Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 Gm45809-201ENSMUST00000211661 3894 ntBASIC3.96□□□□□ -1.77
Upf3bQ3ULL6 Csmd3-204ENSMUST00000160658 12460 ntTSL 5 BASIC3.96□□□□□ -1.78
Upf3bQ3ULL6 Slc22a30-203ENSMUST00000120540 2598 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
Upf3bQ3ULL6 Rps15a-ps7-201ENSMUST00000117430 392 ntBASIC3.96□□□□□ -1.78
Upf3bQ3ULL6 Gm8475-201ENSMUST00000118211 526 ntBASIC3.96□□□□□ -1.78
Upf3bQ3ULL6 Gm4910-201ENSMUST00000119605 366 ntBASIC3.96□□□□□ -1.78
Upf3bQ3ULL6 Mup-ps21-201ENSMUST00000119998 448 ntBASIC3.96□□□□□ -1.78
Upf3bQ3ULL6 Gm12358-201ENSMUST00000121842 520 ntBASIC3.96□□□□□ -1.78
Upf3bQ3ULL6 n-R5s68-201ENSMUST00000122639 82 ntBASIC3.96□□□□□ -1.78
Upf3bQ3ULL6 Gm22988-201ENSMUST00000122759 144 ntBASIC3.96□□□□□ -1.78
Upf3bQ3ULL6 Gm15533-201ENSMUST00000126205 465 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
Upf3bQ3ULL6 Gm6969-201ENSMUST00000140065 342 ntBASIC3.96□□□□□ -1.78
Upf3bQ3ULL6 Gm21814-201ENSMUST00000144085 291 ntTSL 5 BASIC3.96□□□□□ -1.78
Upf3bQ3ULL6 Gm12971-201ENSMUST00000154720 511 ntTSL 5 BASIC3.96□□□□□ -1.78
Upf3bQ3ULL6 Gm24244-201ENSMUST00000157317 130 ntBASIC3.96□□□□□ -1.78
Upf3bQ3ULL6 Mpc1-ps-201ENSMUST00000181662 330 ntBASIC3.96□□□□□ -1.78
Upf3bQ3ULL6 Gm4854-201ENSMUST00000185902 574 ntBASIC3.96□□□□□ -1.78
Upf3bQ3ULL6 Gm29387-201ENSMUST00000189074 623 ntTSL 3 BASIC3.96□□□□□ -1.78
Upf3bQ3ULL6 Gm36934-201ENSMUST00000192007 306 ntBASIC3.96□□□□□ -1.78
Upf3bQ3ULL6 Gm38283-201ENSMUST00000193041 695 ntBASIC3.96□□□□□ -1.78
Upf3bQ3ULL6 9530022L04Rik-201ENSMUST00000194340 310 ntBASIC3.96□□□□□ -1.78
Upf3bQ3ULL6 Gm43441-201ENSMUST00000201458 205 ntBASIC3.96□□□□□ -1.78
Upf3bQ3ULL6 Gm44475-201ENSMUST00000204041 424 ntBASIC3.96□□□□□ -1.78
Upf3bQ3ULL6 Gm45367-201ENSMUST00000210171 347 ntBASIC3.96□□□□□ -1.78
Upf3bQ3ULL6 Gm8106-201ENSMUST00000213123 523 ntBASIC3.96□□□□□ -1.78
Upf3bQ3ULL6 AC140209.1-201ENSMUST00000227875 284 ntBASIC3.96□□□□□ -1.78
Upf3bQ3ULL6 AC130673.2-201ENSMUST00000228091 797 ntBASIC3.96□□□□□ -1.78
Upf3bQ3ULL6 Snord21-201ENSMUST00000082519 94 ntBASIC3.96□□□□□ -1.78
Upf3bQ3ULL6 Mir133a-2-201ENSMUST00000083526 104 ntBASIC3.96□□□□□ -1.78
Upf3bQ3ULL6 Mir26a-1-201ENSMUST00000083579 90 ntBASIC3.96□□□□□ -1.78
Upf3bQ3ULL6 Gm45033-201ENSMUST00000206710 3167 ntBASIC3.96□□□□□ -1.78
Upf3bQ3ULL6 Hsfy2-201ENSMUST00000062085 1392 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
Upf3bQ3ULL6 Olfr1130-201ENSMUST00000213103 2643 ntAPPRIS P1 TSL 3 BASIC3.96□□□□□ -1.78
Upf3bQ3ULL6 Obscn-203ENSMUST00000052872 23006 ntTSL 5 BASIC3.96□□□□□ -1.78
Upf3bQ3ULL6 Olfr1251-201ENSMUST00000214304 3133 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
