Protein–RNA interactions for Protein: Q78JW9

Ubfd1, Ubiquitin domain-containing protein UBFD1, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1Q78JW9 Gm45063-201ENSMUST00000203726 472 ntBASIC4.58□□□□□ -1.68
Ubfd1Q78JW9 4930503L19Rik-202ENSMUST00000211817 913 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
Ubfd1Q78JW9 AC160635.2-201ENSMUST00000216368 734 ntTSL 5 BASIC4.58□□□□□ -1.68
Ubfd1Q78JW9 AC161256.1-201ENSMUST00000217312 213 ntBASIC4.58□□□□□ -1.68
Ubfd1Q78JW9 Gm34609-201ENSMUST00000219284 789 ntTSL 5 BASIC4.58□□□□□ -1.68
Ubfd1Q78JW9 AC153924.1-201ENSMUST00000220117 312 ntBASIC4.58□□□□□ -1.68
Ubfd1Q78JW9 AC099578.1-201ENSMUST00000220147 435 ntBASIC4.58□□□□□ -1.68
Ubfd1Q78JW9 4930442G10Rik-202ENSMUST00000221968 1096 ntTSL 5 BASIC4.58□□□□□ -1.68
Ubfd1Q78JW9 AC158521.1-201ENSMUST00000225295 660 ntBASIC4.58□□□□□ -1.68
Ubfd1Q78JW9 AC154598.1-201ENSMUST00000227079 347 ntBASIC4.58□□□□□ -1.68
Ubfd1Q78JW9 Rpl21-ps4-201ENSMUST00000080237 438 ntBASIC4.58□□□□□ -1.68
Ubfd1Q78JW9 Gm43166-201ENSMUST00000202871 4379 ntTSL 5 BASIC4.58□□□□□ -1.68
Ubfd1Q78JW9 5330434G04Rik-202ENSMUST00000136406 3545 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
Ubfd1Q78JW9 Gm5141-201ENSMUST00000167516 1743 ntTSL 5 BASIC4.58□□□□□ -1.68
Ubfd1Q78JW9 Xirp2-201ENSMUST00000028410 11955 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Ubfd1Q78JW9 Oxr1-202ENSMUST00000090095 4156 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
Ubfd1Q78JW9 Rnf213-202ENSMUST00000131035 16716 ntAPPRIS P5 TSL 5 BASIC4.57□□□□□ -1.68
Ubfd1Q78JW9 4921515E04Rik-203ENSMUST00000227364 2309 ntBASIC4.57□□□□□ -1.68
Ubfd1Q78JW9 Trim30a-201ENSMUST00000076922 3771 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Ubfd1Q78JW9 Vmn2r-ps42-201ENSMUST00000174123 2083 ntBASIC4.57□□□□□ -1.68
Ubfd1Q78JW9 AC124426.1-203ENSMUST00000221814 1362 ntBASIC4.57□□□□□ -1.68
Ubfd1Q78JW9 Hsfy2-201ENSMUST00000062085 1392 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
Ubfd1Q78JW9 Gm43654-201ENSMUST00000200664 3417 ntBASIC4.57□□□□□ -1.68
Ubfd1Q78JW9 Gm5653-201ENSMUST00000223393 1337 ntBASIC4.57□□□□□ -1.68
Ubfd1Q78JW9 Ptgs2-201ENSMUST00000035065 4453 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Ubfd1Q78JW9 Gm23014-201ENSMUST00000104144 130 ntBASIC4.57□□□□□ -1.68
Ubfd1Q78JW9 Rps15a-ps8-201ENSMUST00000117914 387 ntBASIC4.57□□□□□ -1.68
Ubfd1Q78JW9 Rpl23a-ps14-201ENSMUST00000118777 424 ntBASIC4.57□□□□□ -1.68
Ubfd1Q78JW9 Gm16017-201ENSMUST00000119834 208 ntBASIC4.57□□□□□ -1.68
Ubfd1Q78JW9 Gm15120-201ENSMUST00000120602 301 ntBASIC4.57□□□□□ -1.68
Ubfd1Q78JW9 Gm12358-201ENSMUST00000121842 520 ntBASIC4.57□□□□□ -1.68
Ubfd1Q78JW9 Gm23885-201ENSMUST00000122682 294 ntBASIC4.57□□□□□ -1.68
