Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Trav14n-2-201ENSMUST00000103623 276 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
Nup98Q6PFD9 Gm8289-201ENSMUST00000144814 1182 ntBASIC4.05□□□□□ -1.76
Nup98Q6PFD9 Gm18604-201ENSMUST00000172535 558 ntBASIC4.05□□□□□ -1.76
Nup98Q6PFD9 Trav14-2-202ENSMUST00000184874 276 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
Nup98Q6PFD9 Ms4a4a-201ENSMUST00000188995 836 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
Nup98Q6PFD9 Gm43217-201ENSMUST00000199513 367 ntBASIC4.05□□□□□ -1.76
Nup98Q6PFD9 4930428D20Rik-201ENSMUST00000201886 546 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
Nup98Q6PFD9 AC167250.1-201ENSMUST00000213739 3813 ntBASIC4.05□□□□□ -1.76
Nup98Q6PFD9 Sprr2h-201ENSMUST00000059845 752 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
Nup98Q6PFD9 Vmn1r231-201ENSMUST00000061278 936 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
Nup98Q6PFD9 Tas2r136-201ENSMUST00000065532 984 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
Nup98Q6PFD9 Gm24950-201ENSMUST00000082768 191 ntBASIC4.05□□□□□ -1.76
Nup98Q6PFD9 Gm23971-201ENSMUST00000083317 191 ntBASIC4.05□□□□□ -1.76
Nup98Q6PFD9 Gm23849-201ENSMUST00000083833 191 ntBASIC4.05□□□□□ -1.76
Nup98Q6PFD9 Gm26316-201ENSMUST00000083886 191 ntBASIC4.05□□□□□ -1.76
Nup98Q6PFD9 Rnu2-10-201ENSMUST00000084010 191 ntBASIC4.05□□□□□ -1.76
Nup98Q6PFD9 Gm19301-201ENSMUST00000174283 2210 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
Nup98Q6PFD9 Mbnl1-219ENSMUST00000194201 4319 ntTSL 5 BASIC4.05□□□□□ -1.76
Nup98Q6PFD9 Gm42675-201ENSMUST00000197552 4035 ntBASIC4.05□□□□□ -1.76
Nup98Q6PFD9 Gm18609-201ENSMUST00000203370 3601 ntBASIC4.05□□□□□ -1.76
Nup98Q6PFD9 Zfp990-201ENSMUST00000105741 3044 ntAPPRIS P1 TSL 3 BASIC4.05□□□□□ -1.76
Nup98Q6PFD9 AC154368.2-201ENSMUST00000222334 1724 ntBASIC4.05□□□□□ -1.76
Nup98Q6PFD9 Olfr502-202ENSMUST00000216919 3282 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
Nup98Q6PFD9 9330159F19Rik-201ENSMUST00000092627 5681 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
Nup98Q6PFD9 Olfr986-203ENSMUST00000216720 3381 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
Nup98Q6PFD9 Trav8n-2-201ENSMUST00000103632 408 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
Nup98Q6PFD9 Gm11408-201ENSMUST00000117889 519 ntBASIC4.05□□□□□ -1.76
Nup98Q6PFD9 Gm11708-201ENSMUST00000119530 832 ntBASIC4.05□□□□□ -1.76
Nup98Q6PFD9 Tshb-202ENSMUST00000170856 552 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
Nup98Q6PFD9 Gm28358-202ENSMUST00000189292 223 ntBASIC4.05□□□□□ -1.76
Nup98Q6PFD9 Gm18387-201ENSMUST00000220333 702 ntBASIC4.05□□□□□ -1.76
Nup98Q6PFD9 AC154515.2-201ENSMUST00000226093 406 ntBASIC4.05□□□□□ -1.76
Nup98Q6PFD9 Vmn1r43-201ENSMUST00000089418 1069 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
