Protein–RNA interactions for Protein: Q5SNZ0

Ccdc88a, Girdin, mousemouse

Predictions only

Length 1,873 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88aQ5SNZ0 Cdh12-201ENSMUST00000075132 5636 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
Ccdc88aQ5SNZ0 Gm23530-201ENSMUST00000104564 137 ntBASIC4.18□□□□□ -1.74
Ccdc88aQ5SNZ0 Gm13853-201ENSMUST00000155496 557 ntTSL 3 BASIC4.18□□□□□ -1.74
Ccdc88aQ5SNZ0 Gm5058-201ENSMUST00000187331 463 ntBASIC4.18□□□□□ -1.74
Ccdc88aQ5SNZ0 Gm38093-201ENSMUST00000195210 710 ntTSL 3 BASIC4.18□□□□□ -1.74
Ccdc88aQ5SNZ0 Gm44320-201ENSMUST00000199276 86 ntBASIC4.18□□□□□ -1.74
Ccdc88aQ5SNZ0 1700014L14Rik-201ENSMUST00000211704 481 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
Ccdc88aQ5SNZ0 Olfr732-202ENSMUST00000213701 3862 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
Ccdc88aQ5SNZ0 Gpr34-201ENSMUST00000041708 2088 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
Ccdc88aQ5SNZ0 Mmp1b-201ENSMUST00000047888 1449 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
Ccdc88aQ5SNZ0 Arrdc3-201ENSMUST00000099356 4101 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
Ccdc88aQ5SNZ0 Cfhr1-201ENSMUST00000023965 1793 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
Ccdc88aQ5SNZ0 Fam111a-204ENSMUST00000151307 3687 ntAPPRIS ALT2 TSL 5 BASIC4.17□□□□□ -1.74
Ccdc88aQ5SNZ0 Olfr629-203ENSMUST00000216300 2277 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
Ccdc88aQ5SNZ0 Gm44220-201ENSMUST00000203784 2487 ntBASIC4.17□□□□□ -1.74
Ccdc88aQ5SNZ0 Mup-ps10-201ENSMUST00000119626 556 ntBASIC4.17□□□□□ -1.74
Ccdc88aQ5SNZ0 Gm13508-201ENSMUST00000121639 775 ntBASIC4.17□□□□□ -1.74
Ccdc88aQ5SNZ0 Gm12071-201ENSMUST00000121968 469 ntBASIC4.17□□□□□ -1.74
Ccdc88aQ5SNZ0 Gm17216-201ENSMUST00000130872 728 ntTSL 5 BASIC4.17□□□□□ -1.74
Ccdc88aQ5SNZ0 Gm12082-201ENSMUST00000138164 600 ntTSL 3 BASIC4.17□□□□□ -1.74
Ccdc88aQ5SNZ0 Gm13839-201ENSMUST00000151639 506 ntTSL 2 BASIC4.17□□□□□ -1.74
Ccdc88aQ5SNZ0 Gm27783-201ENSMUST00000183534 105 ntBASIC4.17□□□□□ -1.74
Ccdc88aQ5SNZ0 Gm29148-201ENSMUST00000188140 336 ntBASIC4.17□□□□□ -1.74
Ccdc88aQ5SNZ0 B230207O21Rik-201ENSMUST00000198634 321 ntBASIC4.17□□□□□ -1.74
Ccdc88aQ5SNZ0 Sult1c2-ps1-201ENSMUST00000200231 164 ntBASIC4.17□□□□□ -1.74
Ccdc88aQ5SNZ0 Gm8319-201ENSMUST00000205708 641 ntBASIC4.17□□□□□ -1.74
Ccdc88aQ5SNZ0 AC160134.1-201ENSMUST00000213450 551 ntBASIC4.17□□□□□ -1.74
Ccdc88aQ5SNZ0 AC153932.1-201ENSMUST00000218558 787 ntBASIC4.17□□□□□ -1.74
Ccdc88aQ5SNZ0 Gm26449-201ENSMUST00000082452 104 ntBASIC4.17□□□□□ -1.74
Ccdc88aQ5SNZ0 Csmd3-201ENSMUST00000100670 13022 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
Ccdc88aQ5SNZ0 Gm37742-201ENSMUST00000193263 3979 ntBASIC4.17□□□□□ -1.74
Ccdc88aQ5SNZ0 Pik3c2a-201ENSMUST00000170430 8044 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
Ccdc88aQ5SNZ0 Olfr168-202ENSMUST00000213480 2205 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
