Protein–RNA interactions for Protein: Q05722

Col9a1, Collagen alpha-1(IX) chain, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1Q05722 Gm45848-201ENSMUST00000212932 1871 ntTSL 5 BASIC6.27□□□□□ -1.41
Col9a1Q05722 Cacna1e-203ENSMUST00000187541 14921 ntAPPRIS P2 TSL 1 (best) BASIC6.27□□□□□ -1.41
Col9a1Q05722 Zfp870-202ENSMUST00000228075 5222 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
Col9a1Q05722 Gm43527-201ENSMUST00000198749 3178 ntBASIC6.27□□□□□ -1.41
Col9a1Q05722 Gm44144-201ENSMUST00000203683 1960 ntBASIC6.27□□□□□ -1.41
Col9a1Q05722 Olfr716-205ENSMUST00000214819 3485 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
Col9a1Q05722 Gm46348-201ENSMUST00000222917 2151 ntTSL 5 BASIC6.27□□□□□ -1.41
Col9a1Q05722 Gabrg2-203ENSMUST00000109290 2868 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Col9a1Q05722 Slc6a19-201ENSMUST00000022048 3936 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Col9a1Q05722 AC140409.2-201ENSMUST00000216936 3079 ntTSL 5 BASIC6.27□□□□□ -1.41
Col9a1Q05722 Il21-201ENSMUST00000029273 3072 ntAPPRIS P3 TSL 1 (best) BASIC6.27□□□□□ -1.41
Col9a1Q05722 Gm26514-201ENSMUST00000181087 4231 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Col9a1Q05722 9930111J21Rik1-202ENSMUST00000097494 3863 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
Col9a1Q05722 Grik2-207ENSMUST00000218823 9427 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Col9a1Q05722 Gm45902-201ENSMUST00000124331 4314 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Col9a1Q05722 Grik1-209ENSMUST00000227986 2942 ntBASIC6.26□□□□□ -1.41
Col9a1Q05722 Zc3h11a-204ENSMUST00000191896 4396 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Col9a1Q05722 Gm43229-201ENSMUST00000201812 1850 ntBASIC6.26□□□□□ -1.41
Col9a1Q05722 Mrpl1-202ENSMUST00000117766 3556 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
Col9a1Q05722 Casr-203ENSMUST00000172826 3659 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
Col9a1Q05722 Gm8750-201ENSMUST00000173278 1537 ntBASIC6.26□□□□□ -1.41
Col9a1Q05722 Gm45073-201ENSMUST00000207688 4247 ntBASIC6.26□□□□□ -1.41
Col9a1Q05722 Clrn1-202ENSMUST00000055636 3083 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Col9a1Q05722 Peak1-204ENSMUST00000188142 7524 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
Col9a1Q05722 BC051142-202ENSMUST00000097348 1732 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
Col9a1Q05722 Gm32122-201ENSMUST00000212119 2259 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Col9a1Q05722 Gm8595-201ENSMUST00000118250 630 ntBASIC6.26□□□□□ -1.41
Col9a1Q05722 Gm6969-201ENSMUST00000140065 342 ntBASIC6.26□□□□□ -1.41
Col9a1Q05722 Gm24060-201ENSMUST00000157494 95 ntBASIC6.26□□□□□ -1.41
Col9a1Q05722 Igkv4-53-201ENSMUST00000166380 292 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
Col9a1Q05722 Vmn1r-ps40-201ENSMUST00000172862 343 ntBASIC6.26□□□□□ -1.41
Col9a1Q05722 Gm29065-201ENSMUST00000188786 487 ntTSL 3 BASIC6.26□□□□□ -1.41
Col9a1Q05722 Gm17916-203ENSMUST00000189918 324 ntTSL 5 BASIC6.26□□□□□ -1.41
Col9a1Q05722 Gm28271-201ENSMUST00000191369 351 ntTSL 3 BASIC6.26□□□□□ -1.41
Col9a1Q05722 Gm42855-201ENSMUST00000197388 253 ntBASIC6.26□□□□□ -1.41
Col9a1Q05722 Gm32754-201ENSMUST00000199442 257 ntTSL 5 BASIC6.26□□□□□ -1.41
Col9a1Q05722 Gm42459-201ENSMUST00000199679 742 ntBASIC6.26□□□□□ -1.41
Col9a1Q05722 Gm45403-201ENSMUST00000209453 276 ntBASIC6.26□□□□□ -1.41
Col9a1Q05722 AC123944.2-201ENSMUST00000215290 382 ntBASIC6.26□□□□□ -1.41
Col9a1Q05722 Gm18188-201ENSMUST00000219386 478 ntBASIC6.26□□□□□ -1.41
Col9a1Q05722 Gm25755-201ENSMUST00000083396 107 ntBASIC6.26□□□□□ -1.41
Col9a1Q05722 Gm38416-201ENSMUST00000209648 3565 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Col9a1Q05722 AW046200-203ENSMUST00000211787 2479 ntBASIC6.26□□□□□ -1.41
Col9a1Q05722 Vmn2r33-201ENSMUST00000165921 2586 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
Col9a1Q05722 Glce-203ENSMUST00000185675 4850 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Col9a1Q05722 Elmod2-201ENSMUST00000053902 4319 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Col9a1Q05722 Dapp1-203ENSMUST00000136613 2950 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Col9a1Q05722 Gm33326-201ENSMUST00000209741 3815 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Col9a1Q05722 Ube2v2-203ENSMUST00000115777 4207 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Col9a1Q05722 Cnga1-201ENSMUST00000087213 2739 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Col9a1Q05722 Gm6820-201ENSMUST00000188803 2173 ntBASIC6.25□□□□□ -1.41
