Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 Gm15361-201ENSMUST00000119320 444 ntBASIC1.85□□□□□ -2.11
Ush2AQ2QI47 1700027I24Rik-201ENSMUST00000183612 696 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
Ush2AQ2QI47 AC133189.1-201ENSMUST00000198820 140 ntBASIC1.85□□□□□ -2.11
Ush2AQ2QI47 Olfr1233-203ENSMUST00000215469 1205 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
Ush2AQ2QI47 Cdk13-205ENSMUST00000222800 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC1.85□□□□□ -2.11
Ush2AQ2QI47 Vmn1r210-203ENSMUST00000226294 3500 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
Ush2AQ2QI47 Mmrn1-201ENSMUST00000129603 4477 ntAPPRIS P3 TSL 1 (best) BASIC1.85□□□□□ -2.11
Ush2AQ2QI47 Vmn1r80-206ENSMUST00000228028 6918 ntBASIC1.85□□□□□ -2.11
Ush2AQ2QI47 Abcg3-201ENSMUST00000031239 3035 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
Ush2AQ2QI47 AC156025.1-201ENSMUST00000223597 3551 ntBASIC1.85□□□□□ -2.11
Ush2AQ2QI47 Catsper4-202ENSMUST00000105878 632 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
Ush2AQ2QI47 Gm14607-201ENSMUST00000119119 491 ntBASIC1.85□□□□□ -2.11
Ush2AQ2QI47 Gm11746-201ENSMUST00000119843 821 ntBASIC1.85□□□□□ -2.11
Ush2AQ2QI47 Vmn2r-ps86-201ENSMUST00000174812 871 ntBASIC1.85□□□□□ -2.11
Ush2AQ2QI47 Rpl48-ps1-201ENSMUST00000177147 556 ntBASIC1.85□□□□□ -2.11
Ush2AQ2QI47 2010005H15Rik-203ENSMUST00000187742 466 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
Ush2AQ2QI47 Gm19126-201ENSMUST00000207896 509 ntBASIC1.85□□□□□ -2.11
Ush2AQ2QI47 AC152979.1-201ENSMUST00000218214 289 ntBASIC1.85□□□□□ -2.11
Ush2AQ2QI47 CT030657.1-201ENSMUST00000222397 378 ntTSL 5 BASIC1.85□□□□□ -2.11
Ush2AQ2QI47 Vmn1r16-202ENSMUST00000227283 5813 ntAPPRIS P2 BASIC1.85□□□□□ -2.11
Ush2AQ2QI47 Olfr1129-203ENSMUST00000214773 2403 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
Ush2AQ2QI47 AC113059.2-201ENSMUST00000213462 3016 ntBASIC1.85□□□□□ -2.11
Ush2AQ2QI47 Olfr824-203ENSMUST00000215217 3619 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
Ush2AQ2QI47 Gm45378-201ENSMUST00000211063 2711 ntBASIC1.85□□□□□ -2.11
Ush2AQ2QI47 Gm45160-201ENSMUST00000207112 3099 ntBASIC1.85□□□□□ -2.11
Ush2AQ2QI47 5330434G04Rik-203ENSMUST00000142109 3449 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
Ush2AQ2QI47 Rian-201ENSMUST00000180876 8089 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
Ush2AQ2QI47 Olfr1321-202ENSMUST00000215373 4482 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
Ush2AQ2QI47 AC122355.1-201ENSMUST00000228155 4184 ntBASIC1.85□□□□□ -2.11
Ush2AQ2QI47 Gm42621-201ENSMUST00000198114 275 ntBASIC1.85□□□□□ -2.11
Ush2AQ2QI47 Ncoa2-202ENSMUST00000068304 8006 ntTSL 5 BASIC1.85□□□□□ -2.11
Ush2AQ2QI47 Hivep2-205ENSMUST00000191138 9846 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
Ush2AQ2QI47 Gm3604-201ENSMUST00000107989 1677 ntTSL 5 BASIC1.85□□□□□ -2.11
