Protein–RNA interactions for Protein: E9PXC0

Srp54b, Signal recognition particle 54 kDa protein, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp54bE9PXC0 Gm18306-201ENSMUST00000207338 569 ntBASIC4.12□□□□□ -1.75
Srp54bE9PXC0 Gm45409-201ENSMUST00000211486 252 ntBASIC4.12□□□□□ -1.75
Srp54bE9PXC0 Gm31717-201ENSMUST00000213044 668 ntTSL 5 BASIC4.12□□□□□ -1.75
Srp54bE9PXC0 AC147256.1-201ENSMUST00000221589 626 ntTSL 3 BASIC4.12□□□□□ -1.75
Srp54bE9PXC0 AC154424.1-201ENSMUST00000225883 799 ntBASIC4.12□□□□□ -1.75
Srp54bE9PXC0 Senp7-201ENSMUST00000049128 1190 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
Srp54bE9PXC0 Vmn1r26-201ENSMUST00000049694 1020 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
Srp54bE9PXC0 Olfr186-201ENSMUST00000062380 1005 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
Srp54bE9PXC0 Olfr873-202ENSMUST00000075717 991 ntAPPRIS ALT2 TSL 2 BASIC4.12□□□□□ -1.75
Srp54bE9PXC0 Olfr1466-201ENSMUST00000075868 933 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
Srp54bE9PXC0 Gm23510-201ENSMUST00000083083 163 ntBASIC4.12□□□□□ -1.75
Srp54bE9PXC0 Mir202-201ENSMUST00000083568 72 ntBASIC4.12□□□□□ -1.75
Srp54bE9PXC0 Xrn1-202ENSMUST00000185633 10256 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
Srp54bE9PXC0 Vmn1r171-204ENSMUST00000226733 2918 ntAPPRIS ALT2 BASIC4.12□□□□□ -1.75
Srp54bE9PXC0 Gm12586-201ENSMUST00000117328 1316 ntBASIC4.12□□□□□ -1.75
Srp54bE9PXC0 Vmn1r77-203ENSMUST00000227320 8308 ntAPPRIS P2 BASIC4.12□□□□□ -1.75
Srp54bE9PXC0 Foxr2-202ENSMUST00000163801 3072 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
Srp54bE9PXC0 4930544M13Rik-202ENSMUST00000181553 1403 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
Srp54bE9PXC0 0610010F05Rik-202ENSMUST00000093267 3646 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
Srp54bE9PXC0 Olfr1082-201ENSMUST00000215600 1620 ntAPPRIS P1 TSL 3 BASIC4.11□□□□□ -1.75
Srp54bE9PXC0 Gm773-201ENSMUST00000101561 951 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
Srp54bE9PXC0 Zfp965-201ENSMUST00000109002 957 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
Srp54bE9PXC0 Gm13737-201ENSMUST00000119793 232 ntBASIC4.11□□□□□ -1.75
Srp54bE9PXC0 Gm15926-201ENSMUST00000120492 550 ntBASIC4.11□□□□□ -1.75
Srp54bE9PXC0 Gm11418-201ENSMUST00000156193 626 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
Srp54bE9PXC0 Gm22968-201ENSMUST00000157955 118 ntBASIC4.11□□□□□ -1.75
Srp54bE9PXC0 Gm24636-201ENSMUST00000158673 288 ntBASIC4.11□□□□□ -1.75
Srp54bE9PXC0 Vmn2r-ps126-201ENSMUST00000176711 1149 ntBASIC4.11□□□□□ -1.75
Srp54bE9PXC0 Gm20826-201ENSMUST00000179256 758 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
Srp54bE9PXC0 Gm20834-201ENSMUST00000179558 684 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
