Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Rpl21-ps14-201ENSMUST00000080279 483 ntBASIC3.82□□□□□ -1.8
Sox3P53784 Gm22739-201ENSMUST00000083437 160 ntBASIC3.82□□□□□ -1.8
Sox3P53784 Gm10271-201ENSMUST00000092165 156 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
Sox3P53784 Gm22444-201ENSMUST00000093693 108 ntBASIC3.82□□□□□ -1.8
Sox3P53784 Gm43527-201ENSMUST00000198749 3178 ntBASIC3.82□□□□□ -1.8
Sox3P53784 B3galt1-201ENSMUST00000042456 2855 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
Sox3P53784 AC123705.2-201ENSMUST00000221653 2009 ntBASIC3.82□□□□□ -1.8
Sox3P53784 Olfr1355-201ENSMUST00000078414 3317 ntAPPRIS P1 TSL 2 BASIC3.82□□□□□ -1.8
Sox3P53784 Gpr34-202ENSMUST00000096492 1898 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
Sox3P53784 Olfr59-201ENSMUST00000143976 3088 ntAPPRIS P1 TSL 3 BASIC3.81□□□□□ -1.8
Sox3P53784 Gm28154-201ENSMUST00000186267 4218 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
Sox3P53784 Cfh-203ENSMUST00000111977 4100 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
Sox3P53784 AI314180-203ENSMUST00000107557 4946 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
Sox3P53784 Gm37625-201ENSMUST00000194969 4872 ntBASIC3.81□□□□□ -1.8
Sox3P53784 2900092N22Rik-201ENSMUST00000193601 1409 ntBASIC3.81□□□□□ -1.8
Sox3P53784 Gpm6a-201ENSMUST00000033915 3215 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
Sox3P53784 Gm12586-201ENSMUST00000117328 1316 ntBASIC3.81□□□□□ -1.8
Sox3P53784 Ighv3-3-201ENSMUST00000103476 296 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
Sox3P53784 Gm25272-201ENSMUST00000104293 128 ntBASIC3.81□□□□□ -1.8
Sox3P53784 Gm26019-201ENSMUST00000104407 119 ntBASIC3.81□□□□□ -1.8
Sox3P53784 Gm17106-201ENSMUST00000105610 459 ntTSL 5 BASIC3.81□□□□□ -1.8
Sox3P53784 Gm12149-201ENSMUST00000117511 654 ntBASIC3.81□□□□□ -1.8
Sox3P53784 Gm12095-201ENSMUST00000121962 816 ntBASIC3.81□□□□□ -1.8
Sox3P53784 Crem-222ENSMUST00000144496 978 ntTSL 5 BASIC3.81□□□□□ -1.8
Sox3P53784 Crem-231ENSMUST00000152108 654 ntTSL 5 BASIC3.81□□□□□ -1.8
Sox3P53784 Gm26487-201ENSMUST00000158022 94 ntBASIC3.81□□□□□ -1.8
Sox3P53784 Gm23666-201ENSMUST00000158053 116 ntBASIC3.81□□□□□ -1.8
Sox3P53784 Vmn1r-ps19-201ENSMUST00000177008 926 ntBASIC3.81□□□□□ -1.8
Sox3P53784 Gm15143-201ENSMUST00000178180 714 ntBASIC3.81□□□□□ -1.8
Sox3P53784 Gm11983-202ENSMUST00000184940 318 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
Sox3P53784 Gm19503-201ENSMUST00000187109 241 ntBASIC3.81□□□□□ -1.8
Sox3P53784 Gm29053-201ENSMUST00000187484 370 ntTSL 5 BASIC3.81□□□□□ -1.8
Sox3P53784 Gm28550-201ENSMUST00000189125 618 ntTSL 5 BASIC3.81□□□□□ -1.8
Sox3P53784 1700121L16Rik-201ENSMUST00000189166 561 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
Sox3P53784 Gm28460-202ENSMUST00000190590 618 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
Sox3P53784 Gm29704-201ENSMUST00000196011 253 ntBASIC3.81□□□□□ -1.8
Sox3P53784 Igkv14-118-2-201ENSMUST00000198287 339 ntBASIC3.81□□□□□ -1.8
Sox3P53784 Igkv14-126-1-201ENSMUST00000199899 346 ntBASIC3.81□□□□□ -1.8
Sox3P53784 1700126H18Rik-201ENSMUST00000201903 405 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
Sox3P53784 Gm45034-201ENSMUST00000206831 482 ntBASIC3.81□□□□□ -1.8
Sox3P53784 Gm44656-201ENSMUST00000208428 490 ntBASIC3.81□□□□□ -1.8
Sox3P53784 Olfr566-202ENSMUST00000209952 1066 ntAPPRIS ALT1 TSL 3 BASIC3.81□□□□□ -1.8
Sox3P53784 Gm45533-201ENSMUST00000210295 165 ntTSL 5 BASIC3.81□□□□□ -1.8
Sox3P53784 2500002B13Rik-202ENSMUST00000210752 298 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
Sox3P53784 AC155923.1-201ENSMUST00000215676 356 ntBASIC3.81□□□□□ -1.8
Sox3P53784 Olfr790-204ENSMUST00000218901 1070 ntBASIC3.81□□□□□ -1.8
Sox3P53784 AC163354.1-207ENSMUST00000221270 1243 ntTSL 5 BASIC3.81□□□□□ -1.8
Sox3P53784 Olfr790-201ENSMUST00000056002 1070 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
Sox3P53784 Olfr566-201ENSMUST00000071393 951 ntAPPRIS P2 BASIC3.81□□□□□ -1.8
Sox3P53784 Gm26176-201ENSMUST00000083795 105 ntBASIC3.81□□□□□ -1.8
Sox3P53784 Tas2r115-201ENSMUST00000095394 1033 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
