Protein–RNA interactions for Protein: Q69ZI1

Sh3rf1, E3 ubiquitin-protein ligase SH3RF1, mousemouse

Predictions only

Length 892 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1Q69ZI1 Gm19708-201ENSMUST00000199386 543 ntTSL 2 BASIC5.54□□□□□ -1.52
Sh3rf1Q69ZI1 Gm45048-201ENSMUST00000207058 429 ntBASIC5.54□□□□□ -1.52
Sh3rf1Q69ZI1 Gm4587-201ENSMUST00000209135 637 ntBASIC5.54□□□□□ -1.52
Sh3rf1Q69ZI1 Gm45777-201ENSMUST00000213009 301 ntBASIC5.54□□□□□ -1.52
Sh3rf1Q69ZI1 Gm10709-201ENSMUST00000213318 480 ntBASIC5.54□□□□□ -1.52
Sh3rf1Q69ZI1 AC159821.1-201ENSMUST00000214934 248 ntTSL 3 BASIC5.54□□□□□ -1.52
Sh3rf1Q69ZI1 Rpl17-ps2-201ENSMUST00000218101 532 ntBASIC5.54□□□□□ -1.52
Sh3rf1Q69ZI1 Gm8785-201ENSMUST00000220259 487 ntBASIC5.54□□□□□ -1.52
Sh3rf1Q69ZI1 Gm31849-201ENSMUST00000220306 375 ntBASIC5.54□□□□□ -1.52
Sh3rf1Q69ZI1 Tmed10-203ENSMUST00000222585 619 ntTSL 3 BASIC5.54□□□□□ -1.52
Sh3rf1Q69ZI1 Gm7768-201ENSMUST00000222988 597 ntBASIC5.54□□□□□ -1.52
Sh3rf1Q69ZI1 Tpbpa-202ENSMUST00000225275 642 ntAPPRIS ALT2 BASIC5.54□□□□□ -1.52
Sh3rf1Q69ZI1 AC137117.1-201ENSMUST00000226912 441 ntBASIC5.54□□□□□ -1.52
Sh3rf1Q69ZI1 AC167013.2-202ENSMUST00000227035 333 ntBASIC5.54□□□□□ -1.52
Sh3rf1Q69ZI1 Gm4017-201ENSMUST00000084813 338 ntBASIC5.54□□□□□ -1.52
Sh3rf1Q69ZI1 Gm6177-201ENSMUST00000085589 465 ntBASIC5.54□□□□□ -1.52
Sh3rf1Q69ZI1 Gm29293-201ENSMUST00000189416 2188 ntBASIC5.54□□□□□ -1.52
Sh3rf1Q69ZI1 Olfr1443-203ENSMUST00000215134 3995 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Sh3rf1Q69ZI1 Gm26760-201ENSMUST00000181901 1604 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Sh3rf1Q69ZI1 Fbxl13-201ENSMUST00000051358 2531 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Sh3rf1Q69ZI1 Zkscan8-204ENSMUST00000224362 6954 ntAPPRIS ALT2 BASIC5.54□□□□□ -1.52
Sh3rf1Q69ZI1 Gm18852-201ENSMUST00000184149 3593 ntBASIC5.54□□□□□ -1.52
Sh3rf1Q69ZI1 Cntnap5c-201ENSMUST00000076038 3931 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
Sh3rf1Q69ZI1 Vmn2r94-201ENSMUST00000172190 2457 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Sh3rf1Q69ZI1 Gm43027-201ENSMUST00000202906 3691 ntBASIC5.54□□□□□ -1.52
Sh3rf1Q69ZI1 Olfr441-202ENSMUST00000213649 2402 ntAPPRIS P1 TSL 3 BASIC5.54□□□□□ -1.52
Sh3rf1Q69ZI1 Gm31258-201ENSMUST00000194532 3297 ntBASIC5.54□□□□□ -1.52
Sh3rf1Q69ZI1 Naip6-202ENSMUST00000118574 6827 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Sh3rf1Q69ZI1 Olfr1444-202ENSMUST00000213606 1872 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Sh3rf1Q69ZI1 Gm3696-201ENSMUST00000167923 1814 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Sh3rf1Q69ZI1 Gm4541-201ENSMUST00000208901 1848 ntBASIC5.53□□□□□ -1.52
Sh3rf1Q69ZI1 Vmn1r71-201ENSMUST00000079113 4996 ntAPPRIS P2 BASIC5.53□□□□□ -1.52