Srp54bE9PXC0 Mir6345-201ENSMUST00000184286 128 ntBASIC4.11□□□□□ -1.75
Srp54bE9PXC0 Gm27190-201ENSMUST00000184890 542 ntBASIC4.11□□□□□ -1.75
Srp54bE9PXC0 Gm7634-201ENSMUST00000185778 553 ntBASIC4.11□□□□□ -1.75
Srp54bE9PXC0 Gm17777-201ENSMUST00000189740 1276 ntBASIC4.11□□□□□ -1.75
Srp54bE9PXC0 2810025M15Rik-203ENSMUST00000189791 251 ntBASIC4.11□□□□□ -1.75
Srp54bE9PXC0 Gm19774-201ENSMUST00000190667 114 ntBASIC4.11□□□□□ -1.75
Srp54bE9PXC0 Gm21006-201ENSMUST00000196930 667 ntBASIC4.11□□□□□ -1.75
Srp54bE9PXC0 Gm43841-201ENSMUST00000199491 586 ntBASIC4.11□□□□□ -1.75
Srp54bE9PXC0 Gm42474-201ENSMUST00000201073 505 ntBASIC4.11□□□□□ -1.75
Srp54bE9PXC0 Gm8820-201ENSMUST00000204077 571 ntBASIC4.11□□□□□ -1.75
Srp54bE9PXC0 Klk1b18-ps-201ENSMUST00000205780 167 ntBASIC4.11□□□□□ -1.75
Srp54bE9PXC0 Gm44681-201ENSMUST00000208447 842 ntBASIC4.11□□□□□ -1.75
Srp54bE9PXC0 Gm6303-201ENSMUST00000210123 471 ntBASIC4.11□□□□□ -1.75
Srp54bE9PXC0 Gm45539-201ENSMUST00000210313 428 ntBASIC4.11□□□□□ -1.75
Srp54bE9PXC0 Fth-ps3-201ENSMUST00000210405 358 ntBASIC4.11□□□□□ -1.75
Srp54bE9PXC0 Gm3690-201ENSMUST00000211341 262 ntBASIC4.11□□□□□ -1.75
Srp54bE9PXC0 Gm17917-201ENSMUST00000218561 953 ntBASIC4.11□□□□□ -1.75
Srp54bE9PXC0 Fkbp1b-202ENSMUST00000219880 246 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
Srp54bE9PXC0 CT030657.1-201ENSMUST00000222397 378 ntTSL 5 BASIC4.11□□□□□ -1.75
Srp54bE9PXC0 AC140344.1-201ENSMUST00000223384 387 ntBASIC4.11□□□□□ -1.75
Srp54bE9PXC0 AC135377.1-201ENSMUST00000223692 463 ntBASIC4.11□□□□□ -1.75
Srp54bE9PXC0 AC168059.1-201ENSMUST00000225846 841 ntBASIC4.11□□□□□ -1.75
Srp54bE9PXC0 Olfr1148-201ENSMUST00000077580 945 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
Srp54bE9PXC0 Olfr1490-201ENSMUST00000080162 951 ntAPPRIS P2 BASIC4.11□□□□□ -1.75
Srp54bE9PXC0 Gm26203-201ENSMUST00000082911 114 ntBASIC4.11□□□□□ -1.75
Srp54bE9PXC0 Gm43201-201ENSMUST00000195925 3416 ntBASIC4.11□□□□□ -1.75
Srp54bE9PXC0 AC153969.1-201ENSMUST00000214047 2605 ntBASIC4.11□□□□□ -1.75
Srp54bE9PXC0 Fgf7-202ENSMUST00000110442 2287 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
Srp54bE9PXC0 Vmn1r215-202ENSMUST00000228092 2790 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
Srp54bE9PXC0 AC123858.1-201ENSMUST00000226948 1874 ntBASIC4.11□□□□□ -1.75
Srp54bE9PXC0 Hm629797-201ENSMUST00000183645 2398 ntBASIC4.11□□□□□ -1.75
Srp54bE9PXC0 3110062G12Rik-201ENSMUST00000192113 1419 ntBASIC4.11□□□□□ -1.75
Srp54bE9PXC0 Csn1s1-201ENSMUST00000094641 1411 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
Srp54bE9PXC0 Fbxw28-201ENSMUST00000112039 1497 ntAPPRIS P4 TSL 1 (best) BASIC4.11□□□□□ -1.75
Srp54bE9PXC0 Gm28445-201ENSMUST00000187686 1498 ntTSL 5 BASIC4.11□□□□□ -1.75
Srp54bE9PXC0 Gm26853-201ENSMUST00000180757 4010 ntTSL 5 BASIC4.11□□□□□ -1.75
