Protein–RNA interactions for Protein: Q99LM2

Cdk5rap3, CDK5 regulatory subunit-associated protein 3, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap3Q99LM2 Smr2-202ENSMUST00000196070 813 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
Cdk5rap3Q99LM2 Gm42516-201ENSMUST00000198691 767 ntBASIC4.23□□□□□ -1.73
Cdk5rap3Q99LM2 Gm43214-201ENSMUST00000199242 352 ntBASIC4.23□□□□□ -1.73
Cdk5rap3Q99LM2 Gm21089-201ENSMUST00000215843 325 ntBASIC4.23□□□□□ -1.73
Cdk5rap3Q99LM2 AC153932.1-201ENSMUST00000218558 787 ntBASIC4.23□□□□□ -1.73
Cdk5rap3Q99LM2 AC124433.2-201ENSMUST00000223867 291 ntBASIC4.23□□□□□ -1.73
Cdk5rap3Q99LM2 Olfr204-201ENSMUST00000072517 918 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
Cdk5rap3Q99LM2 Vmn1r6-201ENSMUST00000079669 1058 ntAPPRIS P2 BASIC4.23□□□□□ -1.73
Cdk5rap3Q99LM2 Adam26a-201ENSMUST00000049577 2489 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
Cdk5rap3Q99LM2 Gm45792-201ENSMUST00000207795 4268 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
Cdk5rap3Q99LM2 Zfp955a-201ENSMUST00000008830 1638 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
Cdk5rap3Q99LM2 Gm42528-201ENSMUST00000200697 3418 ntBASIC4.23□□□□□ -1.73
Cdk5rap3Q99LM2 Gm4788-203ENSMUST00000111989 3187 ntAPPRIS P2 TSL 1 (best) BASIC4.23□□□□□ -1.73
Cdk5rap3Q99LM2 Gm28154-201ENSMUST00000186267 4218 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
Cdk5rap3Q99LM2 4931408C20Rik-201ENSMUST00000097801 4318 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Cdk5rap3Q99LM2 Olfr1180-203ENSMUST00000217320 2107 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
Cdk5rap3Q99LM2 AC167420.1-201ENSMUST00000222999 2121 ntBASIC4.22□□□□□ -1.73
Cdk5rap3Q99LM2 Nlrp4d-201ENSMUST00000182420 2946 ntBASIC4.22□□□□□ -1.73
Cdk5rap3Q99LM2 Zfp638-206ENSMUST00000203324 3822 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
Cdk5rap3Q99LM2 Mmrn1-201ENSMUST00000129603 4477 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
Cdk5rap3Q99LM2 Olfr1101-202ENSMUST00000214411 3235 ntAPPRIS P1 TSL 3 BASIC4.22□□□□□ -1.73
Cdk5rap3Q99LM2 AC142245.1-201ENSMUST00000226611 1505 ntBASIC4.22□□□□□ -1.73
Cdk5rap3Q99LM2 Olfr1150-ps1-201ENSMUST00000121186 3311 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
Cdk5rap3Q99LM2 Vwc2l-203ENSMUST00000161937 4323 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
Cdk5rap3Q99LM2 Gm26387-201ENSMUST00000104238 132 ntBASIC4.22□□□□□ -1.73
Cdk5rap3Q99LM2 Gm15140-201ENSMUST00000112565 984 ntAPPRIS P1 TSL 2 BASIC4.22□□□□□ -1.73
Cdk5rap3Q99LM2 Gm6429-201ENSMUST00000117144 475 ntBASIC4.22□□□□□ -1.73
Cdk5rap3Q99LM2 Gm12982-201ENSMUST00000117408 190 ntBASIC4.22□□□□□ -1.73
Cdk5rap3Q99LM2 Olfr1165-ps-201ENSMUST00000117860 950 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
Cdk5rap3Q99LM2 Gm11698-201ENSMUST00000117948 455 ntBASIC4.22□□□□□ -1.73
