Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Fastkd1-201ENSMUST00000073152 2865 ntAPPRIS P2 TSL 1 (best) BASIC6.31□□□□□ -1.4
Trim47Q8C0E3 Dnah2-201ENSMUST00000035539 13569 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
Trim47Q8C0E3 Toporsl-202ENSMUST00000107671 2699 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Trim47Q8C0E3 Gm43682-201ENSMUST00000202150 2090 ntBASIC6.31□□□□□ -1.4
Trim47Q8C0E3 Gm37930-201ENSMUST00000194308 1886 ntBASIC6.31□□□□□ -1.4
Trim47Q8C0E3 Grin2b-201ENSMUST00000053880 24060 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
Trim47Q8C0E3 Rpl36a-201ENSMUST00000113211 483 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Trim47Q8C0E3 Gm11908-201ENSMUST00000117755 347 ntBASIC6.31□□□□□ -1.4
Trim47Q8C0E3 Gm5381-201ENSMUST00000117975 1250 ntBASIC6.31□□□□□ -1.4
Trim47Q8C0E3 Gm12768-201ENSMUST00000120055 759 ntBASIC6.31□□□□□ -1.4
Trim47Q8C0E3 Gm12023-201ENSMUST00000145182 520 ntTSL 5 BASIC6.31□□□□□ -1.4
Trim47Q8C0E3 Gm11466-201ENSMUST00000148017 291 ntTSL 3 BASIC6.31□□□□□ -1.4
Trim47Q8C0E3 Mup-ps11-201ENSMUST00000178040 545 ntBASIC6.31□□□□□ -1.4
Trim47Q8C0E3 Mup-ps3-201ENSMUST00000178315 545 ntBASIC6.31□□□□□ -1.4
Trim47Q8C0E3 Ighv6-5-201ENSMUST00000179796 297 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
Trim47Q8C0E3 Rpl23a-ps8-201ENSMUST00000186144 463 ntBASIC6.31□□□□□ -1.4
Trim47Q8C0E3 Gm9480-201ENSMUST00000198038 616 ntBASIC6.31□□□□□ -1.4
Trim47Q8C0E3 Gm44011-201ENSMUST00000203336 394 ntBASIC6.31□□□□□ -1.4
Trim47Q8C0E3 Gm44002-201ENSMUST00000205134 594 ntBASIC6.31□□□□□ -1.4
Trim47Q8C0E3 Gm7675-201ENSMUST00000208828 686 ntBASIC6.31□□□□□ -1.4
Trim47Q8C0E3 Gm45455-202ENSMUST00000211156 630 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Trim47Q8C0E3 Gm45910-201ENSMUST00000212493 1003 ntBASIC6.31□□□□□ -1.4
Trim47Q8C0E3 Gm18488-201ENSMUST00000215082 364 ntBASIC6.31□□□□□ -1.4
Trim47Q8C0E3 CT033781.1-201ENSMUST00000223128 454 ntTSL 5 BASIC6.31□□□□□ -1.4
Trim47Q8C0E3 AC117656.1-201ENSMUST00000225826 339 ntBASIC6.31□□□□□ -1.4
Trim47Q8C0E3 Spink7-201ENSMUST00000076194 258 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
Trim47Q8C0E3 Magea6-201ENSMUST00000076986 1201 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Trim47Q8C0E3 Olfr99-201ENSMUST00000077585 918 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
Trim47Q8C0E3 Gm25202-201ENSMUST00000082838 191 ntBASIC6.31□□□□□ -1.4
Trim47Q8C0E3 Mir7-2-201ENSMUST00000083675 97 ntBASIC6.31□□□□□ -1.4
Trim47Q8C0E3 Olfr1348-201ENSMUST00000086319 957 ntTSL 5 BASIC6.31□□□□□ -1.4
Trim47Q8C0E3 Xlr5b-201ENSMUST00000097221 864 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
Trim47Q8C0E3 Gm14886-201ENSMUST00000117208 2629 ntBASIC6.31□□□□□ -1.4
