Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Gm23231-201ENSMUST00000157299 104 ntBASIC3.42□□□□□ -1.86
Cdx1P18111 Gm24251-201ENSMUST00000157324 114 ntBASIC3.42□□□□□ -1.86
Cdx1P18111 Gm16107-201ENSMUST00000162523 862 ntBASIC3.42□□□□□ -1.86
Cdx1P18111 Gm25942-201ENSMUST00000180080 110 ntBASIC3.42□□□□□ -1.86
Cdx1P18111 Pnrc2-203ENSMUST00000180300 171 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
Cdx1P18111 Gm7656-201ENSMUST00000182468 1004 ntBASIC3.42□□□□□ -1.86
Cdx1P18111 Gm42982-201ENSMUST00000198574 687 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
Cdx1P18111 Gm34091-201ENSMUST00000200875 604 ntBASIC3.42□□□□□ -1.86
Cdx1P18111 Clec2g-205ENSMUST00000203405 967 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
Cdx1P18111 Gm6112-201ENSMUST00000208037 629 ntBASIC3.42□□□□□ -1.86
Cdx1P18111 Gm17989-201ENSMUST00000211543 412 ntBASIC3.42□□□□□ -1.86
Cdx1P18111 Gm7639-201ENSMUST00000212608 484 ntBASIC3.42□□□□□ -1.86
Cdx1P18111 Gm18016-201ENSMUST00000216119 801 ntBASIC3.42□□□□□ -1.86
Cdx1P18111 Gm8942-201ENSMUST00000217892 400 ntBASIC3.42□□□□□ -1.86
Cdx1P18111 AC122210.1-201ENSMUST00000217923 675 ntTSL 3 BASIC3.42□□□□□ -1.86
Cdx1P18111 CT025552.1-201ENSMUST00000224561 521 ntBASIC3.42□□□□□ -1.86
Cdx1P18111 AC119573.1-201ENSMUST00000227960 757 ntBASIC3.42□□□□□ -1.86
Cdx1P18111 Olfr1124-201ENSMUST00000062494 957 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
Cdx1P18111 Mir346-201ENSMUST00000083547 98 ntBASIC3.42□□□□□ -1.86
Cdx1P18111 Gm24031-201ENSMUST00000083930 131 ntBASIC3.42□□□□□ -1.86
Cdx1P18111 Gm22444-201ENSMUST00000093693 108 ntBASIC3.42□□□□□ -1.86
Cdx1P18111 Gm6043-201ENSMUST00000099961 492 ntBASIC3.42□□□□□ -1.86
Cdx1P18111 Klhl13-204ENSMUST00000115317 3216 ntAPPRIS ALT1 TSL 5 BASIC3.42□□□□□ -1.86
Cdx1P18111 AC153522.2-201ENSMUST00000218389 3853 ntBASIC3.42□□□□□ -1.86
Cdx1P18111 Olfr1188-202ENSMUST00000217131 1406 ntAPPRIS ALT2 TSL 3 BASIC3.42□□□□□ -1.86
Cdx1P18111 Gm13103-201ENSMUST00000094522 1833 ntAPPRIS P2 TSL 1 (best) BASIC3.42□□□□□ -1.86
Cdx1P18111 Olfr788-202ENSMUST00000213222 4747 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
Cdx1P18111 Gm28634-201ENSMUST00000191087 2613 ntBASIC3.41□□□□□ -1.86
Cdx1P18111 Gm12374-201ENSMUST00000147108 3299 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
Cdx1P18111 Vmn1r71-205ENSMUST00000227940 4725 ntAPPRIS P2 BASIC3.41□□□□□ -1.86
Cdx1P18111 Gm43829-201ENSMUST00000196191 3802 ntBASIC3.41□□□□□ -1.86
Cdx1P18111 Olfr1082-201ENSMUST00000215600 1620 ntAPPRIS P1 TSL 3 BASIC3.41□□□□□ -1.86
Cdx1P18111 Olfr836-203ENSMUST00000215981 5046 ntAPPRIS ALT2 TSL 5 BASIC3.41□□□□□ -1.86