Ush2AQ2QI47 Slitrk6-201ENSMUST00000078386 4240 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
Ush2AQ2QI47 Olfr992-203ENSMUST00000214895 2222 ntAPPRIS P1 TSL 3 BASIC1.85□□□□□ -2.11
Ush2AQ2QI47 Vmn2r30-202ENSMUST00000174368 3688 ntTSL 2 BASIC1.85□□□□□ -2.11
Ush2AQ2QI47 Pum2-216ENSMUST00000178015 5874 ntAPPRIS ALT2 TSL 5 BASIC1.85□□□□□ -2.11
Ush2AQ2QI47 Olfr1238-203ENSMUST00000217237 5761 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
Ush2AQ2QI47 Pcdh19-203ENSMUST00000167944 8407 ntAPPRIS ALT2 TSL 5 BASIC1.85□□□□□ -2.11
Ush2AQ2QI47 AC154627.2-201ENSMUST00000227028 4669 ntBASIC1.85□□□□□ -2.11
Ush2AQ2QI47 Pign-201ENSMUST00000070699 6528 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
Ush2AQ2QI47 Mme-205ENSMUST00000194134 8039 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
Ush2AQ2QI47 Vmn1r200-204ENSMUST00000227326 5449 ntAPPRIS ALT2 BASIC1.85□□□□□ -2.11
Ush2AQ2QI47 Olfr1117-ps1-201ENSMUST00000118736 984 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
Ush2AQ2QI47 Gm13200-201ENSMUST00000138802 258 ntTSL 3 BASIC1.85□□□□□ -2.11
Ush2AQ2QI47 Gm21842-201ENSMUST00000177552 498 ntBASIC1.85□□□□□ -2.11
Ush2AQ2QI47 Gm21626-201ENSMUST00000177791 498 ntBASIC1.85□□□□□ -2.11
Ush2AQ2QI47 Gm21562-201ENSMUST00000177888 498 ntBASIC1.85□□□□□ -2.11
Ush2AQ2QI47 Gm21539-201ENSMUST00000177925 498 ntBASIC1.85□□□□□ -2.11
Ush2AQ2QI47 Gm17469-201ENSMUST00000177942 498 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
Ush2AQ2QI47 Gm17693-201ENSMUST00000178004 498 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
Ush2AQ2QI47 Gm17361-201ENSMUST00000178121 498 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
Ush2AQ2QI47 Gm17522-201ENSMUST00000178144 498 ntBASIC1.85□□□□□ -2.11
Ush2AQ2QI47 Gm21599-201ENSMUST00000178249 498 ntBASIC1.85□□□□□ -2.11
Ush2AQ2QI47 Gm21616-201ENSMUST00000178416 498 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
Ush2AQ2QI47 Gm21914-201ENSMUST00000178452 498 ntBASIC1.85□□□□□ -2.11
Ush2AQ2QI47 Gm17584-201ENSMUST00000178471 498 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
Ush2AQ2QI47 Gm17467-201ENSMUST00000178553 468 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
Ush2AQ2QI47 Gm21723-201ENSMUST00000178692 498 ntBASIC1.85□□□□□ -2.11
Ush2AQ2QI47 Gm21916-201ENSMUST00000178771 498 ntBASIC1.85□□□□□ -2.11
Ush2AQ2QI47 Gm21801-201ENSMUST00000178865 498 ntBASIC1.85□□□□□ -2.11
Ush2AQ2QI47 Gm21633-201ENSMUST00000178941 498 ntBASIC1.85□□□□□ -2.11
Ush2AQ2QI47 Gm17267-201ENSMUST00000178952 499 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
Ush2AQ2QI47 Gm17412-201ENSMUST00000179261 468 ntBASIC1.85□□□□□ -2.11
Ush2AQ2QI47 Gm21821-201ENSMUST00000179646 498 ntBASIC1.85□□□□□ -2.11
Ush2AQ2QI47 Gm17577-201ENSMUST00000179916 468 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
