Protein–RNA interactions for Protein: Q80VI1

Trim56, E3 ubiquitin-protein ligase TRIM56, mousemouse

Known RBP Predictions only

Length 734 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56Q80VI1 Gm22046-201ENSMUST00000179027 94 ntBASIC6□□□□□ -1.45
Trim56Q80VI1 Snord116l10-201ENSMUST00000179053 94 ntBASIC6□□□□□ -1.45
Trim56Q80VI1 Gm24153-201ENSMUST00000179280 94 ntBASIC6□□□□□ -1.45
Trim56Q80VI1 Gm25597-201ENSMUST00000179388 94 ntBASIC6□□□□□ -1.45
Trim56Q80VI1 Snord116l1-201ENSMUST00000179518 94 ntBASIC6□□□□□ -1.45
Trim56Q80VI1 Gm22941-201ENSMUST00000179630 94 ntBASIC6□□□□□ -1.45
Trim56Q80VI1 Gm22631-201ENSMUST00000179656 94 ntBASIC6□□□□□ -1.45
Trim56Q80VI1 Gm25816-201ENSMUST00000179764 94 ntBASIC6□□□□□ -1.45
Trim56Q80VI1 Snord116l14-201ENSMUST00000179875 94 ntBASIC6□□□□□ -1.45
Trim56Q80VI1 Snord116l8-201ENSMUST00000179889 94 ntBASIC6□□□□□ -1.45
Trim56Q80VI1 Snord116l7-201ENSMUST00000179895 94 ntBASIC6□□□□□ -1.45
Trim56Q80VI1 Snord116l5-201ENSMUST00000179927 94 ntBASIC6□□□□□ -1.45
Trim56Q80VI1 Gm2759-201ENSMUST00000179938 639 ntBASIC6□□□□□ -1.45
Trim56Q80VI1 Snord116l6-201ENSMUST00000179955 94 ntBASIC6□□□□□ -1.45
Trim56Q80VI1 Gm26188-201ENSMUST00000179963 94 ntBASIC6□□□□□ -1.45
Trim56Q80VI1 Gm25471-201ENSMUST00000180126 94 ntBASIC6□□□□□ -1.45
Trim56Q80VI1 Gm26433-201ENSMUST00000180227 94 ntBASIC6□□□□□ -1.45
Trim56Q80VI1 Snord116l11-201ENSMUST00000180312 94 ntBASIC6□□□□□ -1.45
Trim56Q80VI1 Gm23862-201ENSMUST00000180342 94 ntBASIC6□□□□□ -1.45
Trim56Q80VI1 Gm22128-201ENSMUST00000180346 94 ntBASIC6□□□□□ -1.45
Trim56Q80VI1 Lockd-204ENSMUST00000184991 243 ntTSL 5 BASIC6□□□□□ -1.45
Trim56Q80VI1 Gm18802-201ENSMUST00000186270 888 ntBASIC6□□□□□ -1.45
Trim56Q80VI1 Gm28141-201ENSMUST00000186676 342 ntBASIC6□□□□□ -1.45
Trim56Q80VI1 Gm28097-201ENSMUST00000187333 366 ntBASIC6□□□□□ -1.45
Trim56Q80VI1 Gm28974-201ENSMUST00000187893 231 ntBASIC6□□□□□ -1.45
Trim56Q80VI1 Gm18177-201ENSMUST00000188373 404 ntBASIC6□□□□□ -1.45
Trim56Q80VI1 Gm43617-201ENSMUST00000196418 606 ntTSL 2 BASIC6□□□□□ -1.45
Trim56Q80VI1 Gm33962-202ENSMUST00000205195 630 ntTSL 5 BASIC6□□□□□ -1.45
Trim56Q80VI1 Gm45048-201ENSMUST00000207058 429 ntBASIC6□□□□□ -1.45
Trim56Q80VI1 Olfr496-ps1-201ENSMUST00000208862 915 ntBASIC6□□□□□ -1.45
Trim56Q80VI1 Gm19140-201ENSMUST00000209790 421 ntBASIC6□□□□□ -1.45
Trim56Q80VI1 Gm35262-201ENSMUST00000215133 267 ntBASIC6□□□□□ -1.45
Trim56Q80VI1 Fam228b-208ENSMUST00000219898 288 ntAPPRIS ALT2 TSL 3 BASIC6□□□□□ -1.45
Trim56Q80VI1 CT030242.3-201ENSMUST00000221231 581 ntBASIC6□□□□□ -1.45
Trim56Q80VI1 AL606513.1-201ENSMUST00000225369 579 ntBASIC6□□□□□ -1.45
Trim56Q80VI1 AC163646.2-201ENSMUST00000227962 141 ntBASIC6□□□□□ -1.45