Cdx1P18111 Gm20619-201ENSMUST00000175814 2008 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
Cdx1P18111 Gm37983-201ENSMUST00000193207 2006 ntBASIC3.41□□□□□ -1.86
Cdx1P18111 Usp34-208ENSMUST00000180046 12200 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
Cdx1P18111 Olfr131-202ENSMUST00000172933 1358 ntAPPRIS P1 TSL 3 BASIC3.41□□□□□ -1.86
Cdx1P18111 Ghr-208ENSMUST00000161561 2749 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
Cdx1P18111 Gm32444-201ENSMUST00000195147 3511 ntBASIC3.41□□□□□ -1.86
Cdx1P18111 Olfr714-203ENSMUST00000214429 4324 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
Cdx1P18111 Gm24273-201ENSMUST00000102332 164 ntBASIC3.41□□□□□ -1.86
Cdx1P18111 Trav10n-201ENSMUST00000103612 343 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
Cdx1P18111 Gm23014-201ENSMUST00000104144 130 ntBASIC3.41□□□□□ -1.86
Cdx1P18111 Gm24067-201ENSMUST00000104514 85 ntBASIC3.41□□□□□ -1.86
Cdx1P18111 Gm13733-201ENSMUST00000117290 535 ntBASIC3.41□□□□□ -1.86
Cdx1P18111 Gm14628-201ENSMUST00000117508 635 ntBASIC3.41□□□□□ -1.86
Cdx1P18111 Vmn1r-ps93-201ENSMUST00000117599 432 ntBASIC3.41□□□□□ -1.86
Cdx1P18111 Gm14933-201ENSMUST00000118840 481 ntBASIC3.41□□□□□ -1.86
Cdx1P18111 Gm11896-201ENSMUST00000121105 820 ntBASIC3.41□□□□□ -1.86
Cdx1P18111 Gm22208-201ENSMUST00000122658 110 ntBASIC3.41□□□□□ -1.86
Cdx1P18111 Gm24061-201ENSMUST00000157489 120 ntBASIC3.41□□□□□ -1.86
Cdx1P18111 Gm24734-201ENSMUST00000158860 262 ntBASIC3.41□□□□□ -1.86
Cdx1P18111 Gm23505-201ENSMUST00000158989 130 ntBASIC3.41□□□□□ -1.86
Cdx1P18111 Cst12-202ENSMUST00000168443 546 ntAPPRIS P2 TSL 1 (best) BASIC3.41□□□□□ -1.86
Cdx1P18111 Gm6155-201ENSMUST00000173735 341 ntBASIC3.41□□□□□ -1.86
Cdx1P18111 Gm22395-201ENSMUST00000177427 96 ntBASIC3.41□□□□□ -1.86
Cdx1P18111 Gm11007-201ENSMUST00000177700 195 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
Cdx1P18111 Gm2007-201ENSMUST00000177981 195 ntTSL 5 BASIC3.41□□□□□ -1.86
Cdx1P18111 Gm2004-203ENSMUST00000179349 195 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
Cdx1P18111 1700003C15Rik-201ENSMUST00000185360 1224 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
Cdx1P18111 2010005H15Rik-203ENSMUST00000187742 466 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
Cdx1P18111 Gm38356-201ENSMUST00000194313 408 ntBASIC3.41□□□□□ -1.86
Cdx1P18111 Vmn1r-ps7-201ENSMUST00000202355 928 ntBASIC3.41□□□□□ -1.86
Cdx1P18111 Gm45063-201ENSMUST00000203726 472 ntBASIC3.41□□□□□ -1.86
Cdx1P18111 Gm45209-201ENSMUST00000207122 353 ntBASIC3.41□□□□□ -1.86
Cdx1P18111 Gm18602-201ENSMUST00000209794 851 ntBASIC3.41□□□□□ -1.86
Cdx1P18111 Gm19885-201ENSMUST00000212853 343 ntBASIC3.41□□□□□ -1.86