Cdk5rap3Q99LM2 Gm5942-201ENSMUST00000120046 439 ntBASIC4.22□□□□□ -1.73
Cdk5rap3Q99LM2 Spin2-ps4-201ENSMUST00000126395 762 ntBASIC4.22□□□□□ -1.73
Cdk5rap3Q99LM2 Gm15274-201ENSMUST00000131442 291 ntBASIC4.22□□□□□ -1.73
Cdk5rap3Q99LM2 Gm21979-201ENSMUST00000139887 291 ntBASIC4.22□□□□□ -1.73
Cdk5rap3Q99LM2 Gm21814-201ENSMUST00000144085 291 ntTSL 5 BASIC4.22□□□□□ -1.73
Cdk5rap3Q99LM2 Gm10057-201ENSMUST00000144098 984 ntAPPRIS P1 TSL 2 BASIC4.22□□□□□ -1.73
Cdk5rap3Q99LM2 Spin2-ps3-201ENSMUST00000148147 762 ntBASIC4.22□□□□□ -1.73
Cdk5rap3Q99LM2 Gm15259-201ENSMUST00000151262 291 ntBASIC4.22□□□□□ -1.73
Cdk5rap3Q99LM2 Vmn1r-ps40-201ENSMUST00000172862 343 ntBASIC4.22□□□□□ -1.73
Cdk5rap3Q99LM2 4921511M17Rik-201ENSMUST00000177994 984 ntAPPRIS P1 TSL 2 BASIC4.22□□□□□ -1.73
Cdk5rap3Q99LM2 Samt1-201ENSMUST00000178342 984 ntAPPRIS P1 TSL 2 BASIC4.22□□□□□ -1.73
Cdk5rap3Q99LM2 Gm7094-201ENSMUST00000178379 366 ntBASIC4.22□□□□□ -1.73
Cdk5rap3Q99LM2 Samt1-202ENSMUST00000178698 834 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
Cdk5rap3Q99LM2 4921511M17Rik-202ENSMUST00000179369 834 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
Cdk5rap3Q99LM2 Snhg14-204ENSMUST00000185890 756 ntTSL 5 BASIC4.22□□□□□ -1.73
Cdk5rap3Q99LM2 Tmem167-ps3-201ENSMUST00000186718 178 ntBASIC4.22□□□□□ -1.73
Cdk5rap3Q99LM2 Scgb2b32-ps-201ENSMUST00000190326 337 ntBASIC4.22□□□□□ -1.73
Cdk5rap3Q99LM2 Gm28902-201ENSMUST00000191531 215 ntTSL 5 BASIC4.22□□□□□ -1.73
Cdk5rap3Q99LM2 Gm9722-201ENSMUST00000194568 802 ntBASIC4.22□□□□□ -1.73
Cdk5rap3Q99LM2 Bc1-ps1-201ENSMUST00000208471 318 ntBASIC4.22□□□□□ -1.73
Cdk5rap3Q99LM2 Gm9373-201ENSMUST00000208724 599 ntBASIC4.22□□□□□ -1.73
Cdk5rap3Q99LM2 Olfr638-201ENSMUST00000209757 966 ntAPPRIS P2 BASIC4.22□□□□□ -1.73
Cdk5rap3Q99LM2 Olfr956-ps1-201ENSMUST00000216492 867 ntBASIC4.22□□□□□ -1.73
Cdk5rap3Q99LM2 AC167202.1-201ENSMUST00000219027 331 ntBASIC4.22□□□□□ -1.73
Cdk5rap3Q99LM2 AC134528.1-201ENSMUST00000219156 387 ntTSL 2 BASIC4.22□□□□□ -1.73
Cdk5rap3Q99LM2 CR974429.1-201ENSMUST00000220877 827 ntBASIC4.22□□□□□ -1.73
Cdk5rap3Q99LM2 AC153662.1-201ENSMUST00000222220 270 ntBASIC4.22□□□□□ -1.73
Cdk5rap3Q99LM2 AC173481.1-201ENSMUST00000223351 270 ntBASIC4.22□□□□□ -1.73
Cdk5rap3Q99LM2 Olfr1484-201ENSMUST00000074180 948 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
Cdk5rap3Q99LM2 Olfr196-201ENSMUST00000077027 930 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
Cdk5rap3Q99LM2 Olfr310-201ENSMUST00000081918 1082 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
Cdk5rap3Q99LM2 Gm4788-202ENSMUST00000111986 2935 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
Cdk5rap3Q99LM2 Olfr1368-202ENSMUST00000216039 1389 ntAPPRIS P1 TSL 3 BASIC4.22□□□□□ -1.73
Cdk5rap3Q99LM2 Dnase2b-201ENSMUST00000029836 2566 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Cdk5rap3Q99LM2 Gm36960-201ENSMUST00000195491 2035 ntBASIC4.22□□□□□ -1.73
