Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 AC153801.1-201ENSMUST00000217904 947 ntBASIC3.59□□□□□ -1.83
Scrt1Q99M85 Trdn-207ENSMUST00000219931 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.83
Scrt1Q99M85 AC163354.1-203ENSMUST00000222356 643 ntTSL 5 BASIC3.59□□□□□ -1.83
Scrt1Q99M85 AC168880.1-201ENSMUST00000225113 707 ntBASIC3.59□□□□□ -1.83
Scrt1Q99M85 AC154239.2-201ENSMUST00000227859 233 ntBASIC3.59□□□□□ -1.83
Scrt1Q99M85 AC132918.1-201ENSMUST00000227877 925 ntBASIC3.59□□□□□ -1.83
Scrt1Q99M85 Olfr675-201ENSMUST00000073102 942 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
Scrt1Q99M85 Olfr847-201ENSMUST00000079620 939 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
Scrt1Q99M85 Tpbpb-201ENSMUST00000080766 850 ntAPPRIS P2 TSL 1 (best) BASIC3.59□□□□□ -1.83
Scrt1Q99M85 Gm23510-201ENSMUST00000083083 163 ntBASIC3.59□□□□□ -1.83
Scrt1Q99M85 n-R5s54-201ENSMUST00000083837 112 ntBASIC3.59□□□□□ -1.83
Scrt1Q99M85 Gm44562-201ENSMUST00000207194 1347 ntBASIC3.59□□□□□ -1.83
Scrt1Q99M85 Olfr613-201ENSMUST00000106888 5139 ntAPPRIS P1 BASIC3.59□□□□□ -1.84
Scrt1Q99M85 CAAA01194877.1-201ENSMUST00000213137 4233 ntBASIC3.59□□□□□ -1.84
Scrt1Q99M85 Olfr1309-206ENSMUST00000217452 5257 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
Scrt1Q99M85 Gm37999-201ENSMUST00000195178 1809 ntBASIC3.58□□□□□ -1.84
Scrt1Q99M85 Ddx3y-201ENSMUST00000091190 4600 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Scrt1Q99M85 Gm44847-201ENSMUST00000207104 1991 ntBASIC3.58□□□□□ -1.84
Scrt1Q99M85 Pik3c2a-201ENSMUST00000170430 8044 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
Scrt1Q99M85 Olfr1166-202ENSMUST00000217575 2004 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
Scrt1Q99M85 Neat1-201ENSMUST00000173672 20771 ntBASIC3.58□□□□□ -1.84
Scrt1Q99M85 Vmn1r43-203ENSMUST00000226741 12542 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
Scrt1Q99M85 Gm23319-201ENSMUST00000104467 131 ntBASIC3.58□□□□□ -1.84
Scrt1Q99M85 Med21-203ENSMUST00000111650 572 ntTSL 2 BASIC3.58□□□□□ -1.84
Scrt1Q99M85 Sva-202ENSMUST00000117406 645 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
Scrt1Q99M85 Gm11387-201ENSMUST00000120266 772 ntBASIC3.58□□□□□ -1.84
Scrt1Q99M85 Gm11389-201ENSMUST00000121407 430 ntBASIC3.58□□□□□ -1.84
Scrt1Q99M85 Gm13860-201ENSMUST00000125185 452 ntTSL 3 BASIC3.58□□□□□ -1.84
Scrt1Q99M85 Gm23587-201ENSMUST00000157658 84 ntBASIC3.58□□□□□ -1.84
Scrt1Q99M85 Gm25048-201ENSMUST00000158598 91 ntBASIC3.58□□□□□ -1.84
Scrt1Q99M85 Gm10357-201ENSMUST00000159886 264 ntBASIC3.58□□□□□ -1.84
Scrt1Q99M85 Gm17109-201ENSMUST00000163985 358 ntBASIC3.58□□□□□ -1.84
Scrt1Q99M85 Trbv10-201ENSMUST00000168322 289 ntBASIC3.58□□□□□ -1.84
