Protein–RNA interactions for Protein: Q8R370

Ushbp1, Usher syndrome type-1C protein-binding protein 1, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ushbp1Q8R370 Gm22367-201ENSMUST00000178930 132 ntBASIC5.32□□□□□ -1.56
Ushbp1Q8R370 Gm27564-201ENSMUST00000185196 96 ntBASIC5.32□□□□□ -1.56
Ushbp1Q8R370 Il20-202ENSMUST00000188581 465 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Ushbp1Q8R370 Gm28550-201ENSMUST00000189125 618 ntTSL 5 BASIC5.32□□□□□ -1.56
Ushbp1Q8R370 Gm28460-202ENSMUST00000190590 618 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Ushbp1Q8R370 Gm29130-201ENSMUST00000191015 618 ntTSL 5 BASIC5.32□□□□□ -1.56
Ushbp1Q8R370 Gm8823-201ENSMUST00000193158 433 ntBASIC5.32□□□□□ -1.56
Ushbp1Q8R370 Gm37670-201ENSMUST00000193622 229 ntBASIC5.32□□□□□ -1.56
Ushbp1Q8R370 Gm42539-201ENSMUST00000197009 308 ntBASIC5.32□□□□□ -1.56
Ushbp1Q8R370 Gm3189-201ENSMUST00000205595 832 ntBASIC5.32□□□□□ -1.56
Ushbp1Q8R370 Ankrd42-207ENSMUST00000207131 1220 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Ushbp1Q8R370 Olfr1005-ps1-201ENSMUST00000216207 488 ntBASIC5.32□□□□□ -1.56
Ushbp1Q8R370 Gm18228-201ENSMUST00000217297 1091 ntBASIC5.32□□□□□ -1.56
Ushbp1Q8R370 Olfr790-204ENSMUST00000218901 1070 ntBASIC5.32□□□□□ -1.56
Ushbp1Q8R370 Gm32443-202ENSMUST00000220011 773 ntTSL 5 BASIC5.32□□□□□ -1.56
Ushbp1Q8R370 Gm18026-201ENSMUST00000222789 727 ntBASIC5.32□□□□□ -1.56
Ushbp1Q8R370 AC154329.2-201ENSMUST00000225257 383 ntBASIC5.32□□□□□ -1.56
Ushbp1Q8R370 Olfr790-201ENSMUST00000056002 1070 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
Ushbp1Q8R370 Mrgprb8-201ENSMUST00000056676 1123 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
Ushbp1Q8R370 Olfr782-201ENSMUST00000077024 945 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
Ushbp1Q8R370 Nfyc-202ENSMUST00000097906 1008 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Ushbp1Q8R370 Vmn1r32-202ENSMUST00000227014 2661 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
Ushbp1Q8R370 Egfros-201ENSMUST00000150329 4063 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Ushbp1Q8R370 AC164297.6-201ENSMUST00000224643 1568 ntBASIC5.32□□□□□ -1.56
Ushbp1Q8R370 Olfr360-202ENSMUST00000216706 1816 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Ushbp1Q8R370 AC124586.1-201ENSMUST00000221673 2795 ntBASIC5.32□□□□□ -1.56
Ushbp1Q8R370 Zfp322a-201ENSMUST00000050101 4844 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Ushbp1Q8R370 Apob-202ENSMUST00000037811 13934 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Ushbp1Q8R370 Rapgef4-201ENSMUST00000028525 4109 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Ushbp1Q8R370 Skint9-201ENSMUST00000058605 1372 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Ushbp1Q8R370 Rgs21-202ENSMUST00000184189 1674 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Ushbp1Q8R370 Gcc2-208ENSMUST00000162860 6400 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
