Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Macf1-205ENSMUST00000106220 17608 ntTSL 5 BASIC4.4□□□□□ -1.7
NcanP55066 Olfr970-202ENSMUST00000213975 1630 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
NcanP55066 2310003L06Rik-201ENSMUST00000007601 1603 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
NcanP55066 Olfr1000-203ENSMUST00000216571 2028 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
NcanP55066 Gm11110-201ENSMUST00000112915 1013 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
NcanP55066 Gm15719-201ENSMUST00000120619 635 ntBASIC4.4□□□□□ -1.71
NcanP55066 Gm11446-201ENSMUST00000121319 866 ntBASIC4.4□□□□□ -1.71
NcanP55066 Gm14589-201ENSMUST00000121640 727 ntBASIC4.4□□□□□ -1.71
NcanP55066 Olfr406-201ENSMUST00000133561 1101 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
NcanP55066 Gm13180-201ENSMUST00000141222 440 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
NcanP55066 Mir1934-201ENSMUST00000158127 83 ntBASIC4.4□□□□□ -1.71
NcanP55066 Gm22158-201ENSMUST00000158411 126 ntBASIC4.4□□□□□ -1.71
NcanP55066 Gm22135-201ENSMUST00000158752 108 ntBASIC4.4□□□□□ -1.71
NcanP55066 Gm25835-201ENSMUST00000158917 144 ntBASIC4.4□□□□□ -1.71
NcanP55066 Gm16566-201ENSMUST00000160387 910 ntBASIC4.4□□□□□ -1.71
NcanP55066 Gm17727-201ENSMUST00000171898 643 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
NcanP55066 Vmn2r-ps67-201ENSMUST00000172624 385 ntBASIC4.4□□□□□ -1.71
NcanP55066 Gm8890-202ENSMUST00000177727 465 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.71
NcanP55066 Rpl31-ps21-201ENSMUST00000181182 374 ntBASIC4.4□□□□□ -1.71
NcanP55066 Olfr576-202ENSMUST00000185326 927 ntTSL 5 BASIC4.4□□□□□ -1.71
NcanP55066 Gm32391-201ENSMUST00000191839 540 ntTSL 2 BASIC4.4□□□□□ -1.71
NcanP55066 Gm9989-202ENSMUST00000193125 258 ntTSL 3 BASIC4.4□□□□□ -1.71
NcanP55066 Gm38146-201ENSMUST00000194121 1293 ntBASIC4.4□□□□□ -1.71
NcanP55066 1700126H18Rik-201ENSMUST00000201903 405 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
NcanP55066 Gm36776-201ENSMUST00000207006 203 ntBASIC4.4□□□□□ -1.71
NcanP55066 AC102815.1-201ENSMUST00000226662 1061 ntBASIC4.4□□□□□ -1.71
NcanP55066 Olfr902-201ENSMUST00000050733 1056 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
NcanP55066 Skint2-201ENSMUST00000058791 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
NcanP55066 Cd300ld2-201ENSMUST00000092463 381 ntTSL 5 BASIC4.4□□□□□ -1.71
NcanP55066 Gm22444-201ENSMUST00000093693 108 ntBASIC4.4□□□□□ -1.71
NcanP55066 Olfr1002-202ENSMUST00000215548 2295 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
NcanP55066 Olfr612-203ENSMUST00000215663 2473 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
NcanP55066 Olfr406-203ENSMUST00000217016 2651 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
NcanP55066 Olfr1450-203ENSMUST00000213925 3075 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
NcanP55066 Mmrn1-201ENSMUST00000129603 4477 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.71
NcanP55066 Vmn1r169-204ENSMUST00000227932 2745 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
NcanP55066 Vmn2r20-201ENSMUST00000172199 2562 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
NcanP55066 Olfr128-202ENSMUST00000216440 3644 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
NcanP55066 Gprc6a-201ENSMUST00000020062 2856 ntAPPRIS P2 TSL 1 (best) BASIC4.39□□□□□ -1.71
NcanP55066 Olfr107-205ENSMUST00000216844 4021 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
NcanP55066 Gm14295-202ENSMUST00000132883 2505 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
NcanP55066 Olfr476-202ENSMUST00000217173 2539 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
NcanP55066 Uhmk1-203ENSMUST00000150821 7676 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
NcanP55066 Xkr9-201ENSMUST00000088542 1926 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
NcanP55066 Gm16794-203ENSMUST00000185324 1490 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
NcanP55066 Rnf213-202ENSMUST00000131035 16716 ntAPPRIS P5 TSL 5 BASIC4.39□□□□□ -1.71
NcanP55066 Iigp1-201ENSMUST00000032473 3121 ntAPPRIS P1 TSL 3 BASIC4.39□□□□□ -1.71
NcanP55066 Trav8n-2-201ENSMUST00000103632 408 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
NcanP55066 Zfp931-202ENSMUST00000108924 962 ntAPPRIS P1 TSL 3 BASIC4.39□□□□□ -1.71