Scrt1Q99M85 Gm37791-201ENSMUST00000195081 286 ntBASIC3.58□□□□□ -1.84
Scrt1Q99M85 Gm34732-201ENSMUST00000195441 445 ntTSL 3 BASIC3.58□□□□□ -1.84
Scrt1Q99M85 Gm8319-201ENSMUST00000205708 641 ntBASIC3.58□□□□□ -1.84
Scrt1Q99M85 Gm30717-201ENSMUST00000206549 494 ntTSL 5 BASIC3.58□□□□□ -1.84
Scrt1Q99M85 Olfr752-ps1-201ENSMUST00000208736 1141 ntBASIC3.58□□□□□ -1.84
Scrt1Q99M85 Gm45551-201ENSMUST00000211459 928 ntBASIC3.58□□□□□ -1.84
Scrt1Q99M85 Gm34983-201ENSMUST00000219484 396 ntTSL 3 BASIC3.58□□□□□ -1.84
Scrt1Q99M85 AC136976.1-201ENSMUST00000221440 381 ntTSL 3 BASIC3.58□□□□□ -1.84
Scrt1Q99M85 Gm46436-201ENSMUST00000221851 1294 ntBASIC3.58□□□□□ -1.84
Scrt1Q99M85 Gm40662-201ENSMUST00000222208 453 ntTSL 5 BASIC3.58□□□□□ -1.84
Scrt1Q99M85 Gm40662-202ENSMUST00000222263 487 ntTSL 5 BASIC3.58□□□□□ -1.84
Scrt1Q99M85 AC156560.3-201ENSMUST00000222978 3841 ntBASIC3.58□□□□□ -1.84
Scrt1Q99M85 Serpinb9d-201ENSMUST00000067198 1250 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Scrt1Q99M85 Vmn1r52-201ENSMUST00000079832 930 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
Scrt1Q99M85 Gm24207-201ENSMUST00000082781 108 ntBASIC3.58□□□□□ -1.84
Scrt1Q99M85 Gm5152-202ENSMUST00000088625 417 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
Scrt1Q99M85 Olfr1090-201ENSMUST00000099875 942 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
Scrt1Q99M85 Gm42942-201ENSMUST00000196086 1328 ntBASIC3.58□□□□□ -1.84
Scrt1Q99M85 Olfr197-202ENSMUST00000207772 1320 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
Scrt1Q99M85 Rd3l-203ENSMUST00000189759 1427 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Scrt1Q99M85 Gm7452-202ENSMUST00000202891 3039 ntBASIC3.58□□□□□ -1.84
Scrt1Q99M85 Gm9972-201ENSMUST00000069051 1533 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
Scrt1Q99M85 Cysltr1-202ENSMUST00000113480 5142 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Scrt1Q99M85 Vmn1r62-201ENSMUST00000173956 1757 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
Scrt1Q99M85 Vmn1r58-201ENSMUST00000108569 10140 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Scrt1Q99M85 Pde1a-206ENSMUST00000102655 4258 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Scrt1Q99M85 Atrx-202ENSMUST00000113573 10275 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
Scrt1Q99M85 Gm44525-201ENSMUST00000183129 2634 ntBASIC3.57□□□□□ -1.84
Scrt1Q99M85 AC158605.2-201ENSMUST00000220287 2726 ntAPPRIS P1 TSL 2 BASIC3.57□□□□□ -1.84
Scrt1Q99M85 AC153964.1-201ENSMUST00000219677 3142 ntBASIC3.57□□□□□ -1.84
Scrt1Q99M85 Neb-202ENSMUST00000036934 22489 ntAPPRIS P2 TSL 5 BASIC3.57□□□□□ -1.84
Scrt1Q99M85 Igkv1-110-201ENSMUST00000103321 401 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