Ushbp1Q8R370 AC187103.2-201ENSMUST00000223605 1617 ntBASIC5.31□□□□□ -1.56
Ushbp1Q8R370 Rbm41-203ENSMUST00000113007 3691 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Ushbp1Q8R370 Gm23746-201ENSMUST00000104229 125 ntBASIC5.31□□□□□ -1.56
Ushbp1Q8R370 Tas2r122-201ENSMUST00000105077 930 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
Ushbp1Q8R370 Gm15108-201ENSMUST00000116160 803 ntBASIC5.31□□□□□ -1.56
Ushbp1Q8R370 Gm6429-201ENSMUST00000117144 475 ntBASIC5.31□□□□□ -1.56
Ushbp1Q8R370 Gm12261-201ENSMUST00000117499 645 ntBASIC5.31□□□□□ -1.56
Ushbp1Q8R370 Gm14628-201ENSMUST00000117508 635 ntBASIC5.31□□□□□ -1.56
Ushbp1Q8R370 Gm11913-201ENSMUST00000119094 336 ntBASIC5.31□□□□□ -1.56
Ushbp1Q8R370 Gm13603-201ENSMUST00000119404 83 ntBASIC5.31□□□□□ -1.56
Ushbp1Q8R370 Gm11420-201ENSMUST00000120047 402 ntBASIC5.31□□□□□ -1.56
Ushbp1Q8R370 Gm14506-201ENSMUST00000121165 536 ntBASIC5.31□□□□□ -1.56
Ushbp1Q8R370 1700047A11Rik-202ENSMUST00000153552 622 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Ushbp1Q8R370 5430401F13Rik-202ENSMUST00000161385 608 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Ushbp1Q8R370 Hmgb3-ps-201ENSMUST00000162465 601 ntBASIC5.31□□□□□ -1.56
Ushbp1Q8R370 Gm8161-201ENSMUST00000168739 481 ntBASIC5.31□□□□□ -1.56
Ushbp1Q8R370 Gm17060-201ENSMUST00000172394 824 ntBASIC5.31□□□□□ -1.56
Ushbp1Q8R370 Mir1957b-201ENSMUST00000184608 123 ntBASIC5.31□□□□□ -1.56
Ushbp1Q8R370 Gm27611-201ENSMUST00000184690 108 ntBASIC5.31□□□□□ -1.56
Ushbp1Q8R370 Gm3454-201ENSMUST00000185571 412 ntBASIC5.31□□□□□ -1.56
Ushbp1Q8R370 1700023F02Rik-203ENSMUST00000189619 473 ntTSL 3 BASIC5.31□□□□□ -1.56
Ushbp1Q8R370 Gm10421-203ENSMUST00000190266 781 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Ushbp1Q8R370 1700019A02Rik-202ENSMUST00000190748 726 ntAPPRIS ALT2 TSL 3 BASIC5.31□□□□□ -1.56
Ushbp1Q8R370 Gm28981-201ENSMUST00000190863 1288 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Ushbp1Q8R370 Vmn1r82-202ENSMUST00000191002 918 ntBASIC5.31□□□□□ -1.56
Ushbp1Q8R370 Gm37093-201ENSMUST00000192515 407 ntTSL 5 BASIC5.31□□□□□ -1.56
Ushbp1Q8R370 Gm42990-201ENSMUST00000199231 312 ntBASIC5.31□□□□□ -1.56
Ushbp1Q8R370 Gm42500-201ENSMUST00000199898 517 ntTSL 3 BASIC5.31□□□□□ -1.56
Ushbp1Q8R370 Gm43367-201ENSMUST00000199986 625 ntBASIC5.31□□□□□ -1.56
Ushbp1Q8R370 Rpl26-ps1-201ENSMUST00000213139 426 ntBASIC5.31□□□□□ -1.56
Ushbp1Q8R370 Olfr964-ps1-201ENSMUST00000217577 914 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
Ushbp1Q8R370 AC153568.1-201ENSMUST00000218165 341 ntTSL 2 BASIC5.31□□□□□ -1.56
Ushbp1Q8R370 CT025689.2-201ENSMUST00000224979 429 ntBASIC5.31□□□□□ -1.56
Ushbp1Q8R370 AC121960.3-201ENSMUST00000227077 623 ntBASIC5.31□□□□□ -1.56
Ushbp1Q8R370 Olfr1034-201ENSMUST00000213496 4882 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
