Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 Olfr1191-ps1-201ENSMUST00000120598 4677 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
Trim8Q99PJ2 Gm44532-201ENSMUST00000207723 2598 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Trim8Q99PJ2 Stag2-202ENSMUST00000115072 5955 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
Trim8Q99PJ2 Rev3l-207ENSMUST00000164763 10399 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
Trim8Q99PJ2 Vmn2r110-201ENSMUST00000169559 2577 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
Trim8Q99PJ2 Brcc3-202ENSMUST00000114074 2473 ntAPPRIS P2 TSL 1 (best) BASIC4.97□□□□□ -1.61
Trim8Q99PJ2 Gm10256-201ENSMUST00000179404 1358 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
Trim8Q99PJ2 Gm22771-201ENSMUST00000104449 91 ntBASIC4.97□□□□□ -1.61
Trim8Q99PJ2 Mir466n-201ENSMUST00000104798 94 ntBASIC4.97□□□□□ -1.61
Trim8Q99PJ2 Mir467g-201ENSMUST00000116906 120 ntBASIC4.97□□□□□ -1.61
Trim8Q99PJ2 Gm15490-201ENSMUST00000119894 387 ntBASIC4.97□□□□□ -1.61
Trim8Q99PJ2 Gm16085-201ENSMUST00000144575 453 ntTSL 3 BASIC4.97□□□□□ -1.61
Trim8Q99PJ2 Gm23121-201ENSMUST00000157653 173 ntBASIC4.97□□□□□ -1.61
Trim8Q99PJ2 Gm25907-201ENSMUST00000158486 125 ntBASIC4.97□□□□□ -1.61
Trim8Q99PJ2 AC122858.3-202ENSMUST00000161721 433 ntTSL 5 BASIC4.97□□□□□ -1.61
Trim8Q99PJ2 Gm8374-201ENSMUST00000163826 672 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
Trim8Q99PJ2 Ear-ps5-201ENSMUST00000164700 463 ntBASIC4.97□□□□□ -1.61
Trim8Q99PJ2 Gm17142-201ENSMUST00000164933 645 ntBASIC4.97□□□□□ -1.61
Trim8Q99PJ2 Cylc2-203ENSMUST00000166749 1297 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Trim8Q99PJ2 Vmn2r-ps10-201ENSMUST00000176836 898 ntBASIC4.97□□□□□ -1.61
Trim8Q99PJ2 Vmn2r-ps8-201ENSMUST00000177088 898 ntBASIC4.97□□□□□ -1.61
Trim8Q99PJ2 Gm15099-201ENSMUST00000179833 573 ntTSL 5 BASIC4.97□□□□□ -1.61
Trim8Q99PJ2 Gm27234-201ENSMUST00000183362 581 ntTSL 5 BASIC4.97□□□□□ -1.61
Trim8Q99PJ2 Ranbp2-ps3-201ENSMUST00000183549 388 ntBASIC4.97□□□□□ -1.61
Trim8Q99PJ2 Gm28412-201ENSMUST00000187243 177 ntBASIC4.97□□□□□ -1.61
Trim8Q99PJ2 Gm21856-201ENSMUST00000187547 696 ntBASIC4.97□□□□□ -1.61
Trim8Q99PJ2 Gm28103-201ENSMUST00000188392 416 ntTSL 5 BASIC4.97□□□□□ -1.61
Trim8Q99PJ2 Gm28137-201ENSMUST00000191478 416 ntTSL 5 BASIC4.97□□□□□ -1.61
Trim8Q99PJ2 Gm29389-201ENSMUST00000191562 352 ntBASIC4.97□□□□□ -1.61
Trim8Q99PJ2 Trbv22-201ENSMUST00000191697 291 ntBASIC4.97□□□□□ -1.61
Trim8Q99PJ2 1700063I16Rik-201ENSMUST00000194611 611 ntBASIC4.97□□□□□ -1.61
Trim8Q99PJ2 Gm2077-201ENSMUST00000195017 319 ntBASIC4.97□□□□□ -1.61
Trim8Q99PJ2 Gm42694-201ENSMUST00000196951 358 ntBASIC4.97□□□□□ -1.61
