Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Gm25481-201ENSMUST00000083221 158 ntBASIC3.68□□□□□ -1.82
Lsm1Q8VC85 Gm29674-202ENSMUST00000219664 4083 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
Lsm1Q8VC85 Olfr361-202ENSMUST00000214969 2749 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
Lsm1Q8VC85 Dst-203ENSMUST00000115104 23279 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
Lsm1Q8VC85 Gm37802-201ENSMUST00000194998 2643 ntBASIC3.68□□□□□ -1.82
Lsm1Q8VC85 A830019L24Rik-201ENSMUST00000197226 1652 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
Lsm1Q8VC85 Olfr134-202ENSMUST00000215900 1670 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
Lsm1Q8VC85 Gm5653-201ENSMUST00000223393 1337 ntBASIC3.68□□□□□ -1.82
Lsm1Q8VC85 Ccdc152-202ENSMUST00000226261 1327 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
Lsm1Q8VC85 Mc2r-201ENSMUST00000052347 1562 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
Lsm1Q8VC85 Vmn2r-ps46-201ENSMUST00000172969 2556 ntBASIC3.67□□□□□ -1.82
Lsm1Q8VC85 Gm38375-201ENSMUST00000194610 2227 ntBASIC3.67□□□□□ -1.82
Lsm1Q8VC85 Olfr1042-202ENSMUST00000215624 5096 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
Lsm1Q8VC85 Trdv5-201ENSMUST00000103685 438 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
Lsm1Q8VC85 Gm14621-201ENSMUST00000117709 689 ntBASIC3.67□□□□□ -1.82
Lsm1Q8VC85 Rps15a-ps8-201ENSMUST00000117914 387 ntBASIC3.67□□□□□ -1.82
Lsm1Q8VC85 Gm13155-201ENSMUST00000119277 646 ntBASIC3.67□□□□□ -1.82
Lsm1Q8VC85 Gm12515-201ENSMUST00000120116 361 ntBASIC3.67□□□□□ -1.82
Lsm1Q8VC85 Olfr1118-201ENSMUST00000121296 996 ntAPPRIS P2 BASIC3.67□□□□□ -1.82
Lsm1Q8VC85 Gm8178-201ENSMUST00000121570 646 ntBASIC3.67□□□□□ -1.82
Lsm1Q8VC85 Gm16471-201ENSMUST00000121940 618 ntBASIC3.67□□□□□ -1.82
Lsm1Q8VC85 Gm7846-201ENSMUST00000145844 274 ntBASIC3.67□□□□□ -1.82
Lsm1Q8VC85 Gm23554-201ENSMUST00000157818 110 ntBASIC3.67□□□□□ -1.82
Lsm1Q8VC85 Gm24965-201ENSMUST00000157922 106 ntBASIC3.67□□□□□ -1.82
Lsm1Q8VC85 Gm22637-201ENSMUST00000158144 283 ntBASIC3.67□□□□□ -1.82
Lsm1Q8VC85 Gm20812-201ENSMUST00000179220 684 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
Lsm1Q8VC85 Gm20834-201ENSMUST00000179558 684 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
Lsm1Q8VC85 Otx2os1-201ENSMUST00000183522 866 ntTSL 3 BASIC3.67□□□□□ -1.82
Lsm1Q8VC85 Gm27875-201ENSMUST00000184425 123 ntBASIC3.67□□□□□ -1.82
Lsm1Q8VC85 Gm9775-201ENSMUST00000189402 331 ntBASIC3.67□□□□□ -1.82
Lsm1Q8VC85 Ighv1-21-1-201ENSMUST00000195790 351 ntBASIC3.67□□□□□ -1.82
Lsm1Q8VC85 2510017J16Rik-201ENSMUST00000198718 1263 ntBASIC3.67□□□□□ -1.82
Lsm1Q8VC85 Gm7468-201ENSMUST00000203900 652 ntBASIC3.67□□□□□ -1.82
