Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Gm15737-201ENSMUST00000113434 4894 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Clrn1Q8K445 Lrp1b-208ENSMUST00000167270 10071 ntTSL 5 BASIC4.8□□□□□ -1.64
Clrn1Q8K445 Trim23-202ENSMUST00000069174 4258 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Clrn1Q8K445 Gm18853-201ENSMUST00000183629 3596 ntBASIC4.8□□□□□ -1.64
Clrn1Q8K445 Tcrg-V3-201ENSMUST00000103559 350 ntAPPRIS ALT2 BASIC4.8□□□□□ -1.64
Clrn1Q8K445 Gm11912-201ENSMUST00000117235 264 ntBASIC4.8□□□□□ -1.64
Clrn1Q8K445 Gm16017-201ENSMUST00000119834 208 ntBASIC4.8□□□□□ -1.64
Clrn1Q8K445 Gm12837-201ENSMUST00000120131 373 ntBASIC4.8□□□□□ -1.64
Clrn1Q8K445 Gm14563-201ENSMUST00000120571 354 ntBASIC4.8□□□□□ -1.64
Clrn1Q8K445 Vmn1r-ps116-201ENSMUST00000121544 292 ntBASIC4.8□□□□□ -1.64
Clrn1Q8K445 Gm25150-201ENSMUST00000157121 60 ntBASIC4.8□□□□□ -1.64
Clrn1Q8K445 Gm25966-201ENSMUST00000157169 117 ntBASIC4.8□□□□□ -1.64
Clrn1Q8K445 Gm24860-201ENSMUST00000158457 276 ntBASIC4.8□□□□□ -1.64
Clrn1Q8K445 Gm25907-201ENSMUST00000158486 125 ntBASIC4.8□□□□□ -1.64
Clrn1Q8K445 Gm15657-203ENSMUST00000163077 779 ntTSL 3 BASIC4.8□□□□□ -1.64
Clrn1Q8K445 Rps27-201ENSMUST00000170122 345 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Clrn1Q8K445 Gm8649-201ENSMUST00000181799 233 ntBASIC4.8□□□□□ -1.64
Clrn1Q8K445 AV026068-202ENSMUST00000185793 486 ntTSL 2 BASIC4.8□□□□□ -1.64
Clrn1Q8K445 Gm38011-201ENSMUST00000193312 279 ntBASIC4.8□□□□□ -1.64
Clrn1Q8K445 Gm38316-201ENSMUST00000194838 469 ntTSL 5 BASIC4.8□□□□□ -1.64
Clrn1Q8K445 Gm29813-201ENSMUST00000195856 447 ntBASIC4.8□□□□□ -1.64
Clrn1Q8K445 Igkv2-107-201ENSMUST00000196000 313 ntBASIC4.8□□□□□ -1.64
Clrn1Q8K445 Gm43617-201ENSMUST00000196418 606 ntTSL 2 BASIC4.8□□□□□ -1.64
Clrn1Q8K445 AC166060.1-201ENSMUST00000213509 425 ntTSL 5 BASIC4.8□□□□□ -1.64
Clrn1Q8K445 1700054O05Rik-201ENSMUST00000214107 555 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Clrn1Q8K445 2900078I11Rik-201ENSMUST00000214556 999 ntBASIC4.8□□□□□ -1.64
Clrn1Q8K445 AC123064.1-201ENSMUST00000218950 406 ntBASIC4.8□□□□□ -1.64
Clrn1Q8K445 Gm35558-203ENSMUST00000222264 204 ntBASIC4.8□□□□□ -1.64
Clrn1Q8K445 AV026068-231ENSMUST00000225862 482 ntBASIC4.8□□□□□ -1.64
Clrn1Q8K445 AC164315.1-201ENSMUST00000226452 708 ntBASIC4.8□□□□□ -1.64
Clrn1Q8K445 AC139350.4-201ENSMUST00000228483 798 ntBASIC4.8□□□□□ -1.64
Clrn1Q8K445 1110012L19Rik-201ENSMUST00000053981 1094 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Clrn1Q8K445 Gm9845-201ENSMUST00000056409 598 ntBASIC4.8□□□□□ -1.64
Clrn1Q8K445 Vmn1r49-201ENSMUST00000071865 933 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