Sh3rf1Q69ZI1 Olfr1140-203ENSMUST00000217572 1327 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
Sh3rf1Q69ZI1 Gm43462-201ENSMUST00000200265 3648 ntBASIC5.53□□□□□ -1.52
Sh3rf1Q69ZI1 Vmn1r200-204ENSMUST00000227326 5449 ntAPPRIS ALT2 BASIC5.53□□□□□ -1.52
Sh3rf1Q69ZI1 Map9-201ENSMUST00000091014 6218 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Sh3rf1Q69ZI1 Olfr57-202ENSMUST00000203906 1647 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Sh3rf1Q69ZI1 Gm34549-201ENSMUST00000207057 1611 ntTSL 5 BASIC5.53□□□□□ -1.52
Sh3rf1Q69ZI1 Far2-202ENSMUST00000111607 3395 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Sh3rf1Q69ZI1 Mir450-2-201ENSMUST00000102444 69 ntBASIC5.53□□□□□ -1.52
Sh3rf1Q69ZI1 Gm14750-201ENSMUST00000118262 516 ntBASIC5.53□□□□□ -1.52
Sh3rf1Q69ZI1 Gm14831-201ENSMUST00000120253 409 ntBASIC5.53□□□□□ -1.52
Sh3rf1Q69ZI1 Gm12543-201ENSMUST00000120410 543 ntBASIC5.53□□□□□ -1.52
Sh3rf1Q69ZI1 Gmfg-ps-201ENSMUST00000121071 427 ntBASIC5.53□□□□□ -1.52
Sh3rf1Q69ZI1 Gm14736-201ENSMUST00000121470 336 ntBASIC5.53□□□□□ -1.52
Sh3rf1Q69ZI1 Xlr5e-ps-201ENSMUST00000122043 711 ntBASIC5.53□□□□□ -1.52
Sh3rf1Q69ZI1 Ftx-201ENSMUST00000123841 673 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Sh3rf1Q69ZI1 Tmem216-206ENSMUST00000154383 927 ntAPPRIS P1 TSL 3 BASIC5.53□□□□□ -1.52
Sh3rf1Q69ZI1 Gm3470-201ENSMUST00000160819 420 ntBASIC5.53□□□□□ -1.52
Sh3rf1Q69ZI1 Obox4-ps26-201ENSMUST00000176368 724 ntBASIC5.53□□□□□ -1.52
Sh3rf1Q69ZI1 Obox4-ps14-201ENSMUST00000177198 1127 ntBASIC5.53□□□□□ -1.52
Sh3rf1Q69ZI1 Gm25671-201ENSMUST00000178612 105 ntBASIC5.53□□□□□ -1.52
Sh3rf1Q69ZI1 Gm22851-201ENSMUST00000178741 94 ntBASIC5.53□□□□□ -1.52
Sh3rf1Q69ZI1 Gm23307-201ENSMUST00000179167 105 ntBASIC5.53□□□□□ -1.52
Sh3rf1Q69ZI1 Gm25286-201ENSMUST00000179790 105 ntBASIC5.53□□□□□ -1.52
Sh3rf1Q69ZI1 Gm27266-201ENSMUST00000184521 123 ntBASIC5.53□□□□□ -1.52
Sh3rf1Q69ZI1 4930553J12Rik-202ENSMUST00000187823 851 ntBASIC5.53□□□□□ -1.52
Sh3rf1Q69ZI1 Gm28792-201ENSMUST00000191482 419 ntTSL 3 BASIC5.53□□□□□ -1.52
Sh3rf1Q69ZI1 Gm8325-202ENSMUST00000193411 182 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Sh3rf1Q69ZI1 Gm38108-201ENSMUST00000193891 399 ntTSL 5 BASIC5.53□□□□□ -1.52
Sh3rf1Q69ZI1 Mir6516-201ENSMUST00000196236 110 ntBASIC5.53□□□□□ -1.52
Sh3rf1Q69ZI1 Gm43723-201ENSMUST00000196886 189 ntBASIC5.53□□□□□ -1.52
Sh3rf1Q69ZI1 Gm44319-201ENSMUST00000196974 93 ntBASIC5.53□□□□□ -1.52
Sh3rf1Q69ZI1 Gm7838-201ENSMUST00000203221 1189 ntBASIC5.53□□□□□ -1.52
Sh3rf1Q69ZI1 Gm44997-202ENSMUST00000205970 425 ntTSL 3 BASIC5.53□□□□□ -1.52
Sh3rf1Q69ZI1 Gm4756-203ENSMUST00000208307 798 ntTSL 3 BASIC5.53□□□□□ -1.52
Sh3rf1Q69ZI1 AC153505.2-201ENSMUST00000217741 277 ntBASIC5.53□□□□□ -1.52
Sh3rf1Q69ZI1 CT030187.1-201ENSMUST00000220605 252 ntBASIC5.53□□□□□ -1.52
Sh3rf1Q69ZI1 Gm46369-201ENSMUST00000221577 401 ntBASIC5.53□□□□□ -1.52
