Protein–RNA interactions for Protein: Q8CIE6

Copa, Coatomer subunit alpha, mousemouse

Known RBP Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopaQ8CIE6 Scgb2b28-ps-201ENSMUST00000188974 337 ntBASIC4.77□□□□□ -1.65
CopaQ8CIE6 Gm10421-203ENSMUST00000190266 781 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CopaQ8CIE6 Gm28724-202ENSMUST00000194218 295 ntBASIC4.77□□□□□ -1.65
CopaQ8CIE6 Gm36017-201ENSMUST00000199005 923 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CopaQ8CIE6 Gm44757-201ENSMUST00000206373 157 ntBASIC4.77□□□□□ -1.65
CopaQ8CIE6 Gm44733-201ENSMUST00000208067 543 ntTSL 3 BASIC4.77□□□□□ -1.65
CopaQ8CIE6 AC158686.2-201ENSMUST00000218599 976 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CopaQ8CIE6 AC152951.1-201ENSMUST00000218907 266 ntBASIC4.77□□□□□ -1.65
CopaQ8CIE6 AC141642.1-201ENSMUST00000220598 229 ntBASIC4.77□□□□□ -1.65
CopaQ8CIE6 AC120383.1-201ENSMUST00000221123 573 ntTSL 3 BASIC4.77□□□□□ -1.65
CopaQ8CIE6 AC123705.4-201ENSMUST00000222411 493 ntTSL 3 BASIC4.77□□□□□ -1.65
CopaQ8CIE6 AC154335.2-201ENSMUST00000225916 638 ntBASIC4.77□□□□□ -1.65
CopaQ8CIE6 CT573086.3-201ENSMUST00000228762 594 ntBASIC4.77□□□□□ -1.65
CopaQ8CIE6 Gngt1-201ENSMUST00000031673 1183 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CopaQ8CIE6 Ifnk-201ENSMUST00000058595 805 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CopaQ8CIE6 Olfr741-201ENSMUST00000071932 936 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
CopaQ8CIE6 Olfr715b-201ENSMUST00000081044 948 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
CopaQ8CIE6 Gm24166-201ENSMUST00000082724 135 ntBASIC4.77□□□□□ -1.65
CopaQ8CIE6 Gm42704-201ENSMUST00000196875 1778 ntBASIC4.77□□□□□ -1.65
CopaQ8CIE6 Gm2912-201ENSMUST00000223472 1799 ntTSL 5 BASIC4.77□□□□□ -1.65
CopaQ8CIE6 Gm42729-201ENSMUST00000201770 2930 ntBASIC4.77□□□□□ -1.65
CopaQ8CIE6 Ccnb3-202ENSMUST00000115752 4554 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CopaQ8CIE6 Zfp640-202ENSMUST00000224116 1562 ntBASIC4.77□□□□□ -1.65
CopaQ8CIE6 Zfp287-201ENSMUST00000005399 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
CopaQ8CIE6 Olfr1312-203ENSMUST00000213961 5345 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
CopaQ8CIE6 AC123858.1-201ENSMUST00000226948 1874 ntBASIC4.77□□□□□ -1.65
CopaQ8CIE6 Gm38278-201ENSMUST00000194715 1365 ntBASIC4.77□□□□□ -1.65
CopaQ8CIE6 Gm37115-201ENSMUST00000193750 2849 ntBASIC4.77□□□□□ -1.65
CopaQ8CIE6 Rgs21-202ENSMUST00000184189 1674 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
CopaQ8CIE6 Vmn1r58-201ENSMUST00000108569 10140 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CopaQ8CIE6 Gm42559-201ENSMUST00000201811 3532 ntBASIC4.76□□□□□ -1.65
CopaQ8CIE6 Gm42842-201ENSMUST00000197736 3004 ntBASIC4.76□□□□□ -1.65
