Protein–RNA interactions for Protein: P84244

H3f3a, Histone H3.3, mousemouse

Known RBP Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3aP84244 Ssx9-201ENSMUST00000103001 602 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
H3f3aP84244 Olfr616-201ENSMUST00000106886 954 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
H3f3aP84244 Gm11372-201ENSMUST00000117348 570 ntBASIC3.3□□□□□ -1.88
H3f3aP84244 Gm14890-201ENSMUST00000117660 676 ntBASIC3.3□□□□□ -1.88
H3f3aP84244 Gm12427-201ENSMUST00000117719 302 ntBASIC3.3□□□□□ -1.88
H3f3aP84244 Gm14991-201ENSMUST00000119913 598 ntBASIC3.3□□□□□ -1.88
H3f3aP84244 Sult1b1-203ENSMUST00000120150 1213 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
H3f3aP84244 Gm15263-201ENSMUST00000121556 642 ntBASIC3.3□□□□□ -1.88
H3f3aP84244 Smt3h2-ps4-201ENSMUST00000121569 288 ntBASIC3.3□□□□□ -1.88
H3f3aP84244 Gm15533-201ENSMUST00000126205 465 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
H3f3aP84244 Gm23782-201ENSMUST00000157939 120 ntBASIC3.3□□□□□ -1.88
H3f3aP84244 Vmn1r-ps40-201ENSMUST00000172862 343 ntBASIC3.3□□□□□ -1.88
H3f3aP84244 Mir5710-201ENSMUST00000176884 69 ntBASIC3.3□□□□□ -1.88
H3f3aP84244 Gm37343-201ENSMUST00000192542 111 ntBASIC3.3□□□□□ -1.88
H3f3aP84244 Gm18429-201ENSMUST00000198707 421 ntBASIC3.3□□□□□ -1.88
H3f3aP84244 Gm4859-201ENSMUST00000199625 787 ntBASIC3.3□□□□□ -1.88
H3f3aP84244 Gm44864-201ENSMUST00000207292 505 ntTSL 2 BASIC3.3□□□□□ -1.88
H3f3aP84244 Gm45608-201ENSMUST00000210948 389 ntBASIC3.3□□□□□ -1.88
H3f3aP84244 AC123835.1-201ENSMUST00000214362 670 ntBASIC3.3□□□□□ -1.88
H3f3aP84244 Slfn5os-202ENSMUST00000216469 550 ntTSL 5 BASIC3.3□□□□□ -1.88
H3f3aP84244 Gm18387-201ENSMUST00000220333 702 ntBASIC3.3□□□□□ -1.88
H3f3aP84244 AC125379.1-201ENSMUST00000221928 111 ntBASIC3.3□□□□□ -1.88
H3f3aP84244 AC140344.1-201ENSMUST00000223384 387 ntBASIC3.3□□□□□ -1.88
H3f3aP84244 AC124562.1-201ENSMUST00000224673 337 ntBASIC3.3□□□□□ -1.88
H3f3aP84244 AC140209.1-201ENSMUST00000227875 284 ntBASIC3.3□□□□□ -1.88
H3f3aP84244 AC130673.2-201ENSMUST00000228091 797 ntBASIC3.3□□□□□ -1.88
H3f3aP84244 Klra7-202ENSMUST00000049304 1075 ntAPPRIS P3 TSL 1 (best) BASIC3.3□□□□□ -1.88
H3f3aP84244 Gm6462-201ENSMUST00000081488 304 ntBASIC3.3□□□□□ -1.88
H3f3aP84244 Olfr767-201ENSMUST00000082131 1086 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
H3f3aP84244 Mir133a-2-201ENSMUST00000083526 104 ntBASIC3.3□□□□□ -1.88
H3f3aP84244 Snord15a-201ENSMUST00000083888 148 ntBASIC3.3□□□□□ -1.88
H3f3aP84244 Vmn1r81-201ENSMUST00000086232 921 ntAPPRIS P2 BASIC3.3□□□□□ -1.88
H3f3aP84244 Hfm1-202ENSMUST00000117588 4870 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
H3f3aP84244 Gm45848-201ENSMUST00000212932 1871 ntTSL 5 BASIC3.3□□□□□ -1.88