Trim56Q80VI1 2900092C05Rik-201ENSMUST00000032541 887 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Trim56Q80VI1 Gm25699-201ENSMUST00000082896 167 ntBASIC6□□□□□ -1.45
Trim56Q80VI1 Mir342-201ENSMUST00000083502 99 ntBASIC6□□□□□ -1.45
Trim56Q80VI1 Stau2-213ENSMUST00000159558 3901 ntTSL 5 BASIC6□□□□□ -1.45
Trim56Q80VI1 Zfp934-203ENSMUST00000220648 2439 ntTSL 5 BASIC6□□□□□ -1.45
Trim56Q80VI1 Gm10352-201ENSMUST00000166474 1482 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
Trim56Q80VI1 Tmem67-201ENSMUST00000050686 3456 ntAPPRIS P2 TSL 1 (best) BASIC6□□□□□ -1.45
Trim56Q80VI1 Aadacl2-201ENSMUST00000169794 1590 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Trim56Q80VI1 Gm7709-201ENSMUST00000199391 1858 ntBASIC6□□□□□ -1.45
Trim56Q80VI1 Olfr104-ps-201ENSMUST00000178766 1972 ntAPPRIS ALT2 TSL 5 BASIC6□□□□□ -1.45
Trim56Q80VI1 Gm44847-201ENSMUST00000207104 1991 ntBASIC6□□□□□ -1.45
Trim56Q80VI1 Vmn2r-ps128-201ENSMUST00000176367 2570 ntBASIC6□□□□□ -1.45
Trim56Q80VI1 3222401L13Rik-202ENSMUST00000192137 6292 ntBASIC6□□□□□ -1.45
Trim56Q80VI1 Cyp2c50-201ENSMUST00000068094 1643 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Trim56Q80VI1 Gm37767-201ENSMUST00000193239 1834 ntBASIC5.99□□□□□ -1.45
Trim56Q80VI1 Gm14399-204ENSMUST00000109060 1911 ntAPPRIS P1 TSL 3 BASIC5.99□□□□□ -1.45
Trim56Q80VI1 Olfr198-202ENSMUST00000208244 2200 ntAPPRIS P1 TSL 2 BASIC5.99□□□□□ -1.45
Trim56Q80VI1 Gm34639-201ENSMUST00000222648 2241 ntTSL 5 BASIC5.99□□□□□ -1.45
Trim56Q80VI1 9830107B12Rik-201ENSMUST00000063481 3639 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Trim56Q80VI1 Olfr890-202ENSMUST00000213458 5475 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
Trim56Q80VI1 Vmn1r175-202ENSMUST00000228383 2878 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
Trim56Q80VI1 Igkv10-94-201ENSMUST00000103330 347 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
Trim56Q80VI1 Gm14221-201ENSMUST00000109473 340 ntTSL 3 BASIC5.99□□□□□ -1.45
Trim56Q80VI1 Gm4758-201ENSMUST00000114851 291 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
Trim56Q80VI1 Gm14512-201ENSMUST00000117924 230 ntBASIC5.99□□□□□ -1.45
Trim56Q80VI1 Gm15772-201ENSMUST00000118533 438 ntBASIC5.99□□□□□ -1.45
Trim56Q80VI1 Gm22960-201ENSMUST00000122517 104 ntBASIC5.99□□□□□ -1.45
Trim56Q80VI1 Gm23118-201ENSMUST00000122657 187 ntBASIC5.99□□□□□ -1.45
Trim56Q80VI1 2210408F21Rik-203ENSMUST00000133510 429 ntTSL 3 BASIC5.99□□□□□ -1.45
Trim56Q80VI1 Gm2020-201ENSMUST00000145242 579 ntBASIC5.99□□□□□ -1.45
Trim56Q80VI1 Gm12114-201ENSMUST00000147896 656 ntTSL 3 BASIC5.99□□□□□ -1.45
Trim56Q80VI1 Gm24289-201ENSMUST00000157629 135 ntBASIC5.99□□□□□ -1.45