NcanP55066 Gm14399-203ENSMUST00000109059 703 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
NcanP55066 Gm14399-205ENSMUST00000109062 626 ntTSL 5 BASIC4.39□□□□□ -1.71
NcanP55066 Clec1b-203ENSMUST00000112081 614 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
NcanP55066 Gm12805-201ENSMUST00000117305 1048 ntBASIC4.39□□□□□ -1.71
NcanP55066 Gm11372-201ENSMUST00000117348 570 ntBASIC4.39□□□□□ -1.71
NcanP55066 Gm13787-201ENSMUST00000120422 168 ntBASIC4.39□□□□□ -1.71
NcanP55066 Zfp931-204ENSMUST00000131702 704 ntTSL 3 BASIC4.39□□□□□ -1.71
NcanP55066 Pfdn4-205ENSMUST00000136839 452 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
NcanP55066 Gm26214-201ENSMUST00000158581 107 ntBASIC4.39□□□□□ -1.71
NcanP55066 Gm22531-201ENSMUST00000158819 140 ntBASIC4.39□□□□□ -1.71
NcanP55066 Vmn1r181-201ENSMUST00000181796 1080 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
NcanP55066 Rian-211ENSMUST00000182737 699 ntTSL 3 BASIC4.39□□□□□ -1.71
NcanP55066 1700041C23Rik-201ENSMUST00000185243 395 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
NcanP55066 Gm36998-201ENSMUST00000193205 704 ntBASIC4.39□□□□□ -1.71
NcanP55066 Gm18900-201ENSMUST00000193218 584 ntBASIC4.39□□□□□ -1.71
NcanP55066 Gm42832-201ENSMUST00000196361 745 ntBASIC4.39□□□□□ -1.71
NcanP55066 Gm44475-201ENSMUST00000204041 424 ntBASIC4.39□□□□□ -1.71
NcanP55066 Gm45830-201ENSMUST00000212945 344 ntTSL 5 BASIC4.39□□□□□ -1.71
NcanP55066 AC122317.1-201ENSMUST00000218404 708 ntTSL 5 BASIC4.39□□□□□ -1.71
NcanP55066 AC158631.2-201ENSMUST00000219999 478 ntBASIC4.39□□□□□ -1.71
NcanP55066 AC122840.3-201ENSMUST00000221474 486 ntTSL 5 BASIC4.39□□□□□ -1.71
NcanP55066 AC115357.1-201ENSMUST00000227575 466 ntBASIC4.39□□□□□ -1.71
NcanP55066 Olfr813-201ENSMUST00000064893 933 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
NcanP55066 Mir370-201ENSMUST00000083499 79 ntBASIC4.39□□□□□ -1.71
NcanP55066 Gm10801-201ENSMUST00000099684 504 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
NcanP55066 Zfp260-202ENSMUST00000108200 3604 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
NcanP55066 Usp46-201ENSMUST00000068058 4557 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
NcanP55066 Smgc-201ENSMUST00000088555 2977 ntAPPRIS P2 TSL 1 (best) BASIC4.39□□□□□ -1.71
NcanP55066 Olfr1120-202ENSMUST00000215163 4404 ntAPPRIS P1 TSL 2 BASIC4.39□□□□□ -1.71
NcanP55066 Adgrv1-201ENSMUST00000095585 19338 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
NcanP55066 Gm36944-201ENSMUST00000192257 2759 ntBASIC4.39□□□□□ -1.71
NcanP55066 Olfr652-203ENSMUST00000216131 4773 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
NcanP55066 Vmn1r52-207ENSMUST00000228394 3069 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
NcanP55066 Vmn1r51-205ENSMUST00000227109 4214 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
NcanP55066 Kcnj1-201ENSMUST00000047334 2987 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
NcanP55066 4933436I01Rik-201ENSMUST00000026325 1426 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
NcanP55066 Dmxl2-202ENSMUST00000118600 9465 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
NcanP55066 Vmn1r209-202ENSMUST00000227038 6461 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
NcanP55066 Gm43009-201ENSMUST00000199979 3566 ntBASIC4.38□□□□□ -1.71
NcanP55066 Gm45352-201ENSMUST00000210140 1452 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
NcanP55066 Olfr577-203ENSMUST00000215237 3144 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
NcanP55066 Gm2396-202ENSMUST00000188232 3433 ntTSL 5 BASIC4.38□□□□□ -1.71
NcanP55066 Ankrd31-201ENSMUST00000207464 5146 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
NcanP55066 Pds5b-203ENSMUST00000110486 2900 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
NcanP55066 9430018G01Rik-201ENSMUST00000203260 3758 ntTSL 5 BASIC4.38□□□□□ -1.71
NcanP55066 Olfr639-202ENSMUST00000215653 6570 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
NcanP55066 4930503E14Rik-201ENSMUST00000100688 1287 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
NcanP55066 Samt2-201ENSMUST00000101137 923 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
NcanP55066 Gm11398-201ENSMUST00000120330 320 ntBASIC4.38□□□□□ -1.71
NcanP55066 Gm12900-201ENSMUST00000120919 573 ntBASIC4.38□□□□□ -1.71
NcanP55066 Gm25109-201ENSMUST00000122474 114 ntBASIC4.38□□□□□ -1.71
Retrieved 100 of 76,532 protein–RNA pairs in 72 ms