Ccdc88aQ5SNZ0 Gm14586-201ENSMUST00000119571 408 ntBASIC4.16□□□□□ -1.74
Ccdc88aQ5SNZ0 Gm15377-201ENSMUST00000119594 246 ntBASIC4.16□□□□□ -1.74
Ccdc88aQ5SNZ0 Gm12543-201ENSMUST00000120410 543 ntBASIC4.16□□□□□ -1.74
Ccdc88aQ5SNZ0 4930555B12Rik-201ENSMUST00000135444 283 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
Ccdc88aQ5SNZ0 Gm15640-201ENSMUST00000152070 527 ntTSL 2 BASIC4.16□□□□□ -1.74
Ccdc88aQ5SNZ0 Gm29114-201ENSMUST00000187100 2508 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
Ccdc88aQ5SNZ0 Gm28113-201ENSMUST00000188280 229 ntBASIC4.16□□□□□ -1.74
Ccdc88aQ5SNZ0 Gm28358-202ENSMUST00000189292 223 ntBASIC4.16□□□□□ -1.74
Ccdc88aQ5SNZ0 Gm17966-201ENSMUST00000193453 594 ntBASIC4.16□□□□□ -1.74
Ccdc88aQ5SNZ0 Olfr1492-ps1-201ENSMUST00000207071 865 ntBASIC4.16□□□□□ -1.74
Ccdc88aQ5SNZ0 Gm39147-201ENSMUST00000211376 465 ntBASIC4.16□□□□□ -1.74
Ccdc88aQ5SNZ0 Olfr1104-203ENSMUST00000215972 2797 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
Ccdc88aQ5SNZ0 Olfr1322-202ENSMUST00000217355 3886 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
Ccdc88aQ5SNZ0 Olfr1471-205ENSMUST00000217482 1545 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
Ccdc88aQ5SNZ0 4930469B13Rik-202ENSMUST00000224808 348 ntBASIC4.16□□□□□ -1.74
Ccdc88aQ5SNZ0 Olfr1454-204ENSMUST00000217568 4215 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
Ccdc88aQ5SNZ0 Gm10287-202ENSMUST00000180599 4059 ntBASIC4.16□□□□□ -1.74
Ccdc88aQ5SNZ0 Mndal-201ENSMUST00000111210 1907 ntAPPRIS P2 TSL 5 BASIC4.16□□□□□ -1.74
Ccdc88aQ5SNZ0 Gm37703-201ENSMUST00000192292 1784 ntBASIC4.16□□□□□ -1.74
Ccdc88aQ5SNZ0 Gm25308-201ENSMUST00000104171 158 ntBASIC4.15□□□□□ -1.74
Ccdc88aQ5SNZ0 Ube2v2-204ENSMUST00000118236 893 ntTSL 5 BASIC4.15□□□□□ -1.74
Ccdc88aQ5SNZ0 Gm3835-201ENSMUST00000120752 403 ntBASIC4.15□□□□□ -1.74
Ccdc88aQ5SNZ0 2610001J05Rik-202ENSMUST00000155856 1077 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
Ccdc88aQ5SNZ0 Gm22034-201ENSMUST00000157283 134 ntBASIC4.15□□□□□ -1.74
Ccdc88aQ5SNZ0 Gm23591-201ENSMUST00000157663 286 ntBASIC4.15□□□□□ -1.74
Ccdc88aQ5SNZ0 Mir5127-201ENSMUST00000175295 71 ntBASIC4.15□□□□□ -1.74
Ccdc88aQ5SNZ0 Gm9947-202ENSMUST00000187401 687 ntTSL 5 BASIC4.15□□□□□ -1.74
Ccdc88aQ5SNZ0 Gm37698-201ENSMUST00000192605 463 ntBASIC4.15□□□□□ -1.74
Ccdc88aQ5SNZ0 2210017I01Rik-201ENSMUST00000195278 822 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
Ccdc88aQ5SNZ0 Gm8681-201ENSMUST00000219115 618 ntBASIC4.15□□□□□ -1.74
Ccdc88aQ5SNZ0 AC160972.1-201ENSMUST00000220971 644 ntTSL 2 BASIC4.15□□□□□ -1.74
Ccdc88aQ5SNZ0 4930453C13Rik-201ENSMUST00000222376 765 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
Ccdc88aQ5SNZ0 Olfr625-ps1-201ENSMUST00000098195 966 ntAPPRIS P5 BASIC4.15□□□□□ -1.74
Ccdc88aQ5SNZ0 Gm43032-201ENSMUST00000197967 3123 ntBASIC4.15□□□□□ -1.74
Ccdc88aQ5SNZ0 Zfp788-201ENSMUST00000045720 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.74