Srp54bE9PXC0 Dach2-202ENSMUST00000113378 2089 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
Srp54bE9PXC0 Gm9343-201ENSMUST00000209016 2609 ntBASIC4.1□□□□□ -1.75
Srp54bE9PXC0 Gm45483-201ENSMUST00000209845 1682 ntBASIC4.1□□□□□ -1.75
Srp54bE9PXC0 Gm8297-202ENSMUST00000171964 1759 ntAPPRIS P5 TSL 5 BASIC4.1□□□□□ -1.75
Srp54bE9PXC0 Vmn2r-ps45-201ENSMUST00000174138 2435 ntBASIC4.1□□□□□ -1.75
Srp54bE9PXC0 Gm5127-202ENSMUST00000101297 1809 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
Srp54bE9PXC0 Gpr34-202ENSMUST00000096492 1898 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
Srp54bE9PXC0 Traj12-201ENSMUST00000103729 58 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
Srp54bE9PXC0 Gm24281-201ENSMUST00000104234 136 ntBASIC4.1□□□□□ -1.75
Srp54bE9PXC0 Gm12311-201ENSMUST00000118803 374 ntBASIC4.1□□□□□ -1.75
Srp54bE9PXC0 Gm14586-201ENSMUST00000119571 408 ntBASIC4.1□□□□□ -1.75
Srp54bE9PXC0 Gm13170-201ENSMUST00000119716 643 ntBASIC4.1□□□□□ -1.75
Srp54bE9PXC0 Gm6373-201ENSMUST00000121026 360 ntBASIC4.1□□□□□ -1.75
Srp54bE9PXC0 Klra17-202ENSMUST00000122219 1167 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
Srp54bE9PXC0 Gm13686-201ENSMUST00000122851 350 ntTSL 3 BASIC4.1□□□□□ -1.75
Srp54bE9PXC0 Lce6a-201ENSMUST00000138403 795 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
Srp54bE9PXC0 Gm24960-201ENSMUST00000157923 90 ntBASIC4.1□□□□□ -1.75
Srp54bE9PXC0 Gm22135-201ENSMUST00000158752 108 ntBASIC4.1□□□□□ -1.75
Srp54bE9PXC0 Gm25447-201ENSMUST00000158997 128 ntBASIC4.1□□□□□ -1.75
Srp54bE9PXC0 Gm15974-201ENSMUST00000159103 531 ntBASIC4.1□□□□□ -1.75
Srp54bE9PXC0 Gm16430-201ENSMUST00000169006 615 ntAPPRIS P1 TSL 3 BASIC4.1□□□□□ -1.75
Srp54bE9PXC0 Zfp456-202ENSMUST00000172266 679 ntTSL 3 BASIC4.1□□□□□ -1.75
Srp54bE9PXC0 Gm5926-201ENSMUST00000177740 711 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
Srp54bE9PXC0 Gm10925-201ENSMUST00000189941 678 ntBASIC4.1□□□□□ -1.75
Srp54bE9PXC0 Gm37501-201ENSMUST00000192830 691 ntBASIC4.1□□□□□ -1.75
Srp54bE9PXC0 Gm37300-201ENSMUST00000193327 280 ntBASIC4.1□□□□□ -1.75
Srp54bE9PXC0 Gm38268-201ENSMUST00000195813 193 ntBASIC4.1□□□□□ -1.75
Srp54bE9PXC0 4930425K10Rik-201ENSMUST00000201190 745 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
Srp54bE9PXC0 Gm18598-201ENSMUST00000207724 597 ntBASIC4.1□□□□□ -1.75
Srp54bE9PXC0 Gm29674-201ENSMUST00000218791 1139 ntTSL 5 BASIC4.1□□□□□ -1.75
Srp54bE9PXC0 Gm29774-201ENSMUST00000219270 436 ntBASIC4.1□□□□□ -1.75
Srp54bE9PXC0 Gm30738-201ENSMUST00000221346 502 ntBASIC4.1□□□□□ -1.75
Srp54bE9PXC0 Olfr1437-201ENSMUST00000052558 1177 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
Srp54bE9PXC0 Tas2r139-201ENSMUST00000057686 960 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
Retrieved 100 of 76,532 protein–RNA pairs in 76.1 ms