Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Gm15340-201ENSMUST00000144984 704 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
Col8a1Q00780 Gm25827-201ENSMUST00000157089 107 ntBASIC4.63□□□□□ -1.67
Col8a1Q00780 Scarna13-201ENSMUST00000158164 275 ntBASIC4.63□□□□□ -1.67
Col8a1Q00780 Gm16038-201ENSMUST00000159317 193 ntBASIC4.63□□□□□ -1.67
Col8a1Q00780 0610040B10Rik-201ENSMUST00000160231 501 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
Col8a1Q00780 Calml4-202ENSMUST00000163820 699 ntTSL 2 BASIC4.63□□□□□ -1.67
Col8a1Q00780 Cfap54-204ENSMUST00000164979 945 ntTSL 5 BASIC4.63□□□□□ -1.67
Col8a1Q00780 Vmn2r-ps67-201ENSMUST00000172624 385 ntBASIC4.63□□□□□ -1.67
Col8a1Q00780 Gm24103-201ENSMUST00000174930 77 ntBASIC4.63□□□□□ -1.67
Col8a1Q00780 Gm23162-201ENSMUST00000175081 121 ntBASIC4.63□□□□□ -1.67
Col8a1Q00780 Gm19206-201ENSMUST00000186401 827 ntBASIC4.63□□□□□ -1.67
Col8a1Q00780 Gm9569-201ENSMUST00000187492 787 ntBASIC4.63□□□□□ -1.67
Col8a1Q00780 Gm28951-201ENSMUST00000190742 313 ntBASIC4.63□□□□□ -1.67
Col8a1Q00780 Gm43541-201ENSMUST00000197208 581 ntBASIC4.63□□□□□ -1.67
Col8a1Q00780 Olfr436-ps1-201ENSMUST00000203108 284 ntBASIC4.63□□□□□ -1.67
Col8a1Q00780 1700065L07Rik-201ENSMUST00000204961 614 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
Col8a1Q00780 Gm44580-201ENSMUST00000206333 877 ntBASIC4.63□□□□□ -1.67
Col8a1Q00780 Klk1b23-ps-201ENSMUST00000206347 345 ntBASIC4.63□□□□□ -1.67
Col8a1Q00780 Gm44776-201ENSMUST00000207212 381 ntBASIC4.63□□□□□ -1.67
Col8a1Q00780 Gm45305-201ENSMUST00000209799 815 ntTSL 5 BASIC4.63□□□□□ -1.67
Col8a1Q00780 Gm45870-201ENSMUST00000211269 601 ntBASIC4.63□□□□□ -1.67
Col8a1Q00780 Gm18541-201ENSMUST00000215935 538 ntBASIC4.63□□□□□ -1.67
Col8a1Q00780 AC123064.1-201ENSMUST00000218950 406 ntBASIC4.63□□□□□ -1.67
Col8a1Q00780 Vmn2r-ps92-201ENSMUST00000220242 388 ntBASIC4.63□□□□□ -1.67
Col8a1Q00780 Prl-203ENSMUST00000224228 888 ntAPPRIS ALT2 BASIC4.63□□□□□ -1.67
Col8a1Q00780 AC158982.2-201ENSMUST00000226283 184 ntBASIC4.63□□□□□ -1.67
Col8a1Q00780 AC154598.1-201ENSMUST00000227079 347 ntBASIC4.63□□□□□ -1.67
Col8a1Q00780 AC154467.1-201ENSMUST00000227527 449 ntBASIC4.63□□□□□ -1.67
Col8a1Q00780 AC139350.4-201ENSMUST00000228483 798 ntBASIC4.63□□□□□ -1.67
Col8a1Q00780 Olfr853-201ENSMUST00000058296 918 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
Col8a1Q00780 Dnah12-202ENSMUST00000073309 611 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
Col8a1Q00780 Olfr746-201ENSMUST00000080616 945 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
Col8a1Q00780 Gm25139-201ENSMUST00000083247 210 ntBASIC4.63□□□□□ -1.67
Col8a1Q00780 Snord38a-201ENSMUST00000083746 71 ntBASIC4.63□□□□□ -1.67
Col8a1Q00780 Olfr221-205ENSMUST00000216907 2859 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