Clrn1Q8K445 Olfr1136-201ENSMUST00000077471 1067 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
Clrn1Q8K445 Gm26330-201ENSMUST00000082817 104 ntBASIC4.8□□□□□ -1.64
Clrn1Q8K445 Gm16261-201ENSMUST00000096813 205 ntBASIC4.8□□□□□ -1.64
Clrn1Q8K445 Gm10717-202ENSMUST00000099042 669 ntAPPRIS P5 TSL 5 BASIC4.8□□□□□ -1.64
Clrn1Q8K445 Vmn1r204-202ENSMUST00000228195 2936 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
Clrn1Q8K445 Olfr1173-201ENSMUST00000099830 2268 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Clrn1Q8K445 Vmn1r217-202ENSMUST00000227110 9888 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
Clrn1Q8K445 Slc5a3-201ENSMUST00000113975 10913 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Clrn1Q8K445 4930544M13Rik-202ENSMUST00000181553 1403 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Clrn1Q8K445 Olfr774-202ENSMUST00000203248 1429 ntAPPRIS P1 TSL 3 BASIC4.8□□□□□ -1.64
Clrn1Q8K445 CT009733.2-202ENSMUST00000224171 4748 ntBASIC4.8□□□□□ -1.64
Clrn1Q8K445 B3galt1-202ENSMUST00000112346 4977 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
Clrn1Q8K445 Ifi44-201ENSMUST00000029671 2910 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Clrn1Q8K445 Olfr1261-204ENSMUST00000216953 3176 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Clrn1Q8K445 Far2-202ENSMUST00000111607 3395 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Clrn1Q8K445 Gm16794-201ENSMUST00000180727 2100 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Clrn1Q8K445 Vmn1r35-202ENSMUST00000227346 1854 ntBASIC4.79□□□□□ -1.64
Clrn1Q8K445 Cpa2-201ENSMUST00000096066 1388 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Clrn1Q8K445 Nlrp9b-201ENSMUST00000073151 3346 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Clrn1Q8K445 Gm43209-201ENSMUST00000198949 1588 ntBASIC4.79□□□□□ -1.64
Clrn1Q8K445 Olfr1000-203ENSMUST00000216571 2028 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Clrn1Q8K445 Ank2-207ENSMUST00000182064 12413 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
Clrn1Q8K445 Gm13340-201ENSMUST00000117219 1545 ntBASIC4.79□□□□□ -1.64
Clrn1Q8K445 Elmod1-202ENSMUST00000166580 2243 ntAPPRIS ALT1 TSL 5 BASIC4.79□□□□□ -1.64
Clrn1Q8K445 Serpini1-201ENSMUST00000029423 4091 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Clrn1Q8K445 Gm25088-201ENSMUST00000101803 79 ntBASIC4.79□□□□□ -1.64
Clrn1Q8K445 Gm22273-201ENSMUST00000104040 132 ntBASIC4.79□□□□□ -1.64
Clrn1Q8K445 Cav1-203ENSMUST00000115454 613 ntTSL 2 BASIC4.79□□□□□ -1.64
Clrn1Q8K445 Gm13451-201ENSMUST00000117649 592 ntBASIC4.79□□□□□ -1.64
Clrn1Q8K445 Gm13503-201ENSMUST00000119017 446 ntBASIC4.79□□□□□ -1.64
Clrn1Q8K445 Gm15034-201ENSMUST00000120043 349 ntBASIC4.79□□□□□ -1.64