Lsm1Q8VC85 Gm18672-201ENSMUST00000208035 270 ntBASIC3.67□□□□□ -1.82
Lsm1Q8VC85 Gm44887-201ENSMUST00000208980 178 ntBASIC3.67□□□□□ -1.82
Lsm1Q8VC85 Gm45727-201ENSMUST00000212886 572 ntBASIC3.67□□□□□ -1.82
Lsm1Q8VC85 CAAA01216754.6-201ENSMUST00000217183 398 ntTSL 5 BASIC3.67□□□□□ -1.82
Lsm1Q8VC85 4930520K02Rik-202ENSMUST00000219658 396 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
Lsm1Q8VC85 AC140254.1-201ENSMUST00000220063 331 ntBASIC3.67□□□□□ -1.82
Lsm1Q8VC85 Gm30893-201ENSMUST00000220479 903 ntTSL 5 BASIC3.67□□□□□ -1.82
Lsm1Q8VC85 Gm35615-201ENSMUST00000221255 719 ntTSL 3 BASIC3.67□□□□□ -1.82
Lsm1Q8VC85 AC117656.3-202ENSMUST00000225842 1055 ntBASIC3.67□□□□□ -1.82
Lsm1Q8VC85 CT485608.1-201ENSMUST00000228759 389 ntBASIC3.67□□□□□ -1.82
Lsm1Q8VC85 Gm23443-201ENSMUST00000082916 128 ntBASIC3.67□□□□□ -1.82
Lsm1Q8VC85 Snora70-201ENSMUST00000083047 137 ntBASIC3.67□□□□□ -1.82
Lsm1Q8VC85 Gm23455-201ENSMUST00000083331 100 ntBASIC3.67□□□□□ -1.82
Lsm1Q8VC85 Gm25581-201ENSMUST00000083410 164 ntBASIC3.67□□□□□ -1.82
Lsm1Q8VC85 Vmn1r185-207ENSMUST00000227695 5292 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
Lsm1Q8VC85 Gm6902-202ENSMUST00000191169 1581 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
Lsm1Q8VC85 Gm6176-202ENSMUST00000207633 1581 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
Lsm1Q8VC85 Olfr918-202ENSMUST00000215461 3783 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
Lsm1Q8VC85 Ccr3-201ENSMUST00000039171 3272 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
Lsm1Q8VC85 Olfr801-204ENSMUST00000216067 4014 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
Lsm1Q8VC85 Gm13650-201ENSMUST00000117729 433 ntBASIC3.66□□□□□ -1.82
Lsm1Q8VC85 Gm12994-201ENSMUST00000119601 447 ntBASIC3.66□□□□□ -1.82
Lsm1Q8VC85 Gm12577-201ENSMUST00000119701 574 ntBASIC3.66□□□□□ -1.82
Lsm1Q8VC85 Gm11623-201ENSMUST00000120176 1225 ntBASIC3.66□□□□□ -1.82
Lsm1Q8VC85 Gm14927-201ENSMUST00000120283 454 ntBASIC3.66□□□□□ -1.82
Lsm1Q8VC85 Olfr336-ps1-201ENSMUST00000120897 940 ntBASIC3.66□□□□□ -1.82
Lsm1Q8VC85 Gm11403-201ENSMUST00000122195 369 ntBASIC3.66□□□□□ -1.82
Lsm1Q8VC85 Gm22988-201ENSMUST00000122759 144 ntBASIC3.66□□□□□ -1.82
Lsm1Q8VC85 Gm11337-201ENSMUST00000144770 335 ntTSL 2 BASIC3.66□□□□□ -1.82
Lsm1Q8VC85 Gm23441-201ENSMUST00000157268 127 ntBASIC3.66□□□□□ -1.82
Lsm1Q8VC85 Gm22036-201ENSMUST00000157279 215 ntBASIC3.66□□□□□ -1.82
Lsm1Q8VC85 Gm24850-201ENSMUST00000158029 119 ntBASIC3.66□□□□□ -1.82
Lsm1Q8VC85 Mir3070b-201ENSMUST00000175205 89 ntBASIC3.66□□□□□ -1.82
Lsm1Q8VC85 Gm20701-201ENSMUST00000176082 347 ntBASIC3.66□□□□□ -1.82
Lsm1Q8VC85 Gm28685-201ENSMUST00000187545 1101 ntBASIC3.66□□□□□ -1.82