Sox3P53784 1700010D01Rik-201ENSMUST00000096366 507 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
Sox3P53784 AC140397.1-201ENSMUST00000225563 4562 ntBASIC3.81□□□□□ -1.8
Sox3P53784 A230057D06Rik-202ENSMUST00000207061 3717 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
Sox3P53784 Vmn2r32-201ENSMUST00000094866 3513 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
Sox3P53784 Gm14636-202ENSMUST00000150801 5060 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
Sox3P53784 Ugp2-202ENSMUST00000102875 2683 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
Sox3P53784 Olfr107-205ENSMUST00000216844 4021 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
Sox3P53784 AC153563.1-202ENSMUST00000217695 1838 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
Sox3P53784 Olfr815-202ENSMUST00000216182 2881 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
Sox3P53784 B230334C09Rik-201ENSMUST00000200255 8927 ntBASIC3.8□□□□□ -1.8
Sox3P53784 Olfr1016-202ENSMUST00000216425 2698 ntAPPRIS P1 TSL 3 BASIC3.8□□□□□ -1.8
Sox3P53784 Efhc2-201ENSMUST00000026014 2554 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Sox3P53784 Gm9495-201ENSMUST00000200846 2512 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Sox3P53784 Olfr1249-202ENSMUST00000216124 3047 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Sox3P53784 AC123858.1-201ENSMUST00000226948 1874 ntBASIC3.8□□□□□ -1.8
Sox3P53784 AC124346.2-201ENSMUST00000217986 5083 ntBASIC3.8□□□□□ -1.8
Sox3P53784 Erbb4-201ENSMUST00000119142 11782 ntAPPRIS ALT1 TSL 5 BASIC3.8□□□□□ -1.8
Sox3P53784 Mir147-201ENSMUST00000102354 79 ntBASIC3.8□□□□□ -1.8
Sox3P53784 Gm8666-201ENSMUST00000117517 292 ntBASIC3.8□□□□□ -1.8
Sox3P53784 Gm15180-201ENSMUST00000117745 492 ntBASIC3.8□□□□□ -1.8
Sox3P53784 Gm13677-201ENSMUST00000120739 595 ntBASIC3.8□□□□□ -1.8
Sox3P53784 Gm22718-201ENSMUST00000122701 315 ntBASIC3.8□□□□□ -1.8
Sox3P53784 6030471H07Rik-201ENSMUST00000125884 492 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Sox3P53784 Gm11579-201ENSMUST00000145502 845 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Sox3P53784 Gm22320-201ENSMUST00000157149 312 ntBASIC3.8□□□□□ -1.8
Sox3P53784 Mir1946a-201ENSMUST00000158360 134 ntBASIC3.8□□□□□ -1.8
Sox3P53784 Gm44501-201ENSMUST00000167713 1229 ntAPPRIS P1 TSL 2 BASIC3.8□□□□□ -1.8
Sox3P53784 Vmn1r-ps48-201ENSMUST00000176352 886 ntBASIC3.8□□□□□ -1.8
Sox3P53784 Gm21045-201ENSMUST00000183058 1020 ntBASIC3.8□□□□□ -1.8
Sox3P53784 Gm36964-201ENSMUST00000191876 198 ntBASIC3.8□□□□□ -1.8
Sox3P53784 Gm37853-201ENSMUST00000195748 660 ntTSL 3 BASIC3.8□□□□□ -1.8
Sox3P53784 Gm22897-201ENSMUST00000197860 128 ntBASIC3.8□□□□□ -1.8
Sox3P53784 Gm44023-201ENSMUST00000203710 469 ntBASIC3.8□□□□□ -1.8
Sox3P53784 A530053G22Rik-204ENSMUST00000204579 536 ntTSL 2 BASIC3.8□□□□□ -1.8
Sox3P53784 Gm45031-201ENSMUST00000206800 288 ntBASIC3.8□□□□□ -1.8
Sox3P53784 Gm7587-201ENSMUST00000207618 1021 ntBASIC3.8□□□□□ -1.8
Sox3P53784 Gm44681-201ENSMUST00000208447 842 ntBASIC3.8□□□□□ -1.8
Sox3P53784 Gm45553-201ENSMUST00000209929 507 ntBASIC3.8□□□□□ -1.8
Sox3P53784 Gm45245-201ENSMUST00000210082 376 ntBASIC3.8□□□□□ -1.8
Sox3P53784 Gm6929-201ENSMUST00000210930 468 ntBASIC3.8□□□□□ -1.8
Sox3P53784 Olfr589-202ENSMUST00000218483 966 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Sox3P53784 Gm17829-201ENSMUST00000219782 344 ntBASIC3.8□□□□□ -1.8
Sox3P53784 Ly6e-ps1-201ENSMUST00000222501 367 ntBASIC3.8□□□□□ -1.8
Sox3P53784 2900092C05Rik-201ENSMUST00000032541 887 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Sox3P53784 Vmn1r26-201ENSMUST00000049694 1020 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
Sox3P53784 Tas2r121-201ENSMUST00000095395 918 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
Sox3P53784 Skint3-201ENSMUST00000038455 3627 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
Sox3P53784 Olfr1012-203ENSMUST00000214958 3076 ntAPPRIS P1 TSL 3 BASIC3.8□□□□□ -1.8
Sox3P53784 Zfp990-201ENSMUST00000105741 3044 ntAPPRIS P1 TSL 3 BASIC3.8□□□□□ -1.8
Retrieved 100 of 76,532 protein–RNA pairs in 68.8 ms