Ush2AQ2QI47 Gm21588-201ENSMUST00000180074 498 ntBASIC1.85□□□□□ -2.11
Ush2AQ2QI47 Gm21780-201ENSMUST00000180128 498 ntBASIC1.85□□□□□ -2.11
Ush2AQ2QI47 Gm21572-201ENSMUST00000180134 498 ntBASIC1.85□□□□□ -2.11
Ush2AQ2QI47 Gm21529-201ENSMUST00000180175 498 ntBASIC1.85□□□□□ -2.11
Ush2AQ2QI47 Gm29370-202ENSMUST00000187476 499 ntBASIC1.85□□□□□ -2.11
Ush2AQ2QI47 Mrgprb13-201ENSMUST00000188191 985 ntBASIC1.85□□□□□ -2.11
Ush2AQ2QI47 Mrgprb1-203ENSMUST00000188918 435 ntTSL 3 BASIC1.85□□□□□ -2.11
Ush2AQ2QI47 Gm38093-201ENSMUST00000195210 710 ntTSL 3 BASIC1.85□□□□□ -2.11
Ush2AQ2QI47 4930402F11Rik-201ENSMUST00000207348 1000 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
Ush2AQ2QI47 Ms4a2-201ENSMUST00000025583 1211 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
Ush2AQ2QI47 Larp4-201ENSMUST00000057632 6527 ntAPPRIS ALT2 TSL 1 (best) BASIC1.85□□□□□ -2.11
Ush2AQ2QI47 Gabpb2-202ENSMUST00000098873 8272 ntAPPRIS P2 TSL 5 BASIC1.85□□□□□ -2.11
Ush2AQ2QI47 Olfr1448-202ENSMUST00000213177 3979 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
Ush2AQ2QI47 Mecom-203ENSMUST00000108271 3851 ntAPPRIS ALT2 TSL 1 (best) BASIC1.85□□□□□ -2.11
Ush2AQ2QI47 Gm44164-201ENSMUST00000203605 2561 ntBASIC1.84□□□□□ -2.11
Ush2AQ2QI47 Mid2-203ENSMUST00000112993 5916 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
Ush2AQ2QI47 Cacna1c-207ENSMUST00000186889 13162 ntAPPRIS ALT2 TSL 1 (best) BASIC1.84□□□□□ -2.11
Ush2AQ2QI47 Kctd12b-201ENSMUST00000039424 4795 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
Ush2AQ2QI47 Gm37964-201ENSMUST00000192459 4905 ntBASIC1.84□□□□□ -2.11
Ush2AQ2QI47 Gm42486-201ENSMUST00000200369 3486 ntBASIC1.84□□□□□ -2.11
Ush2AQ2QI47 Aak1-202ENSMUST00000089519 19341 ntAPPRIS ALT2 TSL 1 (best) BASIC1.84□□□□□ -2.11
Ush2AQ2QI47 Mir542-201ENSMUST00000102186 85 ntBASIC1.84□□□□□ -2.11
Ush2AQ2QI47 Gm22939-201ENSMUST00000103958 131 ntBASIC1.84□□□□□ -2.11
Ush2AQ2QI47 Gm15844-201ENSMUST00000118016 576 ntBASIC1.84□□□□□ -2.11
Ush2AQ2QI47 Gm24441-201ENSMUST00000157235 281 ntBASIC1.84□□□□□ -2.11
Ush2AQ2QI47 Gm37781-201ENSMUST00000194773 3218 ntBASIC1.84□□□□□ -2.11
Ush2AQ2QI47 Gm18193-201ENSMUST00000210017 772 ntBASIC1.84□□□□□ -2.11
Ush2AQ2QI47 AC145736.1-201ENSMUST00000214661 479 ntBASIC1.84□□□□□ -2.11
Ush2AQ2QI47 Gm35326-201ENSMUST00000218234 1041 ntTSL 5 BASIC1.84□□□□□ -2.11
Ush2AQ2QI47 Olfr273-201ENSMUST00000051520 1059 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
Ush2AQ2QI47 Olfr1370-201ENSMUST00000058168 951 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
Ush2AQ2QI47 Olfr988-203ENSMUST00000215511 1906 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.11
Ush2AQ2QI47 Myo3a-201ENSMUST00000044749 5082 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.11
Ush2AQ2QI47 Gm12261-201ENSMUST00000117499 645 ntBASIC1.84□□□□□ -2.11
Retrieved 100 of 76,532 protein–RNA pairs in 89.3 ms