Protein–RNA interactions for Protein: P11416

Rara, Retinoic acid receptor alpha, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RaraP11416 Gm25565-201ENSMUST00000104605 105 ntBASIC5.85□□□□□ -1.47
RaraP11416 Gm16205-201ENSMUST00000117720 1027 ntBASIC5.85□□□□□ -1.47
RaraP11416 Gm12413-201ENSMUST00000121508 312 ntBASIC5.85□□□□□ -1.47
RaraP11416 Gm15167-201ENSMUST00000121997 187 ntBASIC5.85□□□□□ -1.47
RaraP11416 Gm14129-201ENSMUST00000122436 291 ntBASIC5.85□□□□□ -1.47
RaraP11416 Gtsf1-202ENSMUST00000123724 747 ntTSL 5 BASIC5.85□□□□□ -1.47
RaraP11416 Gm14978-201ENSMUST00000129000 304 ntTSL 3 BASIC5.85□□□□□ -1.47
RaraP11416 Gm13411-201ENSMUST00000149429 414 ntTSL 2 BASIC5.85□□□□□ -1.47
RaraP11416 Gm14216-202ENSMUST00000155334 492 ntTSL 2 BASIC5.85□□□□□ -1.47
RaraP11416 Gm25339-201ENSMUST00000157458 232 ntBASIC5.85□□□□□ -1.47
RaraP11416 Gm15657-203ENSMUST00000163077 779 ntTSL 3 BASIC5.85□□□□□ -1.47
RaraP11416 Gm9294-201ENSMUST00000165198 789 ntBASIC5.85□□□□□ -1.47
RaraP11416 Vmn1r-ps65-201ENSMUST00000174235 951 ntBASIC5.85□□□□□ -1.47
RaraP11416 Esp4-201ENSMUST00000178498 553 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
RaraP11416 Gm26746-201ENSMUST00000181722 487 ntBASIC5.85□□□□□ -1.47
RaraP11416 Gm27653-201ENSMUST00000185037 136 ntBASIC5.85□□□□□ -1.47
RaraP11416 Gm18117-201ENSMUST00000187720 742 ntBASIC5.85□□□□□ -1.47
RaraP11416 1810006J02Rik-202ENSMUST00000191060 523 ntTSL 2 BASIC5.85□□□□□ -1.47
RaraP11416 Gm43574-201ENSMUST00000196226 809 ntTSL 3 BASIC5.85□□□□□ -1.47
RaraP11416 Gm43601-201ENSMUST00000196294 945 ntBASIC5.85□□□□□ -1.47
RaraP11416 Gm43804-201ENSMUST00000198280 456 ntBASIC5.85□□□□□ -1.47
RaraP11416 Gm43710-201ENSMUST00000199583 452 ntBASIC5.85□□□□□ -1.47
RaraP11416 Crs-ps-201ENSMUST00000203723 760 ntBASIC5.85□□□□□ -1.47
RaraP11416 Gm44307-201ENSMUST00000204466 764 ntBASIC5.85□□□□□ -1.47
RaraP11416 Gm9560-201ENSMUST00000205012 1201 ntBASIC5.85□□□□□ -1.47
RaraP11416 Gm38574-201ENSMUST00000211855 640 ntBASIC5.85□□□□□ -1.47
RaraP11416 Olfr1266-ps1-201ENSMUST00000214850 180 ntBASIC5.85□□□□□ -1.47
RaraP11416 AL669916.5-201ENSMUST00000214874 361 ntBASIC5.85□□□□□ -1.47
RaraP11416 CT010455.1-201ENSMUST00000218579 413 ntBASIC5.85□□□□□ -1.47
RaraP11416 Olfr655-201ENSMUST00000057385 927 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
RaraP11416 Amelx-201ENSMUST00000066112 802 ntAPPRIS P4 TSL 1 (best) BASIC5.85□□□□□ -1.47
RaraP11416 Magea3-201ENSMUST00000079867 963 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
RaraP11416 Rps24-ps2-201ENSMUST00000091375 395 ntBASIC5.85□□□□□ -1.47
RaraP11416 Wfdc17-201ENSMUST00000092836 533 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
RaraP11416 8430419K02Rik-201ENSMUST00000128654 1870 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
RaraP11416 Gm44078-201ENSMUST00000204652 2646 ntBASIC5.85□□□□□ -1.47
RaraP11416 Olfr55-204ENSMUST00000216633 4758 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
RaraP11416 Olfr1037-204ENSMUST00000216886 1755 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
RaraP11416 Pirb-201ENSMUST00000078451 3824 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
RaraP11416 Npsr1-201ENSMUST00000059650 3791 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
RaraP11416 Rsrc2-210ENSMUST00000182489 1665 ntTSL 5 BASIC5.85□□□□□ -1.47