H3f3aP84244 Gm13762-201ENSMUST00000144908 2612 ntAPPRIS P1 TSL 3 BASIC3.29□□□□□ -1.88
H3f3aP84244 Gm6760-201ENSMUST00000114682 604 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
H3f3aP84244 Gm11869-201ENSMUST00000118701 329 ntBASIC3.29□□□□□ -1.88
H3f3aP84244 Gm14788-201ENSMUST00000119457 375 ntBASIC3.29□□□□□ -1.88
H3f3aP84244 Olfr1001-ps1-201ENSMUST00000121340 945 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
H3f3aP84244 n-R5s68-201ENSMUST00000122639 82 ntBASIC3.29□□□□□ -1.88
H3f3aP84244 Hba-ps4-201ENSMUST00000128900 447 ntBASIC3.29□□□□□ -1.88
H3f3aP84244 Gm26276-201ENSMUST00000157099 109 ntBASIC3.29□□□□□ -1.88
H3f3aP84244 Gm24745-201ENSMUST00000157840 85 ntBASIC3.29□□□□□ -1.88
H3f3aP84244 Gm22254-201ENSMUST00000179186 110 ntBASIC3.29□□□□□ -1.88
H3f3aP84244 Spin2e-201ENSMUST00000179716 705 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
H3f3aP84244 Gm38332-201ENSMUST00000194189 147 ntBASIC3.29□□□□□ -1.88
H3f3aP84244 1700047N06Rik-201ENSMUST00000194474 920 ntBASIC3.29□□□□□ -1.88
H3f3aP84244 Gm43476-201ENSMUST00000197873 405 ntBASIC3.29□□□□□ -1.88
H3f3aP84244 5033403H07Rik-203ENSMUST00000198580 467 ntTSL 2 BASIC3.29□□□□□ -1.88
H3f3aP84244 Gm43651-201ENSMUST00000199796 439 ntBASIC3.29□□□□□ -1.88
H3f3aP84244 Gm7041-201ENSMUST00000201227 524 ntBASIC3.29□□□□□ -1.88
H3f3aP84244 Gm44134-201ENSMUST00000203064 661 ntTSL 2 BASIC3.29□□□□□ -1.88
H3f3aP84244 Gm44748-201ENSMUST00000206040 658 ntTSL 5 BASIC3.29□□□□□ -1.88
H3f3aP84244 1700095K22Rik-201ENSMUST00000206808 282 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
H3f3aP84244 Gm44724-202ENSMUST00000208251 531 ntTSL 5 BASIC3.29□□□□□ -1.88
H3f3aP84244 Gm45539-201ENSMUST00000210313 428 ntBASIC3.29□□□□□ -1.88
H3f3aP84244 Gm45639-201ENSMUST00000211205 710 ntTSL 5 BASIC3.29□□□□□ -1.88
H3f3aP84244 Gm45830-201ENSMUST00000212945 344 ntTSL 5 BASIC3.29□□□□□ -1.88
H3f3aP84244 AC142113.2-201ENSMUST00000217425 748 ntBASIC3.29□□□□□ -1.88
H3f3aP84244 AC139638.1-201ENSMUST00000218027 364 ntBASIC3.29□□□□□ -1.88
H3f3aP84244 AC121569.2-201ENSMUST00000222557 574 ntTSL 2 BASIC3.29□□□□□ -1.88
H3f3aP84244 AC125539.1-202ENSMUST00000226449 670 ntBASIC3.29□□□□□ -1.88
H3f3aP84244 Prl8a1-201ENSMUST00000006664 864 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
H3f3aP84244 Zfp825-201ENSMUST00000074369 822 ntTSL 5 BASIC3.29□□□□□ -1.88
H3f3aP84244 Olfr1111-201ENSMUST00000099860 940 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
H3f3aP84244 Gm11823-201ENSMUST00000130582 2278 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
H3f3aP84244 Olfr988-202ENSMUST00000111597 1702 ntAPPRIS P1 TSL 3 BASIC3.29□□□□□ -1.88
H3f3aP84244 Mecom-203ENSMUST00000108271 3851 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