Col9a1Q05722 Olfr1364-203ENSMUST00000213912 3119 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
Col9a1Q05722 Gm42577-201ENSMUST00000201367 3211 ntBASIC6.25□□□□□ -1.41
Col9a1Q05722 1700129L04Rik-202ENSMUST00000189291 1401 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Col9a1Q05722 Unc13b-216ENSMUST00000207708 6574 ntTSL 5 BASIC6.25□□□□□ -1.41
Col9a1Q05722 Vmn2r73-201ENSMUST00000077478 2556 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
Col9a1Q05722 AC135669.2-201ENSMUST00000215636 4958 ntBASIC6.25□□□□□ -1.41
Col9a1Q05722 Gm16142-201ENSMUST00000130584 2850 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Col9a1Q05722 Cfap221-202ENSMUST00000174370 2871 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
Col9a1Q05722 Gm36298-201ENSMUST00000223394 1732 ntBASIC6.25□□□□□ -1.41
Col9a1Q05722 Elavl4-201ENSMUST00000102722 4107 ntAPPRIS P3 TSL 1 (best) BASIC6.25□□□□□ -1.41
Col9a1Q05722 Elavl4-203ENSMUST00000106597 4149 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Col9a1Q05722 Med12-201ENSMUST00000087948 6809 ntAPPRIS P2 TSL 1 (best) BASIC6.25□□□□□ -1.41
Col9a1Q05722 Mef2c-227ENSMUST00000199432 3498 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Col9a1Q05722 Psg17-201ENSMUST00000004655 2100 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Col9a1Q05722 Myot-201ENSMUST00000025349 2209 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Col9a1Q05722 Actl11-201ENSMUST00000085073 3993 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
Col9a1Q05722 Golph3l-207ENSMUST00000177390 2836 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Col9a1Q05722 Gm15638-203ENSMUST00000154775 2945 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Col9a1Q05722 AU020206-202ENSMUST00000206358 3009 ntBASIC6.25□□□□□ -1.41
Col9a1Q05722 Olfr332-201ENSMUST00000180165 3426 ntAPPRIS P1 TSL 2 BASIC6.25□□□□□ -1.41
Col9a1Q05722 Zfa-ps-202ENSMUST00000180673 3420 ntBASIC6.25□□□□□ -1.41
Col9a1Q05722 Igkv4-63-201ENSMUST00000103351 286 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
Col9a1Q05722 Gm15846-201ENSMUST00000116022 320 ntBASIC6.25□□□□□ -1.41
Col9a1Q05722 Gm13903-201ENSMUST00000120945 193 ntBASIC6.25□□□□□ -1.41
Col9a1Q05722 Gm26479-201ENSMUST00000122620 106 ntBASIC6.25□□□□□ -1.41
Col9a1Q05722 Gm28020-201ENSMUST00000157739 67 ntBASIC6.25□□□□□ -1.41
Col9a1Q05722 Gm22384-201ENSMUST00000158187 104 ntBASIC6.25□□□□□ -1.41
Col9a1Q05722 Isx-202ENSMUST00000174427 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
Col9a1Q05722 BC035044-202ENSMUST00000178918 466 ntAPPRIS ALT2 TSL 2 BASIC6.25□□□□□ -1.41
Col9a1Q05722 Gm5329-201ENSMUST00000186898 463 ntBASIC6.25□□□□□ -1.41
Col9a1Q05722 Gm28920-201ENSMUST00000189957 699 ntBASIC6.25□□□□□ -1.41
Col9a1Q05722 Gm28792-201ENSMUST00000191482 419 ntTSL 3 BASIC6.25□□□□□ -1.41
Col9a1Q05722 Gm38080-201ENSMUST00000194035 268 ntBASIC6.25□□□□□ -1.41
Col9a1Q05722 Gm42643-201ENSMUST00000200504 279 ntBASIC6.25□□□□□ -1.41
Col9a1Q05722 Gm34224-201ENSMUST00000204606 364 ntBASIC6.25□□□□□ -1.41
Col9a1Q05722 Gm2607-201ENSMUST00000212389 627 ntBASIC6.25□□□□□ -1.41
Col9a1Q05722 AC121599.1-201ENSMUST00000224276 449 ntBASIC6.25□□□□□ -1.41
Col9a1Q05722 Gm26446-201ENSMUST00000082455 103 ntBASIC6.25□□□□□ -1.41
Col9a1Q05722 Zfp263-207ENSMUST00000162207 2452 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Col9a1Q05722 Zrsr1-201ENSMUST00000049506 3282 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
Col9a1Q05722 Atp2b4-207ENSMUST00000165602 8101 ntAPPRIS P3 TSL 1 (best) BASIC6.25□□□□□ -1.41
Col9a1Q05722 Patj-204ENSMUST00000107029 4342 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Col9a1Q05722 F2rl2-201ENSMUST00000022182 2502 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Col9a1Q05722 Ipcef1-203ENSMUST00000105617 6041 ntAPPRIS P3 TSL 5 BASIC6.24□□□□□ -1.41
Col9a1Q05722 Gm37653-201ENSMUST00000195401 3578 ntBASIC6.24□□□□□ -1.41
Col9a1Q05722 Zc2hc1a-201ENSMUST00000051064 3292 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Col9a1Q05722 Clasp1-204ENSMUST00000178710 7566 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
Col9a1Q05722 Gm14120-201ENSMUST00000129067 2869 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Col9a1Q05722 Dpy19l1-201ENSMUST00000115277 4747 ntTSL 2 BASIC6.24□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 80.2 ms