Upf3bQ3ULL6 Gulp1-206ENSMUST00000162600 2798 ntTSL 5 BASIC3.96□□□□□ -1.78
Upf3bQ3ULL6 Gm37298-201ENSMUST00000193770 3868 ntBASIC3.95□□□□□ -1.78
Upf3bQ3ULL6 Gm37176-201ENSMUST00000193300 4051 ntBASIC3.95□□□□□ -1.78
Upf3bQ3ULL6 Gm18719-201ENSMUST00000196696 1413 ntBASIC3.95□□□□□ -1.78
Upf3bQ3ULL6 Olfr616-203ENSMUST00000217293 1627 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
Upf3bQ3ULL6 Skint3-202ENSMUST00000170945 3843 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
Upf3bQ3ULL6 Fbxw14-203ENSMUST00000198844 1786 ntAPPRIS P3 TSL 1 (best) BASIC3.95□□□□□ -1.78
Upf3bQ3ULL6 Olfr715-202ENSMUST00000214919 5114 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
Upf3bQ3ULL6 Gm12427-201ENSMUST00000117719 302 ntBASIC3.95□□□□□ -1.78
Upf3bQ3ULL6 Gm12387-201ENSMUST00000118573 955 ntBASIC3.95□□□□□ -1.78
Upf3bQ3ULL6 Gm13155-201ENSMUST00000119277 646 ntBASIC3.95□□□□□ -1.78
Upf3bQ3ULL6 Gm12757-201ENSMUST00000119465 800 ntBASIC3.95□□□□□ -1.78
Upf3bQ3ULL6 Gm14991-201ENSMUST00000119913 598 ntBASIC3.95□□□□□ -1.78
Upf3bQ3ULL6 Gm15387-201ENSMUST00000120421 648 ntBASIC3.95□□□□□ -1.78
Upf3bQ3ULL6 Gm8178-201ENSMUST00000121570 646 ntBASIC3.95□□□□□ -1.78
Upf3bQ3ULL6 Gm24961-201ENSMUST00000157918 184 ntBASIC3.95□□□□□ -1.78
Upf3bQ3ULL6 R3hcc1l-202ENSMUST00000160107 950 ntAPPRIS ALT2 TSL 2 BASIC3.95□□□□□ -1.78
Upf3bQ3ULL6 Cylc2-203ENSMUST00000166749 1297 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
Upf3bQ3ULL6 Vmn1r-ps71-201ENSMUST00000172648 924 ntBASIC3.95□□□□□ -1.78
Upf3bQ3ULL6 Hmgb1-ps7-201ENSMUST00000173370 648 ntBASIC3.95□□□□□ -1.78
Upf3bQ3ULL6 Mir5710-201ENSMUST00000176884 69 ntBASIC3.95□□□□□ -1.78
Upf3bQ3ULL6 Gm29038-201ENSMUST00000191543 678 ntBASIC3.95□□□□□ -1.78
Upf3bQ3ULL6 Gm37293-201ENSMUST00000191658 295 ntBASIC3.95□□□□□ -1.78
Upf3bQ3ULL6 Gm37495-201ENSMUST00000194590 264 ntBASIC3.95□□□□□ -1.78
Upf3bQ3ULL6 Gm18429-201ENSMUST00000198707 421 ntBASIC3.95□□□□□ -1.78
Upf3bQ3ULL6 Gm18672-201ENSMUST00000208035 270 ntBASIC3.95□□□□□ -1.78
Upf3bQ3ULL6 Gm34272-201ENSMUST00000208886 253 ntBASIC3.95□□□□□ -1.78
Upf3bQ3ULL6 Gm44887-201ENSMUST00000208980 178 ntBASIC3.95□□□□□ -1.78
Upf3bQ3ULL6 Gm3690-201ENSMUST00000211341 262 ntBASIC3.95□□□□□ -1.78
Upf3bQ3ULL6 CT025680.1-201ENSMUST00000217375 375 ntBASIC3.95□□□□□ -1.78
Upf3bQ3ULL6 Gm17820-201ENSMUST00000220213 1068 ntBASIC3.95□□□□□ -1.78
Upf3bQ3ULL6 Gpx8-201ENSMUST00000022282 1018 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
Upf3bQ3ULL6 Gm5518-201ENSMUST00000084171 648 ntBASIC3.95□□□□□ -1.78
Upf3bQ3ULL6 Gm10704-201ENSMUST00000098952 730 ntBASIC3.95□□□□□ -1.78
Upf3bQ3ULL6 Gm45884-201ENSMUST00000209540 3416 ntBASIC3.95□□□□□ -1.78