Trim47Q8C0E3 Zfp708-201ENSMUST00000109742 2416 ntAPPRIS P2 TSL 1 (best) BASIC6.31□□□□□ -1.4
Trim47Q8C0E3 Zfp708-203ENSMUST00000190566 2406 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Trim47Q8C0E3 Wdr17-206ENSMUST00000144711 4720 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
Trim47Q8C0E3 Gm3259-202ENSMUST00000160045 1847 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
Trim47Q8C0E3 Nxf2-201ENSMUST00000010085 2393 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
Trim47Q8C0E3 Rabgap1-203ENSMUST00000112920 4847 ntAPPRIS P4 TSL 5 BASIC6.31□□□□□ -1.4
Trim47Q8C0E3 Usp26-202ENSMUST00000114869 4133 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Trim47Q8C0E3 Usp26-201ENSMUST00000069509 4120 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Trim47Q8C0E3 Vmn1r39-201ENSMUST00000226217 2258 ntAPPRIS P2 BASIC6.3□□□□□ -1.4
Trim47Q8C0E3 Vmn1r39-204ENSMUST00000227555 2297 ntAPPRIS P2 BASIC6.3□□□□□ -1.4
Trim47Q8C0E3 Vmn1r39-205ENSMUST00000228008 2283 ntAPPRIS ALT2 BASIC6.3□□□□□ -1.4
Trim47Q8C0E3 Zfp106-211ENSMUST00000171215 6391 ntTSL 5 BASIC6.3□□□□□ -1.4
Trim47Q8C0E3 Rspry1-205ENSMUST00000211983 3397 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Trim47Q8C0E3 Olfr9-201ENSMUST00000091996 2672 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
Trim47Q8C0E3 Mir208b-201ENSMUST00000104735 77 ntBASIC6.3□□□□□ -1.4
Trim47Q8C0E3 Gm15402-201ENSMUST00000114051 670 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Trim47Q8C0E3 Gm14220-201ENSMUST00000118114 449 ntBASIC6.3□□□□□ -1.4
Trim47Q8C0E3 Gm14838-201ENSMUST00000118913 248 ntBASIC6.3□□□□□ -1.4
Trim47Q8C0E3 Gm12806-201ENSMUST00000119384 268 ntBASIC6.3□□□□□ -1.4
Trim47Q8C0E3 Gm7079-201ENSMUST00000119726 171 ntBASIC6.3□□□□□ -1.4
Trim47Q8C0E3 Gm26412-201ENSMUST00000157666 55 ntBASIC6.3□□□□□ -1.4
Trim47Q8C0E3 Gm23779-201ENSMUST00000157938 64 ntBASIC6.3□□□□□ -1.4
Trim47Q8C0E3 AC122858.3-202ENSMUST00000161721 433 ntTSL 5 BASIC6.3□□□□□ -1.4
Trim47Q8C0E3 Hspe1-ps3-201ENSMUST00000172726 277 ntBASIC6.3□□□□□ -1.4
Trim47Q8C0E3 Gm5935-202ENSMUST00000178986 639 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
Trim47Q8C0E3 Gm23966-201ENSMUST00000179823 107 ntBASIC6.3□□□□□ -1.4
Trim47Q8C0E3 Gm17435-201ENSMUST00000181452 2994 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Trim47Q8C0E3 1110046J04Rik-203ENSMUST00000181800 777 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Trim47Q8C0E3 Rps12-ps24-201ENSMUST00000182321 381 ntBASIC6.3□□□□□ -1.4
Trim47Q8C0E3 Gm27976-201ENSMUST00000183635 162 ntBASIC6.3□□□□□ -1.4
Trim47Q8C0E3 Gm28781-201ENSMUST00000185760 696 ntBASIC6.3□□□□□ -1.4
Trim47Q8C0E3 Gm29307-201ENSMUST00000187367 696 ntBASIC6.3□□□□□ -1.4
Trim47Q8C0E3 Gm28883-201ENSMUST00000189256 369 ntBASIC6.3□□□□□ -1.4
Trim47Q8C0E3 Gm29339-201ENSMUST00000189613 696 ntBASIC6.3□□□□□ -1.4