Ccdc88aQ5SNZ0 Rab30-201ENSMUST00000032879 9456 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
Ccdc88aQ5SNZ0 Olfr1101-202ENSMUST00000214411 3235 ntAPPRIS P1 TSL 3 BASIC4.15□□□□□ -1.74
Ccdc88aQ5SNZ0 Olfr1298-202ENSMUST00000208284 1563 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.74
Ccdc88aQ5SNZ0 Vmn1r174-202ENSMUST00000228331 9058 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
Ccdc88aQ5SNZ0 Gm8989-201ENSMUST00000184782 7275 ntBASIC4.15□□□□□ -1.75
Ccdc88aQ5SNZ0 9530034E10Rik-201ENSMUST00000146982 502 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
Ccdc88aQ5SNZ0 Gm17191-201ENSMUST00000165200 417 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
Ccdc88aQ5SNZ0 Gm6445-201ENSMUST00000189515 1112 ntBASIC4.15□□□□□ -1.75
Ccdc88aQ5SNZ0 Fabp9-203ENSMUST00000193487 486 ntTSL 3 BASIC4.15□□□□□ -1.75
Ccdc88aQ5SNZ0 Gm21007-201ENSMUST00000221024 326 ntBASIC4.15□□□□□ -1.75
Ccdc88aQ5SNZ0 AC107757.3-201ENSMUST00000226312 535 ntBASIC4.15□□□□□ -1.75
Ccdc88aQ5SNZ0 AC107453.2-201ENSMUST00000227714 655 ntBASIC4.15□□□□□ -1.75
Ccdc88aQ5SNZ0 Olfr199-201ENSMUST00000099657 931 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
Ccdc88aQ5SNZ0 Cyp3a13-201ENSMUST00000031741 2956 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
Ccdc88aQ5SNZ0 Olfr741-202ENSMUST00000205518 3406 ntAPPRIS P1 TSL 2 BASIC4.14□□□□□ -1.75
Ccdc88aQ5SNZ0 2610002M06Rik-201ENSMUST00000120722 5842 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
Ccdc88aQ5SNZ0 Olfr1162-202ENSMUST00000183862 4800 ntAPPRIS P1 TSL 2 BASIC4.14□□□□□ -1.75
Ccdc88aQ5SNZ0 AC155830.1-201ENSMUST00000220050 3836 ntBASIC4.14□□□□□ -1.75
Ccdc88aQ5SNZ0 Olfr665-204ENSMUST00000216971 3248 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
Ccdc88aQ5SNZ0 Gm14014-201ENSMUST00000156718 2717 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
Ccdc88aQ5SNZ0 Gm44283-201ENSMUST00000204461 3950 ntBASIC4.14□□□□□ -1.75
Ccdc88aQ5SNZ0 Ssx9-201ENSMUST00000103001 602 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
Ccdc88aQ5SNZ0 Olfr1235-ps1-201ENSMUST00000117898 314 ntBASIC4.14□□□□□ -1.75
Ccdc88aQ5SNZ0 Gm7308-201ENSMUST00000121087 447 ntBASIC4.14□□□□□ -1.75
Ccdc88aQ5SNZ0 Ighv1-46-201ENSMUST00000193988 351 ntBASIC4.14□□□□□ -1.75
Ccdc88aQ5SNZ0 5430434I15Rik-201ENSMUST00000197658 1257 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
Ccdc88aQ5SNZ0 Olfr206-202ENSMUST00000207927 1122 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
Ccdc88aQ5SNZ0 Gm40884-201ENSMUST00000223505 541 ntTSL 3 BASIC4.14□□□□□ -1.75
Ccdc88aQ5SNZ0 Acrv1-201ENSMUST00000034620 1101 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
Ccdc88aQ5SNZ0 Olfr744-201ENSMUST00000066457 1105 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
Ccdc88aQ5SNZ0 Olfr134-201ENSMUST00000074883 939 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
Ccdc88aQ5SNZ0 Olfr1286-202ENSMUST00000184954 3398 ntAPPRIS P1 TSL 3 BASIC4.14□□□□□ -1.75
Retrieved 100 of 76,532 protein–RNA pairs in 78.9 ms