Protein–RNA interactions for Protein: O88207

Col5a1, Collagen alpha-1(V) chain, mousemouse

Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1O88207 Vmn1r-ps56-201ENSMUST00000172769 965 ntBASIC3.3□□□□□ -1.88
Col5a1O88207 Gm26991-201ENSMUST00000180950 620 ntBASIC3.3□□□□□ -1.88
Col5a1O88207 Gm28954-201ENSMUST00000190031 437 ntTSL 5 BASIC3.3□□□□□ -1.88
Col5a1O88207 Gm31942-202ENSMUST00000195375 437 ntTSL 5 BASIC3.3□□□□□ -1.88
Col5a1O88207 Gm43825-201ENSMUST00000199650 734 ntBASIC3.3□□□□□ -1.88
Col5a1O88207 Gm6649-201ENSMUST00000199743 1165 ntBASIC3.3□□□□□ -1.88
Col5a1O88207 AC165164.1-202ENSMUST00000219324 649 ntTSL 3 BASIC3.3□□□□□ -1.88
Col5a1O88207 Gm40271-201ENSMUST00000221752 422 ntTSL 3 BASIC3.3□□□□□ -1.88
Col5a1O88207 AC107757.3-201ENSMUST00000226312 535 ntBASIC3.3□□□□□ -1.88
Col5a1O88207 Creg1-201ENSMUST00000040298 425 ntTSL 3 BASIC3.3□□□□□ -1.88
Col5a1O88207 Olfr357-201ENSMUST00000069578 1092 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Col5a1O88207 Snora70-201ENSMUST00000083047 137 ntBASIC3.3□□□□□ -1.88
Col5a1O88207 Olfr606-201ENSMUST00000098200 960 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Col5a1O88207 Olfr1046-201ENSMUST00000099902 951 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Col5a1O88207 Cep290-206ENSMUST00000219765 7985 ntTSL 5 BASIC3.3□□□□□ -1.88
Col5a1O88207 9530051G07Rik-201ENSMUST00000127673 4414 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
Col5a1O88207 Olfr676-204ENSMUST00000219602 2802 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Col5a1O88207 Gm2033-201ENSMUST00000210753 2287 ntBASIC3.3□□□□□ -1.88
Col5a1O88207 Zfp979-201ENSMUST00000037565 2558 ntAPPRIS P1 TSL 2 BASIC3.3□□□□□ -1.88
Col5a1O88207 Zfp595-203ENSMUST00000168892 4040 ntAPPRIS P2 TSL 1 (best) BASIC3.3□□□□□ -1.88
Col5a1O88207 AC153522.2-201ENSMUST00000218389 3853 ntBASIC3.3□□□□□ -1.88
Col5a1O88207 Vmn2r65-201ENSMUST00000044583 2538 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Col5a1O88207 Gm13650-201ENSMUST00000117729 433 ntBASIC3.3□□□□□ -1.88
Col5a1O88207 Gm12543-201ENSMUST00000120410 543 ntBASIC3.3□□□□□ -1.88
Col5a1O88207 Gm14649-201ENSMUST00000121814 324 ntBASIC3.3□□□□□ -1.88
Col5a1O88207 Gm16158-201ENSMUST00000123509 785 ntTSL 5 BASIC3.3□□□□□ -1.88
Col5a1O88207 Gm14135-201ENSMUST00000135438 591 ntTSL 3 BASIC3.3□□□□□ -1.88
Col5a1O88207 Vmn1r163-201ENSMUST00000164537 924 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Col5a1O88207 Vmn1r117-201ENSMUST00000166937 924 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Col5a1O88207 Vmn1r128-201ENSMUST00000169165 924 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Col5a1O88207 Vmn1r135-201ENSMUST00000170931 924 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Col5a1O88207 Vmn1r143-201ENSMUST00000171622 924 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Col5a1O88207 Vmn1r-ps71-201ENSMUST00000172648 924 ntBASIC3.3□□□□□ -1.88
Col5a1O88207 Gm27903-201ENSMUST00000175482 126 ntBASIC3.3□□□□□ -1.88
Col5a1O88207 1700063O14Rik-201ENSMUST00000187067 492 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
Col5a1O88207 Rhoay-ps3-201ENSMUST00000187648 576 ntBASIC3.3□□□□□ -1.88
Col5a1O88207 Gm37279-201ENSMUST00000194630 338 ntTSL 5 BASIC3.3□□□□□ -1.88
Col5a1O88207 2210017I01Rik-201ENSMUST00000195278 822 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Col5a1O88207 Gm44633-201ENSMUST00000205925 439 ntTSL 3 BASIC3.3□□□□□ -1.88
Col5a1O88207 Gm8681-201ENSMUST00000219115 618 ntBASIC3.3□□□□□ -1.88
Col5a1O88207 Pate4-201ENSMUST00000034610 1072 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Col5a1O88207 Gm14636-202ENSMUST00000150801 5060 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
Col5a1O88207 Fam111a-204ENSMUST00000151307 3687 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
Col5a1O88207 Ccr2-201ENSMUST00000055918 2999 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
Col5a1O88207 Ccr9-205ENSMUST00000180093 4239 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
Col5a1O88207 Gm2396-202ENSMUST00000188232 3433 ntTSL 5 BASIC3.29□□□□□ -1.88
Col5a1O88207 Olfr652-203ENSMUST00000216131 4773 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Col5a1O88207 Gm8989-201ENSMUST00000184782 7275 ntBASIC3.29□□□□□ -1.88
Col5a1O88207 Gm10558-201ENSMUST00000147494 1661 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