Trim47Q8C0E3 Gm29407-201ENSMUST00000191468 696 ntBASIC6.3□□□□□ -1.4
Trim47Q8C0E3 Gm37202-201ENSMUST00000193679 361 ntTSL 3 BASIC6.3□□□□□ -1.4
Trim47Q8C0E3 4930500F04Rik-202ENSMUST00000202156 251 ntTSL 3 BASIC6.3□□□□□ -1.4
Trim47Q8C0E3 Gm45173-201ENSMUST00000206819 305 ntBASIC6.3□□□□□ -1.4
Trim47Q8C0E3 Olfr499-ps1-201ENSMUST00000208811 930 ntBASIC6.3□□□□□ -1.4
Trim47Q8C0E3 Gm45678-201ENSMUST00000210509 295 ntBASIC6.3□□□□□ -1.4
Trim47Q8C0E3 AC135019.1-201ENSMUST00000219949 307 ntBASIC6.3□□□□□ -1.4
Trim47Q8C0E3 AC153646.2-201ENSMUST00000220516 109 ntBASIC6.3□□□□□ -1.4
Trim47Q8C0E3 AC122924.2-201ENSMUST00000220799 298 ntBASIC6.3□□□□□ -1.4
Trim47Q8C0E3 AC125543.4-201ENSMUST00000223385 117 ntBASIC6.3□□□□□ -1.4
Trim47Q8C0E3 CT025157.1-201ENSMUST00000226241 292 ntBASIC6.3□□□□□ -1.4
Trim47Q8C0E3 AC120553.1-201ENSMUST00000227313 260 ntBASIC6.3□□□□□ -1.4
Trim47Q8C0E3 AC123665.4-201ENSMUST00000228790 249 ntBASIC6.3□□□□□ -1.4
Trim47Q8C0E3 Defb11-201ENSMUST00000051965 317 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Trim47Q8C0E3 Defa34-201ENSMUST00000075268 375 ntAPPRIS P1 TSL 2 BASIC6.3□□□□□ -1.4
Trim47Q8C0E3 Defa5-201ENSMUST00000098892 376 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Trim47Q8C0E3 Gm813-201ENSMUST00000099663 702 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Trim47Q8C0E3 Prdm9-206ENSMUST00000167994 3460 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Trim47Q8C0E3 Zfp9-201ENSMUST00000161170 3968 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Trim47Q8C0E3 Gm21955-201ENSMUST00000194137 4968 ntBASIC6.3□□□□□ -1.4
Trim47Q8C0E3 Gm38128-201ENSMUST00000192085 3250 ntBASIC6.3□□□□□ -1.4
Trim47Q8C0E3 Zfp11-201ENSMUST00000049778 3929 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Trim47Q8C0E3 Gm44026-201ENSMUST00000203985 2088 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Trim47Q8C0E3 AC131586.2-202ENSMUST00000227016 2705 ntBASIC6.3□□□□□ -1.4
Trim47Q8C0E3 Nlrp5-201ENSMUST00000015866 3508 ntAPPRIS P4 TSL 1 (best) BASIC6.3□□□□□ -1.4
Trim47Q8C0E3 Olfr497-202ENSMUST00000213521 2396 ntAPPRIS P1 TSL 3 BASIC6.3□□□□□ -1.4
Trim47Q8C0E3 Sox6-204ENSMUST00000166877 8079 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
Trim47Q8C0E3 Gm43490-201ENSMUST00000197593 2652 ntBASIC6.3□□□□□ -1.4
Trim47Q8C0E3 Trim12a-201ENSMUST00000070943 1531 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Trim47Q8C0E3 Dnm3os-201ENSMUST00000139662 7928 ntBASIC6.3□□□□□ -1.4
Trim47Q8C0E3 Gm10324-201ENSMUST00000092528 1815 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
Trim47Q8C0E3 3110067C02Rik-201ENSMUST00000120793 2117 ntBASIC6.29□□□□□ -1.4
Trim47Q8C0E3 Olfr107-204ENSMUST00000215974 2282 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 62.9 ms