Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 AC159809.1-201ENSMUST00000216235 520 ntTSL 5 BASIC4.81□□□□□ -1.64
Pcdh1F7BJK1 Gm29785-201ENSMUST00000217033 383 ntBASIC4.81□□□□□ -1.64
Pcdh1F7BJK1 Prl2c5-201ENSMUST00000021778 844 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
Pcdh1F7BJK1 AC122905.2-201ENSMUST00000220325 269 ntBASIC4.81□□□□□ -1.64
Pcdh1F7BJK1 AC122924.2-201ENSMUST00000220799 298 ntBASIC4.81□□□□□ -1.64
Pcdh1F7BJK1 Gm46996-201ENSMUST00000220924 408 ntBASIC4.81□□□□□ -1.64
Pcdh1F7BJK1 Muc16-201ENSMUST00000034653 1035 ntTSL 2 BASIC4.81□□□□□ -1.64
Pcdh1F7BJK1 Mup5-201ENSMUST00000082287 925 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Pcdh1F7BJK1 Gm26439-201ENSMUST00000082592 106 ntBASIC4.81□□□□□ -1.64
Pcdh1F7BJK1 Gm22807-201ENSMUST00000082737 129 ntBASIC4.81□□□□□ -1.64
Pcdh1F7BJK1 Gm22229-201ENSMUST00000082987 108 ntBASIC4.81□□□□□ -1.64
Pcdh1F7BJK1 Olfr1095-201ENSMUST00000099874 927 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
Pcdh1F7BJK1 Gm18163-201ENSMUST00000197877 1643 ntBASIC4.81□□□□□ -1.64
Pcdh1F7BJK1 Vmn1r184-204ENSMUST00000227534 4807 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
Pcdh1F7BJK1 Vmn2r42-204ENSMUST00000142934 3694 ntTSL 5 BASIC4.81□□□□□ -1.64
Pcdh1F7BJK1 Gm37890-201ENSMUST00000195610 3992 ntBASIC4.81□□□□□ -1.64
Pcdh1F7BJK1 Gm42583-201ENSMUST00000202678 6700 ntBASIC4.81□□□□□ -1.64
Pcdh1F7BJK1 Vmn2r109-201ENSMUST00000167093 2577 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Pcdh1F7BJK1 Vmn2r-ps102-201ENSMUST00000222577 2203 ntBASIC4.81□□□□□ -1.64
Pcdh1F7BJK1 Ogt-202ENSMUST00000119299 3840 ntAPPRIS ALT1 TSL 5 BASIC4.81□□□□□ -1.64
Pcdh1F7BJK1 Olfr516-202ENSMUST00000216092 1493 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Pcdh1F7BJK1 Slfn14-201ENSMUST00000163961 3706 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Pcdh1F7BJK1 Scel-201ENSMUST00000095576 2424 ntAPPRIS P2 TSL 1 (best) BASIC4.81□□□□□ -1.64
Pcdh1F7BJK1 Olfr698-204ENSMUST00000216255 4024 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Pcdh1F7BJK1 Gm2366-201ENSMUST00000180753 3982 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Pcdh1F7BJK1 Olfr774-202ENSMUST00000203248 1429 ntAPPRIS P1 TSL 3 BASIC4.8□□□□□ -1.64
Pcdh1F7BJK1 Vmn1r200-205ENSMUST00000228726 5525 ntAPPRIS P2 BASIC4.8□□□□□ -1.64
Pcdh1F7BJK1 Gm3867-202ENSMUST00000181639 2007 ntTSL 2 BASIC4.8□□□□□ -1.64
Pcdh1F7BJK1 Gm37762-201ENSMUST00000194515 3561 ntBASIC4.8□□□□□ -1.64
Pcdh1F7BJK1 Olfr473-202ENSMUST00000217618 2319 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
Pcdh1F7BJK1 Olfr133-203ENSMUST00000215078 3130 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Pcdh1F7BJK1 Cyp4a31-202ENSMUST00000030486 2509 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Pcdh1F7BJK1 Gm4954-201ENSMUST00000135069 1601 ntBASIC4.8□□□□□ -1.64