Col5a1O88207 Bpifc-202ENSMUST00000105304 451 ntTSL 5 BASIC3.29□□□□□ -1.88
Col5a1O88207 Olfr1235-ps1-201ENSMUST00000117898 314 ntBASIC3.29□□□□□ -1.88
Col5a1O88207 Gm14647-201ENSMUST00000119392 680 ntBASIC3.29□□□□□ -1.88
Col5a1O88207 Gm11704-201ENSMUST00000120031 214 ntBASIC3.29□□□□□ -1.88
Col5a1O88207 Gm26027-201ENSMUST00000122725 268 ntBASIC3.29□□□□□ -1.88
Col5a1O88207 Vmn1r-ps17-201ENSMUST00000175797 894 ntBASIC3.29□□□□□ -1.88
Col5a1O88207 Gm32447-201ENSMUST00000194265 697 ntBASIC3.29□□□□□ -1.88
Col5a1O88207 Gm38093-201ENSMUST00000195210 710 ntTSL 3 BASIC3.29□□□□□ -1.88
Col5a1O88207 Olfr1244-ps1-201ENSMUST00000213226 683 ntBASIC3.29□□□□□ -1.88
Col5a1O88207 AC117656.3-202ENSMUST00000225842 1055 ntBASIC3.29□□□□□ -1.88
Col5a1O88207 Prr32-201ENSMUST00000040002 1110 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
Col5a1O88207 Vmn1r26-201ENSMUST00000049694 1020 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
Col5a1O88207 Cd52-201ENSMUST00000000696 514 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
Col5a1O88207 AC122840.2-201ENSMUST00000221030 2659 ntBASIC3.29□□□□□ -1.88
Col5a1O88207 Nlrp4b-202ENSMUST00000117413 3326 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
Col5a1O88207 Gm42905-201ENSMUST00000196237 1611 ntBASIC3.29□□□□□ -1.88
Col5a1O88207 Olfr612-202ENSMUST00000214269 2420 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Col5a1O88207 Abi3bp-202ENSMUST00000096012 4387 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
Col5a1O88207 Jrkl-201ENSMUST00000110582 3223 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
Col5a1O88207 Gm11746-201ENSMUST00000119843 821 ntBASIC3.28□□□□□ -1.88
Col5a1O88207 Uqcrh-ps2-201ENSMUST00000121613 269 ntBASIC3.28□□□□□ -1.88
Col5a1O88207 Gm26254-201ENSMUST00000122491 118 ntBASIC3.28□□□□□ -1.88
Col5a1O88207 Gm15522-201ENSMUST00000134467 785 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
Col5a1O88207 Gm23028-201ENSMUST00000158773 265 ntBASIC3.28□□□□□ -1.88
Col5a1O88207 Gm17218-201ENSMUST00000165911 410 ntTSL 3 BASIC3.28□□□□□ -1.88
Col5a1O88207 V1rd19-201ENSMUST00000173571 1157 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
Col5a1O88207 Mir3070b-201ENSMUST00000175205 89 ntBASIC3.28□□□□□ -1.88
Col5a1O88207 Gm20767-201ENSMUST00000179071 510 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
Col5a1O88207 Gm42468-201ENSMUST00000200360 703 ntTSL 3 BASIC3.28□□□□□ -1.88
Col5a1O88207 Gm44223-201ENSMUST00000204854 114 ntBASIC3.28□□□□□ -1.88
Col5a1O88207 AC167250.1-201ENSMUST00000213739 3813 ntBASIC3.28□□□□□ -1.88
Col5a1O88207 AC160931.2-201ENSMUST00000221445 351 ntBASIC3.28□□□□□ -1.88
Col5a1O88207 Gm26226-201ENSMUST00000082509 116 ntBASIC3.28□□□□□ -1.88
Col5a1O88207 Olfr1211-203ENSMUST00000213412 4173 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
Col5a1O88207 Arhgap12-205ENSMUST00000182066 4506 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
Col5a1O88207 Olfr586-202ENSMUST00000211075 4562 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
Col5a1O88207 Dnah7b-201ENSMUST00000069293 12314 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
Col5a1O88207 Cubn-201ENSMUST00000091436 11262 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
Col5a1O88207 Sucnr1-201ENSMUST00000029326 1571 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
Col5a1O88207 Hfm1-202ENSMUST00000117588 4870 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
Col5a1O88207 Olfr741-202ENSMUST00000205518 3406 ntAPPRIS P1 TSL 2 BASIC3.28□□□□□ -1.88
Col5a1O88207 Gm36298-201ENSMUST00000223394 1732 ntBASIC3.28□□□□□ -1.88
Col5a1O88207 Gm40020-201ENSMUST00000215677 1635 ntBASIC3.28□□□□□ -1.88
Col5a1O88207 Gm44675-201ENSMUST00000208188 2927 ntBASIC3.28□□□□□ -1.88
Col5a1O88207 Gm45176-201ENSMUST00000207696 4096 ntBASIC3.28□□□□□ -1.88
Col5a1O88207 Gm11110-201ENSMUST00000112915 1013 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
Col5a1O88207 Gm12998-201ENSMUST00000122445 789 ntBASIC3.28□□□□□ -1.88
Col5a1O88207 Gm24936-201ENSMUST00000122598 247 ntBASIC3.28□□□□□ -1.88
Col5a1O88207 4933416E03Rik-201ENSMUST00000133091 1126 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
Col5a1O88207 Gm22322-201ENSMUST00000157151 111 ntBASIC3.28□□□□□ -1.88
Col5a1O88207 Mir6715-201ENSMUST00000184990 57 ntBASIC3.28□□□□□ -1.88
Retrieved 100 of 76,532 protein–RNA pairs in 96.1 ms