Nup98Q6PFD9 Olfr112-201ENSMUST00000085548 3103 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
Nup98Q6PFD9 Trhr-202ENSMUST00000110289 1745 ntAPPRIS P1 TSL 2 BASIC4.04□□□□□ -1.76
Nup98Q6PFD9 Nlrp9a-202ENSMUST00000108387 3336 ntAPPRIS P4 TSL 1 (best) BASIC4.04□□□□□ -1.76
Nup98Q6PFD9 Gm42547-201ENSMUST00000201159 3798 ntBASIC4.04□□□□□ -1.76
Nup98Q6PFD9 Olfr111-202ENSMUST00000214259 2620 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
Nup98Q6PFD9 Olfr1162-202ENSMUST00000183862 4800 ntAPPRIS P1 TSL 2 BASIC4.04□□□□□ -1.76
Nup98Q6PFD9 Acsl4-204ENSMUST00000112907 5137 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
Nup98Q6PFD9 Erbb4-201ENSMUST00000119142 11782 ntAPPRIS ALT1 TSL 5 BASIC4.04□□□□□ -1.76
Nup98Q6PFD9 Gpr34-201ENSMUST00000041708 2088 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
Nup98Q6PFD9 5330434G04Rik-203ENSMUST00000142109 3449 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
Nup98Q6PFD9 Cacnb4-202ENSMUST00000102760 7872 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
Nup98Q6PFD9 Gm11488-201ENSMUST00000117277 863 ntBASIC4.04□□□□□ -1.76
Nup98Q6PFD9 Gm12118-201ENSMUST00000119766 532 ntBASIC4.04□□□□□ -1.76
Nup98Q6PFD9 Sox5it-201ENSMUST00000144026 1207 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
Nup98Q6PFD9 9530034E10Rik-201ENSMUST00000146982 502 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
Nup98Q6PFD9 Gm26733-201ENSMUST00000180846 2046 ntTSL 5 BASIC4.04□□□□□ -1.76
Nup98Q6PFD9 Gm21960-201ENSMUST00000181924 452 ntBASIC4.04□□□□□ -1.76
Nup98Q6PFD9 Gm37288-201ENSMUST00000193963 334 ntBASIC4.04□□□□□ -1.76
Nup98Q6PFD9 Gm19030-201ENSMUST00000194947 552 ntBASIC4.04□□□□□ -1.76
Nup98Q6PFD9 Gm9379-201ENSMUST00000196790 646 ntBASIC4.04□□□□□ -1.76
Nup98Q6PFD9 Olfr1498-ps1-201ENSMUST00000208721 991 ntBASIC4.04□□□□□ -1.76
Nup98Q6PFD9 Gm44594-201ENSMUST00000208982 407 ntBASIC4.04□□□□□ -1.76
Nup98Q6PFD9 AC173482.3-201ENSMUST00000225492 1212 ntBASIC4.04□□□□□ -1.76
Nup98Q6PFD9 Gm9845-201ENSMUST00000056409 598 ntBASIC4.04□□□□□ -1.76
Nup98Q6PFD9 Cysltr1-202ENSMUST00000113480 5142 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
Nup98Q6PFD9 Olfr1211-203ENSMUST00000213412 4173 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
Nup98Q6PFD9 Slc22a30-201ENSMUST00000064507 1888 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
Nup98Q6PFD9 Smim9-201ENSMUST00000101433 706 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
Nup98Q6PFD9 Ap3s1-ps1-201ENSMUST00000117113 579 ntBASIC4.03□□□□□ -1.76
Nup98Q6PFD9 Rps11-ps5-201ENSMUST00000117302 472 ntBASIC4.03□□□□□ -1.76
Nup98Q6PFD9 Gm17732-201ENSMUST00000163259 821 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
Nup98Q6PFD9 Ap3s1-ps2-201ENSMUST00000178107 579 ntBASIC4.03□□□□□ -1.76
Nup98Q6PFD9 Gm27374-201ENSMUST00000183660 81 ntBASIC4.03□□□□□ -1.76
