Xpnpep3-203ENSMUST00000163754 5383 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Hoxb3P09026 Mfap1a-201ENSMUST00000089926 4198 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Hoxb3P09026 Cd200r4-202ENSMUST00000176321 2005 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Hoxb3P09026 Birc6-223ENSMUST00000183224 14562 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
Hoxb3P09026 Unc13b-216ENSMUST00000207708 6574 ntTSL 5 BASIC6.1□□□□□ -1.43
Hoxb3P09026 Ddx58-201ENSMUST00000037907 3874 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Hoxb3P09026 Vmn2r98-201ENSMUST00000170424 2574 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Hoxb3P09026 Gm14101-201ENSMUST00000121502 473 ntBASIC6.1□□□□□ -1.43
Hoxb3P09026 Gm11712-201ENSMUST00000129139 367 ntTSL 5 BASIC6.1□□□□□ -1.43
Hoxb3P09026 4933406D12Rik-201ENSMUST00000147212 737 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Hoxb3P09026 Gm16155-201ENSMUST00000155180 338 ntTSL 3 BASIC6.1□□□□□ -1.43
Hoxb3P09026 Gm23892-201ENSMUST00000158105 130 ntBASIC6.1□□□□□ -1.43
Hoxb3P09026 Gm23224-201ENSMUST00000158122 271 ntBASIC6.1□□□□□ -1.43
Hoxb3P09026 Gm25489-201ENSMUST00000158727 141 ntBASIC6.1□□□□□ -1.43
Hoxb3P09026 Gm23050-201ENSMUST00000158775 165 ntBASIC6.1□□□□□ -1.43
Hoxb3P09026 Gm18343-201ENSMUST00000172802 604 ntBASIC6.1□□□□□ -1.43
Hoxb3P09026 Gm27896-201ENSMUST00000175162 317 ntBASIC6.1□□□□□ -1.43
Hoxb3P09026 Mir3112-201ENSMUST00000175431 82 ntBASIC6.1□□□□□ -1.43
Hoxb3P09026 Gm26057-201ENSMUST00000178099 165 ntBASIC6.1□□□□□ -1.43
Hoxb3P09026 Gm27997-201ENSMUST00000184942 69 ntBASIC6.1□□□□□ -1.43
Hoxb3P09026 Gm21673-201ENSMUST00000186640 436 ntBASIC6.1□□□□□ -1.43
Hoxb3P09026 Gm21135-201ENSMUST00000189023 436 ntBASIC6.1□□□□□ -1.43
Hoxb3P09026 Gm37701-201ENSMUST00000192947 1100 ntBASIC6.1□□□□□ -1.43
Hoxb3P09026 Gm37235-201ENSMUST00000195171 59 ntBASIC6.1□□□□□ -1.43
Hoxb3P09026 Igkv3-12-1-201ENSMUST00000197093 351 ntBASIC6.1□□□□□ -1.43
Hoxb3P09026 Gm9332-201ENSMUST00000198431 730 ntBASIC6.1□□□□□ -1.43
Hoxb3P09026 Gm4714-201ENSMUST00000203395 279 ntBASIC6.1□□□□□ -1.43
Hoxb3P09026 Gm44077-201ENSMUST00000203453 435 ntTSL 2 BASIC6.1□□□□□ -1.43
Hoxb3P09026 Gm45169-201ENSMUST00000205717 639 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Hoxb3P09026 AC127337.1-201ENSMUST00000220423 625 ntTSL 2 BASIC6.1□□□□□ -1.43
Hoxb3P09026 AC091783.2-201ENSMUST00000224626 740 ntBASIC6.1□□□□□ -1.43
Hoxb3P09026 AC113031.4-201ENSMUST00000228381 514 ntBASIC6.1□□□□□ -1.43
Hoxb3P09026 2610044O15Rik8-201ENSMUST00000079272 264 ntTSL 5 BASIC6.1□□□□□ -1.43
Hoxb3P09026 Gabpb2-202ENSMUST00000098873 8272 ntAPPRIS P2 TSL 5 BASIC6.1□□□□□ -1.43
Hoxb3P09026 Pcdh15-215ENSMUST00000131321 6926 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
Hoxb3P09026 Gm12080-201ENSMUST00000119821 1883 ntBASIC6.1□□□□□ -1.43
Hoxb3P09026 Gm43745-201ENSMUST00000198085 1883 ntBASIC6.1□□□□□ -1.43
Hoxb3P09026 Gm37174-201ENSMUST00000194699 3058 ntBASIC6.1□□□□□ -1.43
Hoxb3P09026 Serpina9-201ENSMUST00000058464 3571 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Hoxb3P09026 Gm4221-202ENSMUST00000181765 2988 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Hoxb3P09026 Cpsf6-201ENSMUST00000069168 6526 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Hoxb3P09026 Klra2-201ENSMUST00000032306 1799 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 63.2 ms