Trim8Q99PJ2 Gm44376-201ENSMUST00000197570 128 ntBASIC4.97□□□□□ -1.61
Trim8Q99PJ2 Gm44071-201ENSMUST00000204180 448 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Trim8Q99PJ2 2210406H18Rik-201ENSMUST00000207806 1108 ntBASIC4.97□□□□□ -1.61
Trim8Q99PJ2 Gm33601-201ENSMUST00000210001 961 ntBASIC4.97□□□□□ -1.61
Trim8Q99PJ2 Olfr490-202ENSMUST00000211345 1275 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
Trim8Q99PJ2 Gm45593-201ENSMUST00000211415 752 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Trim8Q99PJ2 Gm45530-201ENSMUST00000211658 225 ntBASIC4.97□□□□□ -1.61
Trim8Q99PJ2 Gm45777-201ENSMUST00000213009 301 ntBASIC4.97□□□□□ -1.61
Trim8Q99PJ2 Olfr946-ps1-201ENSMUST00000217547 341 ntBASIC4.97□□□□□ -1.61
Trim8Q99PJ2 AL513022.1-201ENSMUST00000220489 504 ntTSL 5 BASIC4.97□□□□□ -1.61
Trim8Q99PJ2 AC155241.1-201ENSMUST00000222709 415 ntTSL 5 BASIC4.97□□□□□ -1.61
Trim8Q99PJ2 AC122858.3-201ENSMUST00000226341 740 ntBASIC4.97□□□□□ -1.61
Trim8Q99PJ2 AC122858.1-202ENSMUST00000228290 986 ntBASIC4.97□□□□□ -1.61
Trim8Q99PJ2 Tex36-201ENSMUST00000033275 958 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Trim8Q99PJ2 Sprr2d-201ENSMUST00000047477 681 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Trim8Q99PJ2 Trappc1-201ENSMUST00000060956 628 ntTSL 3 BASIC4.97□□□□□ -1.61
Trim8Q99PJ2 4930578G10Rik-201ENSMUST00000068158 614 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
Trim8Q99PJ2 Gm10282-201ENSMUST00000075602 1151 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
Trim8Q99PJ2 Gm23330-201ENSMUST00000082660 164 ntBASIC4.97□□□□□ -1.61
Trim8Q99PJ2 Gm23456-201ENSMUST00000083335 137 ntBASIC4.97□□□□□ -1.61
Trim8Q99PJ2 Mir20a-201ENSMUST00000083508 107 ntBASIC4.97□□□□□ -1.61
Trim8Q99PJ2 Olfr1185-ps1-201ENSMUST00000075025 3344 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
Trim8Q99PJ2 Hdx-202ENSMUST00000113422 9534 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Trim8Q99PJ2 Fscb-201ENSMUST00000059833 3361 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
Trim8Q99PJ2 Gm37767-201ENSMUST00000193239 1834 ntBASIC4.97□□□□□ -1.61
Trim8Q99PJ2 Gm37558-201ENSMUST00000193684 2983 ntBASIC4.97□□□□□ -1.61
Trim8Q99PJ2 Gm3972-201ENSMUST00000173960 2861 ntBASIC4.97□□□□□ -1.61
Trim8Q99PJ2 Gm16436-201ENSMUST00000121510 1607 ntBASIC4.97□□□□□ -1.61
Trim8Q99PJ2 B930086L07Rik-201ENSMUST00000209529 3738 ntBASIC4.97□□□□□ -1.61
Trim8Q99PJ2 Olfr1389-202ENSMUST00000216641 3707 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
Trim8Q99PJ2 Neat1-201ENSMUST00000173672 20771 ntBASIC4.97□□□□□ -1.61
Trim8Q99PJ2 Gm18852-201ENSMUST00000184149 3593 ntBASIC4.96□□□□□ -1.61
Trim8Q99PJ2 5830444F18Rik-201ENSMUST00000194009 1992 ntBASIC4.96□□□□□ -1.61