Trim56Q80VI1 Gm22534-201ENSMUST00000158173 104 ntBASIC5.99□□□□□ -1.45
Trim56Q80VI1 Gm3182-202ENSMUST00000169364 997 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
Trim56Q80VI1 Vmn2r-ps6-201ENSMUST00000176317 1101 ntBASIC5.99□□□□□ -1.45
Trim56Q80VI1 Gm26335-201ENSMUST00000178449 107 ntBASIC5.99□□□□□ -1.45
Trim56Q80VI1 Gm8906-202ENSMUST00000179375 465 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
Trim56Q80VI1 Gm24306-201ENSMUST00000180229 79 ntBASIC5.99□□□□□ -1.45
Trim56Q80VI1 Gm27660-201ENSMUST00000184028 208 ntBASIC5.99□□□□□ -1.45
Trim56Q80VI1 Gm28146-201ENSMUST00000185517 701 ntBASIC5.99□□□□□ -1.45
Trim56Q80VI1 Gm28574-201ENSMUST00000185757 699 ntBASIC5.99□□□□□ -1.45
Trim56Q80VI1 Gm29093-201ENSMUST00000187366 409 ntTSL 5 BASIC5.99□□□□□ -1.45
Trim56Q80VI1 Gm28397-201ENSMUST00000187970 699 ntBASIC5.99□□□□□ -1.45
Trim56Q80VI1 Gm29366-201ENSMUST00000190481 699 ntBASIC5.99□□□□□ -1.45
Trim56Q80VI1 Gm38046-201ENSMUST00000192733 550 ntBASIC5.99□□□□□ -1.45
Trim56Q80VI1 Ighv3-7-201ENSMUST00000193370 348 ntBASIC5.99□□□□□ -1.45
Trim56Q80VI1 4930447N08Rik-201ENSMUST00000196290 497 ntTSL 3 BASIC5.99□□□□□ -1.45
Trim56Q80VI1 Gm44125-201ENSMUST00000203068 448 ntBASIC5.99□□□□□ -1.45
Trim56Q80VI1 Klra13-ps-204ENSMUST00000205252 640 ntTSL 3 BASIC5.99□□□□□ -1.45
Trim56Q80VI1 Gm44820-201ENSMUST00000207420 396 ntBASIC5.99□□□□□ -1.45
Trim56Q80VI1 Gm7786-201ENSMUST00000210494 436 ntBASIC5.99□□□□□ -1.45
Trim56Q80VI1 AC154452.1-201ENSMUST00000225819 241 ntBASIC5.99□□□□□ -1.45
Trim56Q80VI1 AC102291.2-201ENSMUST00000228083 367 ntBASIC5.99□□□□□ -1.45
Trim56Q80VI1 Cst9-201ENSMUST00000028935 687 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Trim56Q80VI1 Fhl5-201ENSMUST00000029922 1106 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Trim56Q80VI1 Gm5215-201ENSMUST00000054380 405 ntBASIC5.99□□□□□ -1.45
Trim56Q80VI1 Olfr857-201ENSMUST00000077023 930 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
Trim56Q80VI1 Snord15b-201ENSMUST00000083032 145 ntBASIC5.99□□□□□ -1.45
Trim56Q80VI1 Olfr51-202ENSMUST00000213415 2819 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
Trim56Q80VI1 Gm35842-201ENSMUST00000207859 4464 ntTSL 5 BASIC5.99□□□□□ -1.45
Trim56Q80VI1 Olfr767-202ENSMUST00000213579 5493 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
Trim56Q80VI1 Scn2a-201ENSMUST00000028377 8935 ntAPPRIS P3 TSL 5 BASIC5.99□□□□□ -1.45
Trim56Q80VI1 Mme-205ENSMUST00000194134 8039 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Trim56Q80VI1 Mef2c-202ENSMUST00000163888 6277 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
Retrieved 100 of 76,532 protein–RNA pairs in 90.5 ms