Ubfd1Q78JW9 Gm25290-201ENSMUST00000122796 144 ntBASIC4.57□□□□□ -1.68
Ubfd1Q78JW9 Gm27192-201ENSMUST00000136428 581 ntTSL 3 BASIC4.57□□□□□ -1.68
Ubfd1Q78JW9 Zakit-201ENSMUST00000157677 308 ntBASIC4.57□□□□□ -1.68
Ubfd1Q78JW9 Ighv5-8-201ENSMUST00000166255 278 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
Ubfd1Q78JW9 Gm18128-201ENSMUST00000172625 511 ntBASIC4.57□□□□□ -1.68
Ubfd1Q78JW9 Mir6393-201ENSMUST00000183709 94 ntBASIC4.57□□□□□ -1.68
Ubfd1Q78JW9 Gm29550-201ENSMUST00000185543 285 ntBASIC4.57□□□□□ -1.68
Ubfd1Q78JW9 Gm4557-201ENSMUST00000185826 907 ntBASIC4.57□□□□□ -1.68
Ubfd1Q78JW9 Gm4526-201ENSMUST00000186039 920 ntBASIC4.57□□□□□ -1.68
Ubfd1Q78JW9 Tmem167-ps3-201ENSMUST00000186718 178 ntBASIC4.57□□□□□ -1.68
Ubfd1Q78JW9 Skint2-204ENSMUST00000186969 1258 ntAPPRIS P2 TSL 1 (best) BASIC4.57□□□□□ -1.68
Ubfd1Q78JW9 Gm29193-201ENSMUST00000187129 830 ntTSL 3 BASIC4.57□□□□□ -1.68
Ubfd1Q78JW9 Gm8708-201ENSMUST00000188500 906 ntBASIC4.57□□□□□ -1.68
Ubfd1Q78JW9 Gm3145-201ENSMUST00000188584 220 ntBASIC4.57□□□□□ -1.68
Ubfd1Q78JW9 4930548G14Rik-202ENSMUST00000190364 1185 ntTSL 2 BASIC4.57□□□□□ -1.68
Ubfd1Q78JW9 Gm37972-201ENSMUST00000193497 379 ntTSL 5 BASIC4.57□□□□□ -1.68
Ubfd1Q78JW9 Gm37670-201ENSMUST00000193622 229 ntBASIC4.57□□□□□ -1.68
Ubfd1Q78JW9 Gm37209-201ENSMUST00000194109 1276 ntBASIC4.57□□□□□ -1.68
Ubfd1Q78JW9 Gm38221-201ENSMUST00000195146 365 ntBASIC4.57□□□□□ -1.68
Ubfd1Q78JW9 Gm43601-201ENSMUST00000196294 945 ntBASIC4.57□□□□□ -1.68
Ubfd1Q78JW9 Gm43828-201ENSMUST00000196890 639 ntBASIC4.57□□□□□ -1.68
Ubfd1Q78JW9 Gm42982-201ENSMUST00000198574 687 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
Ubfd1Q78JW9 Gm43301-201ENSMUST00000198918 778 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
Ubfd1Q78JW9 Gm43428-201ENSMUST00000200108 3845 ntBASIC4.57□□□□□ -1.68
Ubfd1Q78JW9 Olfr778-ps1-201ENSMUST00000204517 207 ntBASIC4.57□□□□□ -1.68
Ubfd1Q78JW9 Olfr795-ps1-201ENSMUST00000205245 763 ntBASIC4.57□□□□□ -1.68
Ubfd1Q78JW9 Olfr192-202ENSMUST00000205727 1141 ntAPPRIS P1 TSL 2 BASIC4.57□□□□□ -1.68
Ubfd1Q78JW9 Gm5373-201ENSMUST00000212113 1050 ntBASIC4.57□□□□□ -1.68
Ubfd1Q78JW9 Gm45727-201ENSMUST00000212886 572 ntBASIC4.57□□□□□ -1.68
Ubfd1Q78JW9 Gm46327-201ENSMUST00000218240 365 ntBASIC4.57□□□□□ -1.68
Ubfd1Q78JW9 CT010480.1-201ENSMUST00000223612 363 ntBASIC4.57□□□□□ -1.68
Ubfd1Q78JW9 AC135377.1-201ENSMUST00000223692 463 ntBASIC4.57□□□□□ -1.68
Ubfd1Q78JW9 AC154270.1-201ENSMUST00000227226 426 ntBASIC4.57□□□□□ -1.68
Ubfd1Q78JW9 Olfr808-201ENSMUST00000060636 939 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
Ubfd1Q78JW9 Olfr25-201ENSMUST00000071449 1068 ntAPPRIS P2 BASIC4.57□□□□□ -1.68