Clrn1Q8K445 Gm15480-201ENSMUST00000120442 519 ntBASIC4.79□□□□□ -1.64
Clrn1Q8K445 Smt3h2-ps-201ENSMUST00000121084 285 ntBASIC4.79□□□□□ -1.64
Clrn1Q8K445 Gm14678-201ENSMUST00000121396 482 ntBASIC4.79□□□□□ -1.64
Clrn1Q8K445 n-R5s24-201ENSMUST00000122518 117 ntBASIC4.79□□□□□ -1.64
Clrn1Q8K445 Gm24635-201ENSMUST00000122712 128 ntBASIC4.79□□□□□ -1.64
Clrn1Q8K445 Gm15848-202ENSMUST00000125056 832 ntTSL 3 BASIC4.79□□□□□ -1.64
Clrn1Q8K445 Gm16362-201ENSMUST00000135189 214 ntBASIC4.79□□□□□ -1.64
Clrn1Q8K445 Gm16064-201ENSMUST00000154997 464 ntTSL 2 BASIC4.79□□□□□ -1.64
Clrn1Q8K445 Gm23069-201ENSMUST00000158240 311 ntBASIC4.79□□□□□ -1.64
Clrn1Q8K445 Gm17023-201ENSMUST00000165885 448 ntTSL 2 BASIC4.79□□□□□ -1.64
Clrn1Q8K445 Gm28873-201ENSMUST00000186130 667 ntTSL 2 BASIC4.79□□□□□ -1.64
Clrn1Q8K445 Gm29093-201ENSMUST00000187366 409 ntTSL 5 BASIC4.79□□□□□ -1.64
Clrn1Q8K445 Mug-ps1-203ENSMUST00000190643 655 ntTSL 3 BASIC4.79□□□□□ -1.64
Clrn1Q8K445 Gm36984-201ENSMUST00000192770 235 ntBASIC4.79□□□□□ -1.64
Clrn1Q8K445 Gm9134-201ENSMUST00000193186 551 ntBASIC4.79□□□□□ -1.64
Clrn1Q8K445 7420461P10Rik-203ENSMUST00000193898 545 ntAPPRIS ALT2 TSL 3 BASIC4.79□□□□□ -1.64
Clrn1Q8K445 Gm30484-201ENSMUST00000200327 449 ntTSL 5 BASIC4.79□□□□□ -1.64
Clrn1Q8K445 Gm19649-201ENSMUST00000201126 822 ntBASIC4.79□□□□□ -1.64
Clrn1Q8K445 Gm43262-201ENSMUST00000202970 1219 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Clrn1Q8K445 Gm43919-201ENSMUST00000204303 364 ntBASIC4.79□□□□□ -1.64
Clrn1Q8K445 Gm45081-201ENSMUST00000206281 572 ntBASIC4.79□□□□□ -1.64
Clrn1Q8K445 A530021J07Rik-203ENSMUST00000208111 308 ntTSL 2 BASIC4.79□□□□□ -1.64
Clrn1Q8K445 Gm45590-201ENSMUST00000209715 262 ntBASIC4.79□□□□□ -1.64
Clrn1Q8K445 Gm45615-201ENSMUST00000210417 656 ntTSL 3 BASIC4.79□□□□□ -1.64
Clrn1Q8K445 Gm29785-201ENSMUST00000217033 383 ntBASIC4.79□□□□□ -1.64
Clrn1Q8K445 AC166358.9-201ENSMUST00000220653 375 ntBASIC4.79□□□□□ -1.64
Clrn1Q8K445 Gm40271-201ENSMUST00000221752 422 ntTSL 3 BASIC4.79□□□□□ -1.64
Clrn1Q8K445 AC166369.1-201ENSMUST00000228126 351 ntBASIC4.79□□□□□ -1.64
Clrn1Q8K445 AC154738.4-201ENSMUST00000228310 414 ntBASIC4.79□□□□□ -1.64
Clrn1Q8K445 Clec2j-201ENSMUST00000032517 515 ntBASIC4.79□□□□□ -1.64
Clrn1Q8K445 Gm7099-201ENSMUST00000080066 554 ntBASIC4.79□□□□□ -1.64
Clrn1Q8K445 Gm26206-201ENSMUST00000082908 110 ntBASIC4.79□□□□□ -1.64
Clrn1Q8K445 Gm24610-201ENSMUST00000083270 109 ntBASIC4.79□□□□□ -1.64
Clrn1Q8K445 Vmn1r27-203ENSMUST00000228530 3115 ntAPPRIS P2 BASIC4.79□□□□□ -1.64
Clrn1Q8K445 AC155922.2-201ENSMUST00000220240 1458 ntTSL 5 BASIC4.79□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 71.5 ms