H3f3aP84244 Gm6902-202ENSMUST00000191169 1581 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
H3f3aP84244 Zfp945-205ENSMUST00000160457 6497 ntAPPRIS P4 TSL 1 (best) BASIC3.29□□□□□ -1.88
H3f3aP84244 Fancb-201ENSMUST00000057150 2422 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
H3f3aP84244 Gm14443-201ENSMUST00000109054 4516 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
H3f3aP84244 Dst-201ENSMUST00000097785 23251 ntAPPRIS P4 TSL 1 (best) BASIC3.29□□□□□ -1.88
H3f3aP84244 Olfr1454-203ENSMUST00000214695 4049 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
H3f3aP84244 Gm14308-203ENSMUST00000119149 1458 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
H3f3aP84244 Gm14434-202ENSMUST00000120959 1458 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
H3f3aP84244 Cd180-201ENSMUST00000022124 2650 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
H3f3aP84244 Mga-202ENSMUST00000079934 13304 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
H3f3aP84244 Gm7957-201ENSMUST00000207404 2602 ntBASIC3.28□□□□□ -1.88
H3f3aP84244 Tc2n-202ENSMUST00000160715 1386 ntTSL 5 BASIC3.28□□□□□ -1.88
H3f3aP84244 Hsfy2-201ENSMUST00000062085 1392 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
H3f3aP84244 Gm43320-201ENSMUST00000196047 2916 ntBASIC3.28□□□□□ -1.88
H3f3aP84244 Gm7470-201ENSMUST00000194219 2095 ntBASIC3.28□□□□□ -1.88
H3f3aP84244 Gm37652-201ENSMUST00000195290 2095 ntBASIC3.28□□□□□ -1.88
H3f3aP84244 Igkv3-7-201ENSMUST00000103399 299 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
H3f3aP84244 Trav7n-4-201ENSMUST00000103609 341 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
H3f3aP84244 Gm12931-201ENSMUST00000117046 324 ntBASIC3.28□□□□□ -1.88
H3f3aP84244 Gm11406-201ENSMUST00000117418 484 ntBASIC3.28□□□□□ -1.88
H3f3aP84244 Gm22480-201ENSMUST00000122568 128 ntBASIC3.28□□□□□ -1.88
H3f3aP84244 Gm11195-201ENSMUST00000135030 441 ntTSL 3 BASIC3.28□□□□□ -1.88
H3f3aP84244 Gm23959-201ENSMUST00000157208 324 ntBASIC3.28□□□□□ -1.88
H3f3aP84244 Gm23123-201ENSMUST00000157648 144 ntBASIC3.28□□□□□ -1.88
H3f3aP84244 Gm24727-201ENSMUST00000158231 144 ntBASIC3.28□□□□□ -1.88
H3f3aP84244 Gm22890-201ENSMUST00000158642 144 ntBASIC3.28□□□□□ -1.88
H3f3aP84244 Cylc2-203ENSMUST00000166749 1297 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
H3f3aP84244 Obox4-ps29-201ENSMUST00000175956 1134 ntBASIC3.28□□□□□ -1.88
H3f3aP84244 Gm20812-201ENSMUST00000179220 684 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
H3f3aP84244 Mir6926-201ENSMUST00000184562 68 ntBASIC3.28□□□□□ -1.88
H3f3aP84244 Olfr625-ps1-202ENSMUST00000190218 927 ntAPPRIS ALT2 BASIC3.28□□□□□ -1.88
H3f3aP84244 Scgb2b32-ps-201ENSMUST00000190326 337 ntBASIC3.28□□□□□ -1.88
Retrieved 100 of 76,532 protein–RNA pairs in 79.5 ms