Pcdh1F7BJK1 AC112274.1-201ENSMUST00000218957 4274 ntBASIC4.8□□□□□ -1.64
Pcdh1F7BJK1 Wwp1-201ENSMUST00000035982 4832 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Pcdh1F7BJK1 Gm38243-201ENSMUST00000194737 1567 ntBASIC4.8□□□□□ -1.64
Pcdh1F7BJK1 Sub1-202ENSMUST00000110504 675 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Pcdh1F7BJK1 Olfr1165-ps-201ENSMUST00000117860 950 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
Pcdh1F7BJK1 Gm15772-201ENSMUST00000118533 438 ntBASIC4.8□□□□□ -1.64
Pcdh1F7BJK1 Gm12231-201ENSMUST00000119447 695 ntBASIC4.8□□□□□ -1.64
Pcdh1F7BJK1 Gm11742-201ENSMUST00000119903 233 ntBASIC4.8□□□□□ -1.64
Pcdh1F7BJK1 Gm14852-201ENSMUST00000120065 647 ntBASIC4.8□□□□□ -1.64
Pcdh1F7BJK1 Gm14927-201ENSMUST00000120283 454 ntBASIC4.8□□□□□ -1.64
Pcdh1F7BJK1 Gm5384-201ENSMUST00000120313 463 ntBASIC4.8□□□□□ -1.64
Pcdh1F7BJK1 Gm25290-201ENSMUST00000122796 144 ntBASIC4.8□□□□□ -1.64
Pcdh1F7BJK1 Zfp783-203ENSMUST00000130463 537 ntTSL 2 BASIC4.8□□□□□ -1.64
Pcdh1F7BJK1 Gm15017-201ENSMUST00000141989 632 ntTSL 5 BASIC4.8□□□□□ -1.64
Pcdh1F7BJK1 Gm23124-201ENSMUST00000157650 107 ntBASIC4.8□□□□□ -1.64
Pcdh1F7BJK1 AY512915-204ENSMUST00000162315 676 ntTSL 3 BASIC4.8□□□□□ -1.64
Pcdh1F7BJK1 Gm17196-201ENSMUST00000164074 345 ntTSL 5 BASIC4.8□□□□□ -1.64
Pcdh1F7BJK1 Gm17081-201ENSMUST00000167363 478 ntBASIC4.8□□□□□ -1.64
Pcdh1F7BJK1 Gm8807-201ENSMUST00000179328 492 ntBASIC4.8□□□□□ -1.64
Pcdh1F7BJK1 Bsph2-ps-201ENSMUST00000183795 241 ntBASIC4.8□□□□□ -1.64
Pcdh1F7BJK1 Gm3428-202ENSMUST00000184555 416 ntTSL 5 BASIC4.8□□□□□ -1.64
Pcdh1F7BJK1 Gm6712-202ENSMUST00000186431 526 ntTSL 5 BASIC4.8□□□□□ -1.64
Pcdh1F7BJK1 Gm17916-202ENSMUST00000187634 1187 ntBASIC4.8□□□□□ -1.64
Pcdh1F7BJK1 Gm28640-201ENSMUST00000190918 550 ntBASIC4.8□□□□□ -1.64
Pcdh1F7BJK1 Gm17954-201ENSMUST00000195893 607 ntBASIC4.8□□□□□ -1.64
Pcdh1F7BJK1 Ranbp2-ps11-201ENSMUST00000197185 387 ntBASIC4.8□□□□□ -1.64
Pcdh1F7BJK1 Gm2623-201ENSMUST00000199229 286 ntBASIC4.8□□□□□ -1.64
Pcdh1F7BJK1 E230029C05Rik-206ENSMUST00000208547 814 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Pcdh1F7BJK1 4930518J21Rik-201ENSMUST00000209557 573 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Pcdh1F7BJK1 Gm7692-201ENSMUST00000213534 409 ntBASIC4.8□□□□□ -1.64
Pcdh1F7BJK1 Gm18587-201ENSMUST00000213736 841 ntBASIC4.8□□□□□ -1.64
Pcdh1F7BJK1 1700054O05Rik-201ENSMUST00000214107 555 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Pcdh1F7BJK1 Gm7607-201ENSMUST00000214920 518 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Pcdh1F7BJK1 Gm18541-201ENSMUST00000215935 538 ntBASIC4.8□□□□□ -1.64
Pcdh1F7BJK1 Gm18120-201ENSMUST00000220079 511 ntBASIC4.8□□□□□ -1.64
Pcdh1F7BJK1 Gm40392-201ENSMUST00000220656 562 ntTSL 5 BASIC4.8□□□□□ -1.64
Pcdh1F7BJK1 AC121599.1-201ENSMUST00000224276 449 ntBASIC4.8□□□□□ -1.64