Cdx1P18111 CT009765.2-201ENSMUST00000221331 392 ntBASIC3.41□□□□□ -1.86
Cdx1P18111 AC102435.1-201ENSMUST00000222199 908 ntTSL 5 BASIC3.41□□□□□ -1.86
Cdx1P18111 AC158523.2-201ENSMUST00000222708 548 ntBASIC3.41□□□□□ -1.86
Cdx1P18111 AC154730.1-201ENSMUST00000227874 816 ntBASIC3.41□□□□□ -1.86
Cdx1P18111 CT485608.1-201ENSMUST00000228759 389 ntBASIC3.41□□□□□ -1.86
Cdx1P18111 Muc16-201ENSMUST00000034653 1035 ntTSL 2 BASIC3.41□□□□□ -1.86
Cdx1P18111 Stfa1-201ENSMUST00000042097 418 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
Cdx1P18111 Gm9818-201ENSMUST00000050900 255 ntBASIC3.41□□□□□ -1.86
Cdx1P18111 Vmn1r72-201ENSMUST00000053134 921 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
Cdx1P18111 Olfr727-201ENSMUST00000079142 1035 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
Cdx1P18111 Olfr885-201ENSMUST00000081985 930 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
Cdx1P18111 Zfp426-213ENSMUST00000169558 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
Cdx1P18111 Gm29674-202ENSMUST00000219664 4083 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
Cdx1P18111 Gm43793-201ENSMUST00000201645 1333 ntBASIC3.41□□□□□ -1.86
Cdx1P18111 Olfr168-202ENSMUST00000213480 2205 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.86
Cdx1P18111 Skint11-204ENSMUST00000164297 1393 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
Cdx1P18111 Neto2-201ENSMUST00000109686 5610 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
Cdx1P18111 Gm22473-201ENSMUST00000104114 132 ntBASIC3.4□□□□□ -1.87
Cdx1P18111 Synj2bp-202ENSMUST00000114201 1121 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
Cdx1P18111 Gm8666-201ENSMUST00000117517 292 ntBASIC3.4□□□□□ -1.87
Cdx1P18111 Defa-ps15-201ENSMUST00000118178 477 ntBASIC3.4□□□□□ -1.87
Cdx1P18111 Gm12190-201ENSMUST00000120001 187 ntBASIC3.4□□□□□ -1.87
Cdx1P18111 2310057J18Rik-202ENSMUST00000140558 1445 ntTSL 5 BASIC3.4□□□□□ -1.87
Cdx1P18111 Gm24774-201ENSMUST00000157384 134 ntBASIC3.4□□□□□ -1.87
Cdx1P18111 Gm20428-201ENSMUST00000174365 283 ntBASIC3.4□□□□□ -1.87
Cdx1P18111 Gm7497-201ENSMUST00000183064 1003 ntBASIC3.4□□□□□ -1.87
Cdx1P18111 Gm26915-201ENSMUST00000183080 748 ntBASIC3.4□□□□□ -1.87
Cdx1P18111 Mir6960-201ENSMUST00000183449 61 ntBASIC3.4□□□□□ -1.87
Cdx1P18111 Gm27805-201ENSMUST00000184513 79 ntBASIC3.4□□□□□ -1.87
Cdx1P18111 Gm29563-201ENSMUST00000187249 496 ntBASIC3.4□□□□□ -1.87
Cdx1P18111 Gm38221-201ENSMUST00000195146 365 ntBASIC3.4□□□□□ -1.87
Cdx1P18111 Gm43704-201ENSMUST00000196164 496 ntBASIC3.4□□□□□ -1.87
Cdx1P18111 Gm43848-201ENSMUST00000198060 1247 ntBASIC3.4□□□□□ -1.87
Retrieved 100 of 76,532 protein–RNA pairs in 66.2 ms