Scrt1Q99M85 Igkv4-69-201ENSMUST00000103349 348 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
Scrt1Q99M85 Kpna2-202ENSMUST00000106768 541 ntTSL 2 BASIC3.57□□□□□ -1.84
Scrt1Q99M85 Gm14299-201ENSMUST00000117586 397 ntBASIC3.57□□□□□ -1.84
Scrt1Q99M85 Gm10241-201ENSMUST00000117664 286 ntBASIC3.57□□□□□ -1.84
Scrt1Q99M85 Gm14621-201ENSMUST00000117709 689 ntBASIC3.57□□□□□ -1.84
Scrt1Q99M85 Gm15313-201ENSMUST00000119179 282 ntBASIC3.57□□□□□ -1.84
Scrt1Q99M85 Gm9043-201ENSMUST00000119677 314 ntBASIC3.57□□□□□ -1.84
Scrt1Q99M85 Gm13170-201ENSMUST00000119716 643 ntBASIC3.57□□□□□ -1.84
Scrt1Q99M85 Gm14605-201ENSMUST00000120599 268 ntBASIC3.57□□□□□ -1.84
Scrt1Q99M85 Gm16471-201ENSMUST00000121940 618 ntBASIC3.57□□□□□ -1.84
Scrt1Q99M85 Gm11965-201ENSMUST00000122017 277 ntBASIC3.57□□□□□ -1.84
Scrt1Q99M85 Gm23084-201ENSMUST00000157850 114 ntBASIC3.57□□□□□ -1.84
Scrt1Q99M85 Gm23773-201ENSMUST00000158985 296 ntBASIC3.57□□□□□ -1.84
Scrt1Q99M85 Gm15508-201ENSMUST00000160330 325 ntBASIC3.57□□□□□ -1.84
Scrt1Q99M85 4930556I23Rik-201ENSMUST00000160659 560 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
Scrt1Q99M85 1700071M16Rik-201ENSMUST00000164150 537 ntTSL 3 BASIC3.57□□□□□ -1.84
Scrt1Q99M85 Gm20405-201ENSMUST00000174002 229 ntTSL 5 BASIC3.57□□□□□ -1.84
Scrt1Q99M85 Vmn2r-ps118-201ENSMUST00000176785 908 ntBASIC3.57□□□□□ -1.84
Scrt1Q99M85 Gm1553-201ENSMUST00000177934 658 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
Scrt1Q99M85 Gm21960-201ENSMUST00000181924 452 ntBASIC3.57□□□□□ -1.84
Scrt1Q99M85 4831440E17Rik-201ENSMUST00000181942 1028 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
Scrt1Q99M85 4930461G14Rik-201ENSMUST00000181967 843 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
Scrt1Q99M85 Mir6996-201ENSMUST00000183922 61 ntBASIC3.57□□□□□ -1.84
Scrt1Q99M85 Gm28688-201ENSMUST00000187301 268 ntBASIC3.57□□□□□ -1.84
Scrt1Q99M85 Mrgprb13-201ENSMUST00000188191 985 ntBASIC3.57□□□□□ -1.84
Scrt1Q99M85 Gm5268-201ENSMUST00000189212 940 ntBASIC3.57□□□□□ -1.84
Scrt1Q99M85 Gm37639-201ENSMUST00000191623 2785 ntBASIC3.57□□□□□ -1.84
Scrt1Q99M85 Gm37853-201ENSMUST00000195748 660 ntTSL 3 BASIC3.57□□□□□ -1.84
Scrt1Q99M85 Mir1892-201ENSMUST00000197752 80 ntBASIC3.57□□□□□ -1.84
Scrt1Q99M85 Gm43730-201ENSMUST00000199863 372 ntBASIC3.57□□□□□ -1.84
Scrt1Q99M85 Gm19987-201ENSMUST00000216339 499 ntBASIC3.57□□□□□ -1.84
Scrt1Q99M85 Olfr1079-203ENSMUST00000216480 2071 ntAPPRIS ALT2 TSL 5 BASIC3.57□□□□□ -1.84
Scrt1Q99M85 Gm35865-201ENSMUST00000220180 287 ntTSL 3 BASIC3.57□□□□□ -1.84
Scrt1Q99M85 Gm18116-201ENSMUST00000220920 537 ntBASIC3.57□□□□□ -1.84
Scrt1Q99M85 Gnrh1-202ENSMUST00000223929 428 ntBASIC3.57□□□□□ -1.84
Retrieved 100 of 76,532 protein–RNA pairs in 86.6 ms