CopaQ8CIE6 Egfros-201ENSMUST00000150329 4063 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CopaQ8CIE6 Gm12393-201ENSMUST00000117084 848 ntBASIC4.76□□□□□ -1.65
CopaQ8CIE6 Olfr1327-ps1-201ENSMUST00000117953 835 ntBASIC4.76□□□□□ -1.65
CopaQ8CIE6 Gm13867-201ENSMUST00000120844 395 ntBASIC4.76□□□□□ -1.65
CopaQ8CIE6 Gm11891-201ENSMUST00000121241 619 ntBASIC4.76□□□□□ -1.65
CopaQ8CIE6 Gm13330-201ENSMUST00000136400 388 ntTSL 5 BASIC4.76□□□□□ -1.65
CopaQ8CIE6 Gm15340-201ENSMUST00000144984 704 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CopaQ8CIE6 4930548K13Rik-201ENSMUST00000154459 561 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CopaQ8CIE6 Gm14549-201ENSMUST00000154993 1035 ntTSL 5 BASIC4.76□□□□□ -1.65
CopaQ8CIE6 Gm23960-201ENSMUST00000157206 131 ntBASIC4.76□□□□□ -1.65
CopaQ8CIE6 Gm24113-201ENSMUST00000157477 276 ntBASIC4.76□□□□□ -1.65
CopaQ8CIE6 Gm9017-201ENSMUST00000159613 676 ntTSL 2 BASIC4.76□□□□□ -1.65
CopaQ8CIE6 Vmn1r-ps65-201ENSMUST00000174235 951 ntBASIC4.76□□□□□ -1.65
CopaQ8CIE6 1700031A10Rik-201ENSMUST00000174380 656 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CopaQ8CIE6 Gm16378-201ENSMUST00000179168 342 ntBASIC4.76□□□□□ -1.65
CopaQ8CIE6 Gm26828-201ENSMUST00000180640 172 ntBASIC4.76□□□□□ -1.65
CopaQ8CIE6 Mir6344-201ENSMUST00000183462 104 ntBASIC4.76□□□□□ -1.65
CopaQ8CIE6 Gm27875-201ENSMUST00000184425 123 ntBASIC4.76□□□□□ -1.65
CopaQ8CIE6 Gm20822-202ENSMUST00000188422 1229 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CopaQ8CIE6 Gm28116-201ENSMUST00000189064 387 ntBASIC4.76□□□□□ -1.65
CopaQ8CIE6 Gm20828-202ENSMUST00000190516 1229 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CopaQ8CIE6 Gm37243-201ENSMUST00000193407 595 ntBASIC4.76□□□□□ -1.65
CopaQ8CIE6 Gm37088-201ENSMUST00000193887 406 ntBASIC4.76□□□□□ -1.65
CopaQ8CIE6 Gm18382-201ENSMUST00000194394 582 ntBASIC4.76□□□□□ -1.65
CopaQ8CIE6 Gm43304-201ENSMUST00000196803 326 ntBASIC4.76□□□□□ -1.65
CopaQ8CIE6 Gm43440-201ENSMUST00000201957 729 ntBASIC4.76□□□□□ -1.65
CopaQ8CIE6 Gm44059-201ENSMUST00000204048 351 ntBASIC4.76□□□□□ -1.65
CopaQ8CIE6 Gm44879-201ENSMUST00000207007 503 ntBASIC4.76□□□□□ -1.65
CopaQ8CIE6 Gm30676-201ENSMUST00000214000 1165 ntTSL 5 BASIC4.76□□□□□ -1.65
CopaQ8CIE6 AC153957.1-201ENSMUST00000215235 229 ntBASIC4.76□□□□□ -1.65
CopaQ8CIE6 Slfn5os-202ENSMUST00000216469 550 ntTSL 5 BASIC4.76□□□□□ -1.65
CopaQ8CIE6 AC159629.1-201ENSMUST00000220698 568 ntTSL 2 BASIC4.76□□□□□ -1.65
CopaQ8CIE6 AC113031.2-201ENSMUST00000226132 579 ntBASIC4.76□□□□□ -1.65
CopaQ8CIE6 AC126690.1-201ENSMUST00000228898 397 ntBASIC4.76□□□□□ -1.65
CopaQ8CIE6 Ccl5-201ENSMUST00000035938 532 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CopaQ8CIE6 Mrgprb8-201ENSMUST00000056676 1123 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