Ushbp1Q8R370 Gm37628-201ENSMUST00000194644 5440 ntBASIC5.31□□□□□ -1.56
Ushbp1Q8R370 Vmn1r217-202ENSMUST00000227110 9888 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
Ushbp1Q8R370 AI987944-202ENSMUST00000205338 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
Ushbp1Q8R370 Gpr141-201ENSMUST00000065335 3433 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Ushbp1Q8R370 Zfp989-202ENSMUST00000146688 2295 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Ushbp1Q8R370 Gm21119-201ENSMUST00000178438 2522 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Ushbp1Q8R370 Stxbp4-207ENSMUST00000143203 5985 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Ushbp1Q8R370 Olfr995-202ENSMUST00000216933 1706 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Ushbp1Q8R370 Gm37514-201ENSMUST00000194512 2753 ntBASIC5.31□□□□□ -1.56
Ushbp1Q8R370 Vmn1r171-205ENSMUST00000226771 2718 ntAPPRIS ALT2 BASIC5.31□□□□□ -1.56
Ushbp1Q8R370 Gm43990-201ENSMUST00000203790 1691 ntBASIC5.31□□□□□ -1.56
Ushbp1Q8R370 Grik1-203ENSMUST00000114137 2894 ntTSL 5 BASIC5.3□□□□□ -1.56
Ushbp1Q8R370 Gm37718-201ENSMUST00000191655 2631 ntBASIC5.3□□□□□ -1.56
Ushbp1Q8R370 Gm38104-201ENSMUST00000195121 1895 ntBASIC5.3□□□□□ -1.56
Ushbp1Q8R370 Acer3-201ENSMUST00000033020 11340 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Ushbp1Q8R370 AC165106.3-201ENSMUST00000228191 3843 ntBASIC5.3□□□□□ -1.56
Ushbp1Q8R370 Zfp788-201ENSMUST00000045720 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
Ushbp1Q8R370 AC162938.2-205ENSMUST00000217551 2828 ntBASIC5.3□□□□□ -1.56
Ushbp1Q8R370 Gm38212-201ENSMUST00000194081 2756 ntBASIC5.3□□□□□ -1.56
Ushbp1Q8R370 Zfp287-201ENSMUST00000005399 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
Ushbp1Q8R370 Nxf3-201ENSMUST00000080929 2978 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Ushbp1Q8R370 Mir147-201ENSMUST00000102354 79 ntBASIC5.3□□□□□ -1.56
Ushbp1Q8R370 Klra10-201ENSMUST00000112020 823 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Ushbp1Q8R370 Mir467h-201ENSMUST00000116759 121 ntBASIC5.3□□□□□ -1.56
Ushbp1Q8R370 Gm14706-201ENSMUST00000117744 255 ntBASIC5.3□□□□□ -1.56
Ushbp1Q8R370 Olfr1149-ps1-201ENSMUST00000118232 691 ntBASIC5.3□□□□□ -1.56
Ushbp1Q8R370 Gm11584-201ENSMUST00000120636 325 ntBASIC5.3□□□□□ -1.56
Ushbp1Q8R370 Olfr404-ps1-201ENSMUST00000121065 972 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
Ushbp1Q8R370 Gm12893-201ENSMUST00000121732 275 ntBASIC5.3□□□□□ -1.56
Ushbp1Q8R370 Gm13174-201ENSMUST00000126141 220 ntTSL 3 BASIC5.3□□□□□ -1.56
Ushbp1Q8R370 Gm15338-201ENSMUST00000151884 552 ntTSL 3 BASIC5.3□□□□□ -1.56
Ushbp1Q8R370 Gm13773-201ENSMUST00000156693 583 ntTSL 3 BASIC5.3□□□□□ -1.56
Ushbp1Q8R370 Serpina3l-ps-201ENSMUST00000163975 1264 ntBASIC5.3□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 84.3 ms