Col8a1Q00780 Vmn1r6-203ENSMUST00000227131 8330 ntAPPRIS P2 BASIC4.63□□□□□ -1.67
Col8a1Q00780 Zp3r-202ENSMUST00000128128 1926 ntAPPRIS ALT2 TSL 5 BASIC4.63□□□□□ -1.67
Col8a1Q00780 Slc5a3-201ENSMUST00000113975 10913 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Col8a1Q00780 Gm16579-201ENSMUST00000161985 2566 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
Col8a1Q00780 Gm42508-201ENSMUST00000199972 3292 ntBASIC4.63□□□□□ -1.67
Col8a1Q00780 Zpld1-202ENSMUST00000143914 2697 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Col8a1Q00780 Lrp2bp-203ENSMUST00000110381 3421 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Col8a1Q00780 Rc3h1-201ENSMUST00000035911 3476 ntAPPRIS ALT2 TSL 5 BASIC4.63□□□□□ -1.67
Col8a1Q00780 Tmem67-201ENSMUST00000050686 3456 ntAPPRIS P2 TSL 1 (best) BASIC4.63□□□□□ -1.67
Col8a1Q00780 Gm15583-201ENSMUST00000116191 3510 ntBASIC4.63□□□□□ -1.67
Col8a1Q00780 Enpp3-201ENSMUST00000020169 4253 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Col8a1Q00780 Olfr827-202ENSMUST00000213568 8457 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
Col8a1Q00780 Gm14325-203ENSMUST00000188914 1494 ntTSL 5 BASIC4.62□□□□□ -1.67
Col8a1Q00780 Zfp873-201ENSMUST00000105313 1893 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
Col8a1Q00780 Gm42520-201ENSMUST00000199642 1502 ntBASIC4.62□□□□□ -1.67
Col8a1Q00780 4930444F02Rik-201ENSMUST00000215429 6871 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
Col8a1Q00780 Gm37174-201ENSMUST00000194699 3058 ntBASIC4.62□□□□□ -1.67
Col8a1Q00780 Olfr984-203ENSMUST00000214856 5025 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
Col8a1Q00780 Olfr430-202ENSMUST00000213425 3873 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
Col8a1Q00780 Olfr1443-201ENSMUST00000049724 4343 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
Col8a1Q00780 Gm20287-201ENSMUST00000172848 2367 ntBASIC4.62□□□□□ -1.67
Col8a1Q00780 S100pbp-201ENSMUST00000049081 2769 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
Col8a1Q00780 BC048559-202ENSMUST00000215667 3561 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
Col8a1Q00780 Serpinb3a-201ENSMUST00000027567 1620 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
Col8a1Q00780 Depdc1a-203ENSMUST00000120272 3323 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
Col8a1Q00780 Gm13544-201ENSMUST00000131189 2940 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
Col8a1Q00780 Gm3616-201ENSMUST00000174430 2514 ntBASIC4.62□□□□□ -1.67
Col8a1Q00780 Gm3683-201ENSMUST00000175701 2513 ntBASIC4.62□□□□□ -1.67
Col8a1Q00780 Olfr1260-202ENSMUST00000111512 4226 ntAPPRIS P1 TSL 2 BASIC4.62□□□□□ -1.67
Col8a1Q00780 Gm22020-201ENSMUST00000104358 136 ntBASIC4.62□□□□□ -1.67