Cdk5rap3Q99LM2 Gm45577-201ENSMUST00000210206 2287 ntBASIC4.21□□□□□ -1.73
Cdk5rap3Q99LM2 Vmn2r100-201ENSMUST00000166081 2553 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.73
Cdk5rap3Q99LM2 Olfr729-202ENSMUST00000213163 4283 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
Cdk5rap3Q99LM2 Gm14050-201ENSMUST00000117052 346 ntBASIC4.21□□□□□ -1.74
Cdk5rap3Q99LM2 Gm11488-201ENSMUST00000117277 863 ntBASIC4.21□□□□□ -1.74
Cdk5rap3Q99LM2 Hmgb1-rs18-201ENSMUST00000117940 627 ntBASIC4.21□□□□□ -1.74
Cdk5rap3Q99LM2 Gm11881-201ENSMUST00000119408 572 ntBASIC4.21□□□□□ -1.74
Cdk5rap3Q99LM2 Rps15a-ps4-201ENSMUST00000119415 392 ntBASIC4.21□□□□□ -1.74
Cdk5rap3Q99LM2 Olfr1081-ps1-201ENSMUST00000120210 945 ntBASIC4.21□□□□□ -1.74
Cdk5rap3Q99LM2 Dnajc19-ps-201ENSMUST00000120890 351 ntBASIC4.21□□□□□ -1.74
Cdk5rap3Q99LM2 Gm13868-201ENSMUST00000122411 294 ntBASIC4.21□□□□□ -1.74
Cdk5rap3Q99LM2 Gm3669-203ENSMUST00000133259 677 ntTSL 2 BASIC4.21□□□□□ -1.74
Cdk5rap3Q99LM2 Gm16085-201ENSMUST00000144575 453 ntTSL 3 BASIC4.21□□□□□ -1.74
Cdk5rap3Q99LM2 Gm14974-202ENSMUST00000150003 677 ntTSL 2 BASIC4.21□□□□□ -1.74
Cdk5rap3Q99LM2 Gm2165-204ENSMUST00000153493 677 ntTSL 2 BASIC4.21□□□□□ -1.74
Cdk5rap3Q99LM2 Gm2101-205ENSMUST00000156730 677 ntTSL 2 BASIC4.21□□□□□ -1.74
Cdk5rap3Q99LM2 Ubl5-209ENSMUST00000161882 489 ntTSL 3 BASIC4.21□□□□□ -1.74
Cdk5rap3Q99LM2 Spink14-202ENSMUST00000162265 542 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
Cdk5rap3Q99LM2 Gm17194-201ENSMUST00000164610 348 ntBASIC4.21□□□□□ -1.74
Cdk5rap3Q99LM2 Vmn2r-ps35-201ENSMUST00000169206 831 ntBASIC4.21□□□□□ -1.74
Cdk5rap3Q99LM2 Gm21865-201ENSMUST00000177713 498 ntTSL 5 BASIC4.21□□□□□ -1.74
Cdk5rap3Q99LM2 Gm21960-201ENSMUST00000181924 452 ntBASIC4.21□□□□□ -1.74
Cdk5rap3Q99LM2 Gm29524-201ENSMUST00000190819 699 ntBASIC4.21□□□□□ -1.74
Cdk5rap3Q99LM2 2610044O15Rik8-206ENSMUST00000191043 504 ntTSL 2 BASIC4.21□□□□□ -1.74
Cdk5rap3Q99LM2 Gm37093-201ENSMUST00000192515 407 ntTSL 5 BASIC4.21□□□□□ -1.74
Cdk5rap3Q99LM2 Gm42526-201ENSMUST00000198956 393 ntBASIC4.21□□□□□ -1.74
Cdk5rap3Q99LM2 Gm43478-201ENSMUST00000200381 292 ntBASIC4.21□□□□□ -1.74
Cdk5rap3Q99LM2 Gm43424-201ENSMUST00000200484 253 ntBASIC4.21□□□□□ -1.74
Cdk5rap3Q99LM2 Gm19726-201ENSMUST00000205008 240 ntBASIC4.21□□□□□ -1.74
Cdk5rap3Q99LM2 Gm6112-201ENSMUST00000208037 629 ntBASIC4.21□□□□□ -1.74
Cdk5rap3Q99LM2 Gm45839-201ENSMUST00000209884 399 ntTSL 5 BASIC4.21□□□□□ -1.74
Cdk5rap3Q99LM2 Olfr879-ps1-201ENSMUST00000212455 694 ntBASIC4.21□□□□□ -1.74
Cdk5rap3Q99LM2 AC117240.2-201ENSMUST00000220921 263 ntBASIC4.21□□□□□ -1.74
Cdk5rap3Q99LM2 Selenok-ps6-201ENSMUST00000221812 283 ntBASIC4.21□□□□□ -1.74
Cdk5rap3Q99LM2 Rpl29-ps2-203ENSMUST00000222043 1036 ntTSL 5 BASIC4.21□□□□□ -1.74
Retrieved 100 of 76,532 protein–RNA pairs in 75.9 ms