Protein–RNA interactions for Protein: P97952

Scn1b, Sodium channel subunit beta-1, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1bP97952 Gm29315-201ENSMUST00000185844 622 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
Scn1bP97952 Gm29581-201ENSMUST00000186083 622 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
Scn1bP97952 Gm29210-201ENSMUST00000186332 622 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
Scn1bP97952 Gm28761-201ENSMUST00000186540 622 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
Scn1bP97952 Gm28170-201ENSMUST00000186892 622 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
Scn1bP97952 Gm28073-201ENSMUST00000187174 622 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
Scn1bP97952 Gm28725-201ENSMUST00000187372 622 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
Scn1bP97952 Gm29655-201ENSMUST00000187728 622 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
Scn1bP97952 Mrgprb1-202ENSMUST00000188095 472 ntTSL 3 BASIC3.97□□□□□ -1.77
Scn1bP97952 Gm28280-201ENSMUST00000188196 622 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
Scn1bP97952 Gm28091-201ENSMUST00000188421 622 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
Scn1bP97952 Gm28486-201ENSMUST00000188443 621 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
Scn1bP97952 Gm28697-202ENSMUST00000188821 622 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
Scn1bP97952 Gm28521-201ENSMUST00000188948 622 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
Scn1bP97952 Gm28543-201ENSMUST00000188986 509 ntTSL 5 BASIC3.97□□□□□ -1.77
Scn1bP97952 Gm28300-202ENSMUST00000189170 622 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
Scn1bP97952 Gm28690-202ENSMUST00000190325 622 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
Scn1bP97952 Gm28456-202ENSMUST00000190521 622 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
Scn1bP97952 Gm28325-202ENSMUST00000191481 622 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
Scn1bP97952 4933401J01Rik-201ENSMUST00000193812 1070 ntBASIC3.97□□□□□ -1.77
Scn1bP97952 Gm36467-202ENSMUST00000195606 622 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
Scn1bP97952 Gm5552-201ENSMUST00000197149 515 ntBASIC3.97□□□□□ -1.77
Scn1bP97952 Rps27-206ENSMUST00000197361 329 ntTSL 3 BASIC3.97□□□□□ -1.77
Scn1bP97952 Igkv12-66-201ENSMUST00000199305 348 ntBASIC3.97□□□□□ -1.77
Scn1bP97952 Gm43975-201ENSMUST00000203023 481 ntBASIC3.97□□□□□ -1.77
Scn1bP97952 Gm44054-201ENSMUST00000203814 372 ntBASIC3.97□□□□□ -1.77
Scn1bP97952 Olfr1266-ps1-201ENSMUST00000214850 180 ntBASIC3.97□□□□□ -1.77
Scn1bP97952 Gm18225-201ENSMUST00000216708 742 ntBASIC3.97□□□□□ -1.77
Scn1bP97952 Gm4052-201ENSMUST00000220890 451 ntBASIC3.97□□□□□ -1.77
Scn1bP97952 1700112M02Rik-201ENSMUST00000221719 348 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
Scn1bP97952 AC156560.3-201ENSMUST00000222978 3841 ntBASIC3.97□□□□□ -1.77
Scn1bP97952 AC117797.2-201ENSMUST00000224419 531 ntBASIC3.97□□□□□ -1.77
Scn1bP97952 AC124549.1-201ENSMUST00000225912 333 ntBASIC3.97□□□□□ -1.77
Scn1bP97952 AC119573.1-201ENSMUST00000227960 757 ntBASIC3.97□□□□□ -1.77
Scn1bP97952 AC133910.1-201ENSMUST00000228128 624 ntBASIC3.97□□□□□ -1.77
Scn1bP97952 Tipin-201ENSMUST00000034964 1211 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
Scn1bP97952 Snord15b-201ENSMUST00000083032 145 ntBASIC3.97□□□□□ -1.77
Scn1bP97952 Vmn2r-ps45-201ENSMUST00000174138 2435 ntBASIC3.97□□□□□ -1.77
Scn1bP97952 Olfr726-203ENSMUST00000213345 1728 ntAPPRIS P1 TSL 2 BASIC3.97□□□□□ -1.77
Scn1bP97952 Hsfy2-201ENSMUST00000062085 1392 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
Scn1bP97952 Cpxcr1-201ENSMUST00000101269 1596 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
Scn1bP97952 Slfn9-202ENSMUST00000092840 3862 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.77
Scn1bP97952 Wdr49-203ENSMUST00000204341 1344 ntTSL 5 BASIC3.96□□□□□ -1.77
Scn1bP97952 AC120153.1-201ENSMUST00000226502 1311 ntBASIC3.96□□□□□ -1.77
Scn1bP97952 Olfr944-203ENSMUST00000215306 1523 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
Scn1bP97952 Gm37498-201ENSMUST00000193524 4002 ntBASIC3.96□□□□□ -1.78
Scn1bP97952 AC151831.1-201ENSMUST00000227609 4033 ntBASIC3.96□□□□□ -1.78
Scn1bP97952 Stk31-204ENSMUST00000172459 2922 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.78