Col8a1Q00780 Ppih-202ENSMUST00000106317 613 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
Col8a1Q00780 Gm23988-201ENSMUST00000117034 122 ntBASIC4.62□□□□□ -1.67
Col8a1Q00780 Gm14558-201ENSMUST00000117458 381 ntBASIC4.62□□□□□ -1.67
Col8a1Q00780 Gm11774-201ENSMUST00000118601 293 ntBASIC4.62□□□□□ -1.67
Col8a1Q00780 Gm12237-201ENSMUST00000120158 470 ntBASIC4.62□□□□□ -1.67
Col8a1Q00780 Rps11-ps2-201ENSMUST00000121547 456 ntBASIC4.62□□□□□ -1.67
Col8a1Q00780 Gm13149-201ENSMUST00000122071 339 ntBASIC4.62□□□□□ -1.67
Col8a1Q00780 Gm16212-202ENSMUST00000143555 420 ntTSL 3 BASIC4.62□□□□□ -1.67
Col8a1Q00780 Gm12114-201ENSMUST00000147896 656 ntTSL 3 BASIC4.62□□□□□ -1.67
Col8a1Q00780 Gm12602-202ENSMUST00000154352 707 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
Col8a1Q00780 Airn-203ENSMUST00000159791 485 ntTSL 3 BASIC4.62□□□□□ -1.67
Col8a1Q00780 Fcf1-202ENSMUST00000171040 731 ntTSL 3 BASIC4.62□□□□□ -1.67
Col8a1Q00780 Mir5106-201ENSMUST00000174936 73 ntBASIC4.62□□□□□ -1.67
Col8a1Q00780 Gm20656-201ENSMUST00000176925 518 ntBASIC4.62□□□□□ -1.67
Col8a1Q00780 Gm25670-201ENSMUST00000178423 107 ntBASIC4.62□□□□□ -1.67
Col8a1Q00780 Gm26239-201ENSMUST00000178842 107 ntBASIC4.62□□□□□ -1.67
Col8a1Q00780 Gm24267-201ENSMUST00000179841 107 ntBASIC4.62□□□□□ -1.67
Col8a1Q00780 Gm29134-201ENSMUST00000186579 126 ntBASIC4.62□□□□□ -1.67
Col8a1Q00780 Gm28241-201ENSMUST00000190916 235 ntBASIC4.62□□□□□ -1.67
Col8a1Q00780 Gm37485-201ENSMUST00000192326 2953 ntBASIC4.62□□□□□ -1.67
Col8a1Q00780 Ighv8-5-201ENSMUST00000194257 358 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
Col8a1Q00780 Gm17781-201ENSMUST00000195232 649 ntBASIC4.62□□□□□ -1.67
Col8a1Q00780 Ighv12-1-201ENSMUST00000195542 329 ntBASIC4.62□□□□□ -1.67
Col8a1Q00780 Gm43470-202ENSMUST00000198573 227 ntTSL 3 BASIC4.62□□□□□ -1.67
Col8a1Q00780 Gm17780-201ENSMUST00000207142 612 ntBASIC4.62□□□□□ -1.67
Col8a1Q00780 Ifitm6-203ENSMUST00000211330 813 ntAPPRIS ALT2 TSL 2 BASIC4.62□□□□□ -1.67
Col8a1Q00780 Gm18924-201ENSMUST00000211929 316 ntBASIC4.62□□□□□ -1.67
Col8a1Q00780 AC159809.1-201ENSMUST00000216235 520 ntTSL 5 BASIC4.62□□□□□ -1.67
Col8a1Q00780 AC159619.1-201ENSMUST00000219118 318 ntTSL 5 BASIC4.62□□□□□ -1.67
Col8a1Q00780 AC166358.10-201ENSMUST00000220556 144 ntBASIC4.62□□□□□ -1.67
Col8a1Q00780 AC154472.2-201ENSMUST00000221186 288 ntTSL 5 BASIC4.62□□□□□ -1.67
Col8a1Q00780 AC156576.2-202ENSMUST00000222525 411 ntBASIC4.62□□□□□ -1.67
Col8a1Q00780 Olfr748-201ENSMUST00000073561 924 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
Col8a1Q00780 Gm24292-201ENSMUST00000082888 107 ntBASIC4.62□□□□□ -1.67
Col8a1Q00780 Gm23678-201ENSMUST00000083157 107 ntBASIC4.62□□□□□ -1.67
Retrieved 100 of 76,532 protein–RNA pairs in 66.3 ms