Upf3bQ3ULL6 Gm45264-201ENSMUST00000210090 3995 ntBASIC3.95□□□□□ -1.78
Upf3bQ3ULL6 Zfp600-204ENSMUST00000168483 4244 ntAPPRIS P1 TSL 2 BASIC3.95□□□□□ -1.78
Upf3bQ3ULL6 Olfr392-201ENSMUST00000118463 3643 ntAPPRIS P1 TSL 2 BASIC3.95□□□□□ -1.78
Upf3bQ3ULL6 Slc9c1-201ENSMUST00000159945 3836 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
Upf3bQ3ULL6 Vmn2r46-201ENSMUST00000171523 2430 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
Upf3bQ3ULL6 Fancb-201ENSMUST00000057150 2422 ntAPPRIS ALT2 TSL 5 BASIC3.94□□□□□ -1.78
Upf3bQ3ULL6 Erbin-205ENSMUST00000188997 5084 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
Upf3bQ3ULL6 Pik3c2a-201ENSMUST00000170430 8044 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
Upf3bQ3ULL6 Tfpi-202ENSMUST00000090732 3576 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
Upf3bQ3ULL6 Gm14621-201ENSMUST00000117709 689 ntBASIC3.94□□□□□ -1.78
Upf3bQ3ULL6 Gm11483-201ENSMUST00000119839 247 ntBASIC3.94□□□□□ -1.78
Upf3bQ3ULL6 Gm14037-201ENSMUST00000120576 313 ntBASIC3.94□□□□□ -1.78
Upf3bQ3ULL6 Smt3h2-ps4-201ENSMUST00000121569 288 ntBASIC3.94□□□□□ -1.78
Upf3bQ3ULL6 AI662270-201ENSMUST00000142709 304 ntTSL 2 BASIC3.94□□□□□ -1.78
Upf3bQ3ULL6 Gm24059-201ENSMUST00000157493 312 ntBASIC3.94□□□□□ -1.78
Upf3bQ3ULL6 Gm22730-201ENSMUST00000158085 171 ntBASIC3.94□□□□□ -1.78
Upf3bQ3ULL6 Gm22890-201ENSMUST00000158642 144 ntBASIC3.94□□□□□ -1.78
Upf3bQ3ULL6 Cst12-202ENSMUST00000168443 546 ntAPPRIS P2 TSL 1 (best) BASIC3.94□□□□□ -1.78
Upf3bQ3ULL6 Esp38-201ENSMUST00000178880 243 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
Upf3bQ3ULL6 Mir6926-201ENSMUST00000184562 68 ntBASIC3.94□□□□□ -1.78
Upf3bQ3ULL6 1700023F02Rik-203ENSMUST00000189619 473 ntTSL 3 BASIC3.94□□□□□ -1.78
Upf3bQ3ULL6 Gm43841-201ENSMUST00000199491 586 ntBASIC3.94□□□□□ -1.78
Upf3bQ3ULL6 4930513D17Rik-203ENSMUST00000202800 1159 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
Upf3bQ3ULL6 Gm45379-201ENSMUST00000211772 549 ntBASIC3.94□□□□□ -1.78
Upf3bQ3ULL6 Ccl5-201ENSMUST00000035938 532 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
Upf3bQ3ULL6 Olfr675-201ENSMUST00000073102 942 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
Upf3bQ3ULL6 Olfr1408-201ENSMUST00000073663 1037 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
Upf3bQ3ULL6 Gm10282-201ENSMUST00000075602 1151 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
Upf3bQ3ULL6 Mir132-201ENSMUST00000083603 66 ntBASIC3.94□□□□□ -1.78
Upf3bQ3ULL6 4932414N04Rik-201ENSMUST00000055930 3519 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
Retrieved 100 of 76,532 protein–RNA pairs in 74.1 ms