CopaQ8CIE6 Olfr103-201ENSMUST00000058826 942 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
CopaQ8CIE6 Olfr970-201ENSMUST00000071132 936 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
CopaQ8CIE6 Gm10436-201ENSMUST00000071580 1883 ntAPPRIS P2 TSL 1 (best) BASIC4.76□□□□□ -1.65
CopaQ8CIE6 Olfr969-201ENSMUST00000074566 936 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
CopaQ8CIE6 Gm25404-201ENSMUST00000082970 107 ntBASIC4.76□□□□□ -1.65
CopaQ8CIE6 Defb26-201ENSMUST00000099205 561 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CopaQ8CIE6 Olfr1195-201ENSMUST00000099818 927 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
CopaQ8CIE6 Olfr1185-ps1-201ENSMUST00000075025 3344 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
CopaQ8CIE6 Gm42946-201ENSMUST00000196108 2570 ntBASIC4.76□□□□□ -1.65
CopaQ8CIE6 Gnrhr-203ENSMUST00000113372 2265 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CopaQ8CIE6 Olfr134-202ENSMUST00000215900 1670 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
CopaQ8CIE6 Gm13340-201ENSMUST00000117219 1545 ntBASIC4.76□□□□□ -1.65
CopaQ8CIE6 Dnah3-201ENSMUST00000046993 12252 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
CopaQ8CIE6 Prkdc-201ENSMUST00000023352 12647 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CopaQ8CIE6 Olfr612-203ENSMUST00000215663 2473 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
CopaQ8CIE6 Fbxw28-201ENSMUST00000112039 1497 ntAPPRIS P4 TSL 1 (best) BASIC4.75□□□□□ -1.65
CopaQ8CIE6 Olfr875-202ENSMUST00000215128 2039 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
CopaQ8CIE6 Fam111a-201ENSMUST00000025595 3267 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
CopaQ8CIE6 Hnrnpr-207ENSMUST00000148843 21452 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CopaQ8CIE6 Arpp19-203ENSMUST00000166549 1747 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CopaQ8CIE6 AC126439.1-201ENSMUST00000226772 2104 ntBASIC4.75□□□□□ -1.65
CopaQ8CIE6 Olfr291-202ENSMUST00000217039 3471 ntAPPRIS ALT2 TSL 2 BASIC4.75□□□□□ -1.65
CopaQ8CIE6 Fsd1l-207ENSMUST00000180164 7340 ntAPPRIS ALT1 TSL 5 BASIC4.75□□□□□ -1.65
CopaQ8CIE6 Kif20b-201ENSMUST00000087341 5564 ntAPPRIS P2 TSL 5 BASIC4.75□□□□□ -1.65
CopaQ8CIE6 Mir208b-201ENSMUST00000104735 77 ntBASIC4.75□□□□□ -1.65
CopaQ8CIE6 Mir190b-201ENSMUST00000104803 80 ntBASIC4.75□□□□□ -1.65
CopaQ8CIE6 Gm17132-201ENSMUST00000109542 1158 ntBASIC4.75□□□□□ -1.65
CopaQ8CIE6 Gm11633-201ENSMUST00000118176 444 ntBASIC4.75□□□□□ -1.65
CopaQ8CIE6 Gm13501-201ENSMUST00000118477 979 ntBASIC4.75□□□□□ -1.65
CopaQ8CIE6 Gm14417-201ENSMUST00000120036 1074 ntBASIC4.75□□□□□ -1.65
CopaQ8CIE6 Gm13745-201ENSMUST00000121994 527 ntBASIC4.75□□□□□ -1.65
CopaQ8CIE6 Gm12909-201ENSMUST00000134190 620 ntTSL 2 BASIC4.75□□□□□ -1.65
Retrieved 100 of 76,532 protein–RNA pairs in 62.6 ms