Ubfd1Q78JW9 Olfr1459-202ENSMUST00000213493 8854 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
Ubfd1Q78JW9 Olfr985-202ENSMUST00000214981 1879 ntAPPRIS P1 TSL 3 BASIC4.57□□□□□ -1.68
Ubfd1Q78JW9 4930430A15Rik-201ENSMUST00000028577 1840 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Ubfd1Q78JW9 Gm37916-201ENSMUST00000192153 2435 ntBASIC4.57□□□□□ -1.68
Ubfd1Q78JW9 Spink5-201ENSMUST00000069245 4785 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Ubfd1Q78JW9 Gm18913-201ENSMUST00000204311 1789 ntBASIC4.57□□□□□ -1.68
Ubfd1Q78JW9 Cnot6l-202ENSMUST00000113005 3170 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
Ubfd1Q78JW9 Cyp7a1-201ENSMUST00000029905 4172 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Ubfd1Q78JW9 Gm19335-201ENSMUST00000195836 2069 ntBASIC4.57□□□□□ -1.68
Ubfd1Q78JW9 Gm42843-201ENSMUST00000196328 3616 ntBASIC4.57□□□□□ -1.68
Ubfd1Q78JW9 Nxf3-201ENSMUST00000080929 2978 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
Ubfd1Q78JW9 Gm6367-201ENSMUST00000178646 2464 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
Ubfd1Q78JW9 AC113059.3-201ENSMUST00000217423 2777 ntBASIC4.56□□□□□ -1.68
Ubfd1Q78JW9 Cfhr1-201ENSMUST00000023965 1793 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
Ubfd1Q78JW9 Gm15624-203ENSMUST00000204811 3402 ntBASIC4.56□□□□□ -1.68
Ubfd1Q78JW9 Olfr741-202ENSMUST00000205518 3406 ntAPPRIS P1 TSL 2 BASIC4.56□□□□□ -1.68
Ubfd1Q78JW9 Gm22591-201ENSMUST00000104243 106 ntBASIC4.56□□□□□ -1.68
Ubfd1Q78JW9 Gm23709-201ENSMUST00000104364 130 ntBASIC4.56□□□□□ -1.68
Ubfd1Q78JW9 Gm22498-201ENSMUST00000104497 86 ntBASIC4.56□□□□□ -1.68
Ubfd1Q78JW9 Mir879-201ENSMUST00000104703 76 ntBASIC4.56□□□□□ -1.68
Ubfd1Q78JW9 Gm25773-201ENSMUST00000116718 127 ntBASIC4.56□□□□□ -1.68
Ubfd1Q78JW9 Gm13321-201ENSMUST00000117101 400 ntBASIC4.56□□□□□ -1.68
Ubfd1Q78JW9 Gm12697-201ENSMUST00000118008 667 ntBASIC4.56□□□□□ -1.68
Ubfd1Q78JW9 Snrpert-201ENSMUST00000121967 279 ntBASIC4.56□□□□□ -1.68
Ubfd1Q78JW9 Gm15241-201ENSMUST00000125700 474 ntTSL 3 BASIC4.56□□□□□ -1.68
Ubfd1Q78JW9 Gm15218-201ENSMUST00000131006 618 ntTSL 5 BASIC4.56□□□□□ -1.68
Ubfd1Q78JW9 1700061F12Rik-201ENSMUST00000132414 876 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
Ubfd1Q78JW9 Gm25874-201ENSMUST00000178030 79 ntBASIC4.56□□□□□ -1.68
Ubfd1Q78JW9 Gm23269-201ENSMUST00000178701 107 ntBASIC4.56□□□□□ -1.68
Ubfd1Q78JW9 Gm27564-201ENSMUST00000185196 96 ntBASIC4.56□□□□□ -1.68
Ubfd1Q78JW9 Gm29031-201ENSMUST00000185316 614 ntBASIC4.56□□□□□ -1.68
Ubfd1Q78JW9 Gm29000-201ENSMUST00000185444 614 ntBASIC4.56□□□□□ -1.68
Ubfd1Q78JW9 Gm28204-201ENSMUST00000185934 614 ntBASIC4.56□□□□□ -1.68
Retrieved 100 of 76,532 protein–RNA pairs in 62.5 ms