Nup98Q6PFD9 Mir6398-201ENSMUST00000184541 102 ntBASIC4.03□□□□□ -1.76
Nup98Q6PFD9 Igkv9-128-201ENSMUST00000196602 353 ntBASIC4.03□□□□□ -1.76
Nup98Q6PFD9 Gm42919-201ENSMUST00000197753 1284 ntBASIC4.03□□□□□ -1.76
Nup98Q6PFD9 4930513D17Rik-203ENSMUST00000202800 1159 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
Nup98Q6PFD9 Gm44964-201ENSMUST00000207011 273 ntBASIC4.03□□□□□ -1.76
Nup98Q6PFD9 Gm8681-201ENSMUST00000219115 618 ntBASIC4.03□□□□□ -1.76
Nup98Q6PFD9 AC153370.1-201ENSMUST00000220296 635 ntTSL 5 BASIC4.03□□□□□ -1.76
Nup98Q6PFD9 Creg1-201ENSMUST00000040298 425 ntTSL 3 BASIC4.03□□□□□ -1.76
Nup98Q6PFD9 Vmn1r89-201ENSMUST00000053008 951 ntAPPRIS P2 BASIC4.03□□□□□ -1.76
Nup98Q6PFD9 Olfr606-201ENSMUST00000098200 960 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
Nup98Q6PFD9 Smcp-201ENSMUST00000098888 861 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
Nup98Q6PFD9 Gm44283-201ENSMUST00000204461 3950 ntBASIC4.03□□□□□ -1.76
Nup98Q6PFD9 Gm38699-201ENSMUST00000221301 1740 ntBASIC4.03□□□□□ -1.76
Nup98Q6PFD9 Clhc1-204ENSMUST00000208530 2062 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
Nup98Q6PFD9 Olfr577-202ENSMUST00000214080 3282 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.77
Nup98Q6PFD9 Zfp965-201ENSMUST00000109002 957 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
Nup98Q6PFD9 Gm13803-201ENSMUST00000117547 489 ntBASIC4.02□□□□□ -1.77
Nup98Q6PFD9 Olfr406-201ENSMUST00000133561 1101 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
Nup98Q6PFD9 Gm25438-201ENSMUST00000158281 110 ntBASIC4.02□□□□□ -1.77
Nup98Q6PFD9 Gm20688-201ENSMUST00000176779 512 ntTSL 5 BASIC4.02□□□□□ -1.77
Nup98Q6PFD9 Gm42468-201ENSMUST00000200360 703 ntTSL 3 BASIC4.02□□□□□ -1.77
Nup98Q6PFD9 Gm8106-201ENSMUST00000213123 523 ntBASIC4.02□□□□□ -1.77
Nup98Q6PFD9 Vmn1r26-201ENSMUST00000049694 1020 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
Nup98Q6PFD9 Rpl21-ps14-201ENSMUST00000080279 483 ntBASIC4.02□□□□□ -1.77
Nup98Q6PFD9 Olfr1066-201ENSMUST00000099885 942 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
Nup98Q6PFD9 Nfia-204ENSMUST00000107057 8913 ntTSL 5 BASIC4.02□□□□□ -1.77
Nup98Q6PFD9 1700080O16Rik-201ENSMUST00000033449 1454 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
Nup98Q6PFD9 Olfr1231-202ENSMUST00000216144 3961 ntAPPRIS P1 TSL 3 BASIC4.02□□□□□ -1.77
Nup98Q6PFD9 Gm37124-201ENSMUST00000192140 1992 ntBASIC4.02□□□□□ -1.77
Nup98Q6PFD9 Olfr397-201ENSMUST00000121280 1091 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
Nup98Q6PFD9 Gm15875-201ENSMUST00000152264 273 ntTSL 3 BASIC4.02□□□□□ -1.77
Nup98Q6PFD9 Gm29104-201ENSMUST00000186304 222 ntBASIC4.02□□□□□ -1.77
Nup98Q6PFD9 Gm28655-201ENSMUST00000191538 692 ntBASIC4.02□□□□□ -1.77
Nup98Q6PFD9 Spcs2-205ENSMUST00000207580 868 ntTSL 5 BASIC4.02□□□□□ -1.77
Retrieved 100 of 76,532 protein–RNA pairs in 64.1 ms