Trim8Q99PJ2 AC170999.1-201ENSMUST00000226359 1585 ntBASIC4.96□□□□□ -1.62
Trim8Q99PJ2 Gm43654-201ENSMUST00000200664 3417 ntBASIC4.96□□□□□ -1.62
Trim8Q99PJ2 Vmn2r4-201ENSMUST00000170280 2484 ntAPPRIS P2 TSL 5 BASIC4.96□□□□□ -1.62
Trim8Q99PJ2 Apob-202ENSMUST00000037811 13934 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
Trim8Q99PJ2 Gm43886-201ENSMUST00000205039 2386 ntBASIC4.96□□□□□ -1.62
Trim8Q99PJ2 Gm25213-201ENSMUST00000102388 113 ntBASIC4.96□□□□□ -1.62
Trim8Q99PJ2 Wap-201ENSMUST00000102910 551 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
Trim8Q99PJ2 Prl2b1-202ENSMUST00000102954 870 ntAPPRIS P2 TSL 1 (best) BASIC4.96□□□□□ -1.62
Trim8Q99PJ2 Trav16d-dv11-201ENSMUST00000103606 353 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
Trim8Q99PJ2 Gm22591-201ENSMUST00000104243 106 ntBASIC4.96□□□□□ -1.62
Trim8Q99PJ2 Mir879-201ENSMUST00000104703 76 ntBASIC4.96□□□□□ -1.62
Trim8Q99PJ2 Glrb-202ENSMUST00000107743 1101 ntTSL 5 BASIC4.96□□□□□ -1.62
Trim8Q99PJ2 Gm11859-201ENSMUST00000118099 455 ntBASIC4.96□□□□□ -1.62
Trim8Q99PJ2 Olfr405-ps1-201ENSMUST00000120649 936 ntBASIC4.96□□□□□ -1.62
Trim8Q99PJ2 Vmn1r-ps3-201ENSMUST00000122439 917 ntBASIC4.96□□□□□ -1.62
Trim8Q99PJ2 Gm23867-201ENSMUST00000122649 274 ntBASIC4.96□□□□□ -1.62
Trim8Q99PJ2 Gm12823-201ENSMUST00000134494 318 ntTSL 5 BASIC4.96□□□□□ -1.62
Trim8Q99PJ2 Tnfsf13os-202ENSMUST00000144033 578 ntTSL 5 BASIC4.96□□□□□ -1.62
Trim8Q99PJ2 Gm12971-201ENSMUST00000154720 511 ntTSL 5 BASIC4.96□□□□□ -1.62
Trim8Q99PJ2 Gm23032-201ENSMUST00000157995 107 ntBASIC4.96□□□□□ -1.62
Trim8Q99PJ2 Gm23318-201ENSMUST00000158000 108 ntBASIC4.96□□□□□ -1.62
Trim8Q99PJ2 Smdt1-202ENSMUST00000159054 294 ntTSL 5 BASIC4.96□□□□□ -1.62
Trim8Q99PJ2 Gm16577-201ENSMUST00000161579 471 ntTSL 3 BASIC4.96□□□□□ -1.62
Trim8Q99PJ2 Gm17669-201ENSMUST00000163749 465 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
Trim8Q99PJ2 Gm17155-201ENSMUST00000165969 473 ntBASIC4.96□□□□□ -1.62
Trim8Q99PJ2 Vmn1r-ps150-201ENSMUST00000176659 736 ntBASIC4.96□□□□□ -1.62
Trim8Q99PJ2 Gm27919-201ENSMUST00000185163 107 ntBASIC4.96□□□□□ -1.62
Trim8Q99PJ2 Gm6717-201ENSMUST00000185549 838 ntBASIC4.96□□□□□ -1.62
Trim8Q99PJ2 Gm21095-202ENSMUST00000185776 923 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
Trim8Q99PJ2 Gm20888-202ENSMUST00000186890 919 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
Trim8Q99PJ2 Gm6501-201ENSMUST00000187178 916 ntBASIC4.96□□□□□ -1.62
Trim8Q99PJ2 Gm28700-201ENSMUST00000187614 579 ntBASIC4.96□□□□□ -1.62
Trim8Q99PJ2 Gm29284-201ENSMUST00000188363 255 ntBASIC4.96□□□□□ -1.62
Trim8Q99PJ2 Gm29000-207ENSMUST00000190152 1160 ntTSL 5 BASIC4.96□□□□□ -1.62
Retrieved 100 of 76,532 protein–RNA pairs in 73.5 ms