Lsm1Q8VC85 Scgb2b16-ps-201ENSMUST00000188720 333 ntBASIC3.66□□□□□ -1.82
Lsm1Q8VC85 Gm30280-201ENSMUST00000192214 262 ntBASIC3.66□□□□□ -1.82
Lsm1Q8VC85 Igkv12-47-201ENSMUST00000196961 356 ntBASIC3.66□□□□□ -1.82
Lsm1Q8VC85 Gm43494-201ENSMUST00000197672 388 ntBASIC3.66□□□□□ -1.82
Lsm1Q8VC85 Gm8820-201ENSMUST00000204077 571 ntBASIC3.66□□□□□ -1.82
Lsm1Q8VC85 Klk1b18-ps-201ENSMUST00000205780 167 ntBASIC3.66□□□□□ -1.82
Lsm1Q8VC85 Gm6230-201ENSMUST00000208077 780 ntBASIC3.66□□□□□ -1.82
Lsm1Q8VC85 Gm36247-201ENSMUST00000211834 285 ntBASIC3.66□□□□□ -1.82
Lsm1Q8VC85 AC154368.1-201ENSMUST00000223465 205 ntTSL 5 BASIC3.66□□□□□ -1.82
Lsm1Q8VC85 AC160999.1-201ENSMUST00000225675 810 ntBASIC3.66□□□□□ -1.82
Lsm1Q8VC85 Olfr504-201ENSMUST00000075595 958 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
Lsm1Q8VC85 Vmn1r232-201ENSMUST00000077001 1159 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
Lsm1Q8VC85 n-R5s54-201ENSMUST00000083837 112 ntBASIC3.66□□□□□ -1.82
Lsm1Q8VC85 Zfp616-201ENSMUST00000074813 5014 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
Lsm1Q8VC85 Olfr142-202ENSMUST00000213968 3630 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
Lsm1Q8VC85 Mmrn1-203ENSMUST00000204333 4472 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
Lsm1Q8VC85 Pkhd1l1-202ENSMUST00000166957 12747 ntTSL 5 BASIC3.65□□□□□ -1.82
Lsm1Q8VC85 Pkhd1l1-201ENSMUST00000038336 12741 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
Lsm1Q8VC85 Gm10811-201ENSMUST00000221985 2448 ntBASIC3.65□□□□□ -1.82
Lsm1Q8VC85 Olfr821-202ENSMUST00000205181 1993 ntAPPRIS P1 TSL 2 BASIC3.65□□□□□ -1.82
Lsm1Q8VC85 Olfr1457-203ENSMUST00000214561 1829 ntTSL 5 BASIC3.65□□□□□ -1.82
Lsm1Q8VC85 Gm37655-201ENSMUST00000193968 4123 ntBASIC3.65□□□□□ -1.82
Lsm1Q8VC85 Olfr644-203ENSMUST00000213991 3506 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.82
Lsm1Q8VC85 Mkln1-201ENSMUST00000026699 11395 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
Lsm1Q8VC85 Gm45809-201ENSMUST00000211661 3894 ntBASIC3.65□□□□□ -1.82
Lsm1Q8VC85 Olfr194-203ENSMUST00000216519 3705 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.82
Lsm1Q8VC85 Dst-201ENSMUST00000097785 23251 ntAPPRIS P4 TSL 1 (best) BASIC3.65□□□□□ -1.82
Lsm1Q8VC85 Gm24469-201ENSMUST00000104487 131 ntBASIC3.65□□□□□ -1.83
Lsm1Q8VC85 Prl3c1-202ENSMUST00000110364 850 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.83
Lsm1Q8VC85 Vmn1r-ps108-201ENSMUST00000117059 365 ntBASIC3.65□□□□□ -1.83
Lsm1Q8VC85 Gm11896-201ENSMUST00000121105 820 ntBASIC3.65□□□□□ -1.83
Lsm1Q8VC85 Smt3h2-ps4-201ENSMUST00000121569 288 ntBASIC3.65□□□□□ -1.83
Retrieved 100 of 76,532 protein–RNA pairs in 89.1 ms