Sh3rf1Q69ZI1 AC126554.2-201ENSMUST00000223259 400 ntBASIC5.53□□□□□ -1.52
Sh3rf1Q69ZI1 AC134420.1-201ENSMUST00000227027 289 ntBASIC5.53□□□□□ -1.52
Sh3rf1Q69ZI1 Cst9-201ENSMUST00000028935 687 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Sh3rf1Q69ZI1 Olfr474-201ENSMUST00000054434 933 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
Sh3rf1Q69ZI1 Defa34-201ENSMUST00000075268 375 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
Sh3rf1Q69ZI1 Gm16415-201ENSMUST00000080097 489 ntBASIC5.53□□□□□ -1.52
Sh3rf1Q69ZI1 Gm22572-201ENSMUST00000082985 105 ntBASIC5.53□□□□□ -1.52
Sh3rf1Q69ZI1 Defa5-201ENSMUST00000098892 376 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Sh3rf1Q69ZI1 Olfr448-202ENSMUST00000213952 3024 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Sh3rf1Q69ZI1 Olfr685-202ENSMUST00000209409 3179 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
Sh3rf1Q69ZI1 Gm42662-201ENSMUST00000202539 1431 ntBASIC5.53□□□□□ -1.52
Sh3rf1Q69ZI1 Cyp4a31-201ENSMUST00000030480 2396 ntTSL 2 BASIC5.53□□□□□ -1.52
Sh3rf1Q69ZI1 Olfr995-202ENSMUST00000216933 1706 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Sh3rf1Q69ZI1 Gm36229-201ENSMUST00000218737 1855 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Sh3rf1Q69ZI1 Lcor-202ENSMUST00000163929 4663 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Sh3rf1Q69ZI1 Slc39a12-202ENSMUST00000114731 2648 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
Sh3rf1Q69ZI1 Mecom-212ENSMUST00000173495 5066 ntAPPRIS P5 TSL 5 BASIC5.53□□□□□ -1.52
Sh3rf1Q69ZI1 Ints6l-202ENSMUST00000101553 3201 ntTSL 2 BASIC5.53□□□□□ -1.52
Sh3rf1Q69ZI1 Il31ra-201ENSMUST00000051756 3680 ntAPPRIS P2 TSL 1 (best) BASIC5.53□□□□□ -1.52
Sh3rf1Q69ZI1 Gm44847-201ENSMUST00000207104 1991 ntBASIC5.53□□□□□ -1.52
Sh3rf1Q69ZI1 Zscan4-ps2-201ENSMUST00000091440 2277 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Sh3rf1Q69ZI1 Gm8979-201ENSMUST00000183386 7296 ntBASIC5.53□□□□□ -1.52
Sh3rf1Q69ZI1 Vmn2r-ps57-201ENSMUST00000173861 2598 ntBASIC5.53□□□□□ -1.52
Sh3rf1Q69ZI1 Olfr31-202ENSMUST00000206009 4017 ntAPPRIS P1 TSL 2 BASIC5.52□□□□□ -1.53
Sh3rf1Q69ZI1 Gm16041-201ENSMUST00000144339 3725 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Sh3rf1Q69ZI1 Ryr3-211ENSMUST00000208290 15468 ntAPPRIS P3 TSL 5 BASIC5.52□□□□□ -1.53
Sh3rf1Q69ZI1 Gm5890-201ENSMUST00000190145 1336 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Sh3rf1Q69ZI1 Gm19131-202ENSMUST00000203464 3208 ntBASIC5.52□□□□□ -1.53
Sh3rf1Q69ZI1 Gm12185-202ENSMUST00000094476 5264 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
Sh3rf1Q69ZI1 Tmem45a2-201ENSMUST00000067173 3073 ntAPPRIS P1 TSL 2 BASIC5.52□□□□□ -1.53
Sh3rf1Q69ZI1 AC132852.1-201ENSMUST00000214683 2324 ntBASIC5.52□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 76.2 ms