Scn1bP97952 Gm16892-201ENSMUST00000180999 1726 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
Scn1bP97952 Zfp595-201ENSMUST00000109735 3896 ntAPPRIS P2 TSL 1 (best) BASIC3.96□□□□□ -1.78
Scn1bP97952 Gm37626-201ENSMUST00000194332 4563 ntBASIC3.96□□□□□ -1.78
Scn1bP97952 Trappc1-203ENSMUST00000102602 751 ntAPPRIS P1 TSL 2 BASIC3.96□□□□□ -1.78
Scn1bP97952 Igkv8-19-201ENSMUST00000103389 305 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
Scn1bP97952 Igkv3-2-201ENSMUST00000103403 378 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
Scn1bP97952 Gm26067-201ENSMUST00000103789 110 ntBASIC3.96□□□□□ -1.78
Scn1bP97952 Prl2c1-202ENSMUST00000110335 852 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.78
Scn1bP97952 Gm15087-201ENSMUST00000117465 1172 ntBASIC3.96□□□□□ -1.78
Scn1bP97952 Gm13273-201ENSMUST00000119737 159 ntBASIC3.96□□□□□ -1.78
Scn1bP97952 Mup-ps18-201ENSMUST00000120145 531 ntBASIC3.96□□□□□ -1.78
Scn1bP97952 Gm13865-201ENSMUST00000120957 865 ntBASIC3.96□□□□□ -1.78
Scn1bP97952 Gm6591-201ENSMUST00000121063 434 ntBASIC3.96□□□□□ -1.78
Scn1bP97952 Gm13502-201ENSMUST00000121574 684 ntBASIC3.96□□□□□ -1.78
Scn1bP97952 Gm16365-204ENSMUST00000143877 779 ntTSL 2 BASIC3.96□□□□□ -1.78
Scn1bP97952 Gm14011-201ENSMUST00000145178 302 ntTSL 2 BASIC3.96□□□□□ -1.78
Scn1bP97952 Gm11579-201ENSMUST00000145502 845 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
Scn1bP97952 Gm16345-201ENSMUST00000146065 158 ntBASIC3.96□□□□□ -1.78
Scn1bP97952 Gm23754-201ENSMUST00000157576 63 ntBASIC3.96□□□□□ -1.78
Scn1bP97952 Gm23312-201ENSMUST00000158774 102 ntBASIC3.96□□□□□ -1.78
Scn1bP97952 Gm16213-201ENSMUST00000160076 639 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
Scn1bP97952 Gm17109-201ENSMUST00000163985 358 ntBASIC3.96□□□□□ -1.78
Scn1bP97952 Taf1d-202ENSMUST00000164079 1005 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.78
Scn1bP97952 Vmn1r-ps84-201ENSMUST00000172853 923 ntBASIC3.96□□□□□ -1.78
Scn1bP97952 1700116B05Rik-201ENSMUST00000173461 414 ntTSL 2 BASIC3.96□□□□□ -1.78
Scn1bP97952 Mir5110-201ENSMUST00000175537 87 ntBASIC3.96□□□□□ -1.78
Scn1bP97952 Gm20777-201ENSMUST00000177818 699 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
Scn1bP97952 Gm21874-201ENSMUST00000178374 699 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
Scn1bP97952 Gm20873-201ENSMUST00000179410 699 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
Scn1bP97952 Gm20737-201ENSMUST00000179665 699 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
Scn1bP97952 Gm21310-201ENSMUST00000180130 699 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
Scn1bP97952 Gm21425-201ENSMUST00000180318 699 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
Scn1bP97952 Gm28847-201ENSMUST00000186778 700 ntBASIC3.96□□□□□ -1.78
Scn1bP97952 1810007C17Rik-201ENSMUST00000187665 710 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
Scn1bP97952 2610044O15Rik8-203ENSMUST00000188757 413 ntTSL 2 BASIC3.96□□□□□ -1.78
Scn1bP97952 Gm29365-201ENSMUST00000189461 699 ntBASIC3.96□□□□□ -1.78
Scn1bP97952 Gm37815-201ENSMUST00000195665 411 ntTSL 5 BASIC3.96□□□□□ -1.78
Scn1bP97952 Gm35570-201ENSMUST00000198730 681 ntBASIC3.96□□□□□ -1.78
Scn1bP97952 Gm43116-201ENSMUST00000199789 195 ntBASIC3.96□□□□□ -1.78
Scn1bP97952 Igkv13-82-201ENSMUST00000200308 346 ntBASIC3.96□□□□□ -1.78
Scn1bP97952 Gm8774-201ENSMUST00000203621 692 ntBASIC3.96□□□□□ -1.78
Scn1bP97952 AC156504.1-201ENSMUST00000214608 157 ntBASIC3.96□□□□□ -1.78
Scn1bP97952 CAAA01216754.6-201ENSMUST00000217183 398 ntTSL 5 BASIC3.96□□□□□ -1.78
Scn1bP97952 AC154635.1-201ENSMUST00000221433 400 ntTSL 3 BASIC3.96□□□□□ -1.78
Scn1bP97952 Olfr866-201ENSMUST00000062248 1077 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
Scn1bP97952 n-R5s168-201ENSMUST00000083948 104 ntBASIC3.96□□□□□ -1.78
Scn1bP97952 Olfr876-201ENSMUST00000086064 1048 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
Scn1bP97952 Gm44708-201ENSMUST00000205580 2237 ntBASIC3.96□□□□□ -1.78
Scn1bP97952 Ptgs2-201ENSMUST00000035065 4453 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
Scn1bP97952 Olfr1101-202ENSMUST00000214411 3235 ntAPPRIS P1 TSL 3 BASIC3.96□□□□□ -1.78
Scn1bP97952 Gm44847-201ENSMUST00000207104 1991 ntBASIC3.96□□□□□ -1.78
Scn1bP97952 Cfh-203ENSMUST00000111977 4100 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.78
Retrieved 100 of 76,532 protein–RNA pairs in 88.5 ms