Pcdh1F7BJK1 Olfr1023-201ENSMUST00000056408 936 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
Pcdh1F7BJK1 Gm25134-201ENSMUST00000082646 160 ntBASIC4.8□□□□□ -1.64
Pcdh1F7BJK1 Gm22829-201ENSMUST00000083771 106 ntBASIC4.8□□□□□ -1.64
Pcdh1F7BJK1 Platr21-201ENSMUST00000126339 3511 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Pcdh1F7BJK1 Eya4-201ENSMUST00000074366 3488 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Pcdh1F7BJK1 Olfr403-202ENSMUST00000206114 3444 ntAPPRIS P1 TSL 3 BASIC4.8□□□□□ -1.64
Pcdh1F7BJK1 Zfp758-203ENSMUST00000121315 2860 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
Pcdh1F7BJK1 Gabra3-202ENSMUST00000114554 1790 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
Pcdh1F7BJK1 Olfr1000-203ENSMUST00000216571 2028 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Pcdh1F7BJK1 Abca16-202ENSMUST00000120490 5088 ntAPPRIS P5 TSL 5 BASIC4.8□□□□□ -1.64
Pcdh1F7BJK1 Zfp607a-203ENSMUST00000205715 4031 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Pcdh1F7BJK1 1700129L04Rik-202ENSMUST00000189291 1401 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Pcdh1F7BJK1 Gm19131-202ENSMUST00000203464 3208 ntBASIC4.8□□□□□ -1.64
Pcdh1F7BJK1 Olfr1443-203ENSMUST00000215134 3995 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Pcdh1F7BJK1 Aadacl3-201ENSMUST00000105749 3153 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Pcdh1F7BJK1 Nlrp5-203ENSMUST00000108441 3375 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
Pcdh1F7BJK1 Gm44567-201ENSMUST00000205645 2631 ntBASIC4.79□□□□□ -1.64
Pcdh1F7BJK1 Gm10933-201ENSMUST00000221891 1861 ntBASIC4.79□□□□□ -1.64
Pcdh1F7BJK1 Vmn1r6-203ENSMUST00000227131 8330 ntAPPRIS P2 BASIC4.79□□□□□ -1.64
Pcdh1F7BJK1 LOC102637012-201ENSMUST00000217248 2562 ntBASIC4.79□□□□□ -1.64
Pcdh1F7BJK1 Gm14496-201ENSMUST00000071760 2550 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Pcdh1F7BJK1 Olfr920-201ENSMUST00000074740 5711 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Pcdh1F7BJK1 Gm20756-202ENSMUST00000201324 1565 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Pcdh1F7BJK1 Epha7-203ENSMUST00000108191 6615 ntAPPRIS ALT1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Pcdh1F7BJK1 Olfr13-202ENSMUST00000216179 3677 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Pcdh1F7BJK1 Olfr733-204ENSMUST00000216195 3669 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Pcdh1F7BJK1 Gm42704-201ENSMUST00000196875 1778 ntBASIC4.79□□□□□ -1.64
Pcdh1F7BJK1 Gm12845-201ENSMUST00000203629 1767 ntAPPRIS P5 TSL 5 BASIC4.79□□□□□ -1.64
Pcdh1F7BJK1 Clec4a2-202ENSMUST00000041779 2481 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
Pcdh1F7BJK1 Xist-201ENSMUST00000127786 17769 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 79.6 ms