RaraP11416 Olfr586-204ENSMUST00000215304 6169 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
RaraP11416 5430403G16Rik-201ENSMUST00000092720 3341 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
RaraP11416 LOC102637012-201ENSMUST00000217248 2562 ntBASIC5.84□□□□□ -1.47
RaraP11416 Adgrg2-203ENSMUST00000112401 4632 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
RaraP11416 Adgrg2-204ENSMUST00000112402 4641 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
RaraP11416 Adgrg2-205ENSMUST00000112404 4601 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
RaraP11416 Adgrg2-206ENSMUST00000112405 4634 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
RaraP11416 Olfr893-202ENSMUST00000211975 2924 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
RaraP11416 Gm13103-201ENSMUST00000094522 1833 ntAPPRIS P2 TSL 1 (best) BASIC5.84□□□□□ -1.47
RaraP11416 Olfr69-201ENSMUST00000106878 2829 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
RaraP11416 Gm5155-201ENSMUST00000072381 2841 ntBASIC5.84□□□□□ -1.47
RaraP11416 Igkv8-26-201ENSMUST00000103382 371 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
RaraP11416 Gm22194-201ENSMUST00000116869 95 ntBASIC5.84□□□□□ -1.47
RaraP11416 Gm5073-201ENSMUST00000118222 820 ntBASIC5.84□□□□□ -1.47
RaraP11416 Mrpl24-203ENSMUST00000121048 1234 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
RaraP11416 Gm14223-201ENSMUST00000146060 517 ntTSL 3 BASIC5.84□□□□□ -1.47
RaraP11416 4930511O05Rik-201ENSMUST00000155912 391 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
RaraP11416 Gm23115-201ENSMUST00000158480 108 ntBASIC5.84□□□□□ -1.47
RaraP11416 Gm23408-201ENSMUST00000158523 265 ntBASIC5.84□□□□□ -1.47
RaraP11416 Gm22940-201ENSMUST00000158560 155 ntBASIC5.84□□□□□ -1.47
RaraP11416 Vmn1r-ps31-201ENSMUST00000174112 238 ntBASIC5.84□□□□□ -1.47
RaraP11416 Gm22411-201ENSMUST00000175462 126 ntBASIC5.84□□□□□ -1.47
RaraP11416 Gm22002-201ENSMUST00000175622 125 ntBASIC5.84□□□□□ -1.47
RaraP11416 Gm21726-201ENSMUST00000179654 392 ntBASIC5.84□□□□□ -1.47
RaraP11416 Scgb2b17-202ENSMUST00000182640 420 ntAPPRIS ALT2 TSL 3 BASIC5.84□□□□□ -1.47
RaraP11416 Scgb2b17-203ENSMUST00000182673 434 ntAPPRIS P2 TSL 2 BASIC5.84□□□□□ -1.47
RaraP11416 Scgb2b15-201ENSMUST00000182975 434 ntAPPRIS P1 TSL 2 BASIC5.84□□□□□ -1.47
RaraP11416 Gm27385-201ENSMUST00000184747 104 ntBASIC5.84□□□□□ -1.47
RaraP11416 Gm4557-201ENSMUST00000185826 907 ntBASIC5.84□□□□□ -1.47
RaraP11416 Gm4526-201ENSMUST00000186039 920 ntBASIC5.84□□□□□ -1.47
RaraP11416 Gm28995-201ENSMUST00000186625 261 ntBASIC5.84□□□□□ -1.47
RaraP11416 Gm28785-201ENSMUST00000187478 379 ntBASIC5.84□□□□□ -1.47
RaraP11416 Gm8708-201ENSMUST00000188500 906 ntBASIC5.84□□□□□ -1.47
RaraP11416 Gm43144-201ENSMUST00000198256 485 ntBASIC5.84□□□□□ -1.47
RaraP11416 Gm19131-201ENSMUST00000203408 789 ntBASIC5.84□□□□□ -1.47
RaraP11416 Gm45173-201ENSMUST00000206819 305 ntBASIC5.84□□□□□ -1.47
RaraP11416 Gm34096-201ENSMUST00000211296 530 ntTSL 3 BASIC5.84□□□□□ -1.47
RaraP11416 CT025665.1-201ENSMUST00000215251 1199 ntBASIC5.84□□□□□ -1.47
RaraP11416 Gm20734-201ENSMUST00000216939 193 ntBASIC5.84□□□□□ -1.47
RaraP11416 Gm36367-201ENSMUST00000217623 1158 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
RaraP11416 Gm18507-201ENSMUST00000218855 525 ntBASIC5.84□□□□□ -1.47
RaraP11416 AC154556.1-201ENSMUST00000224587 885 ntBASIC5.84□□□□□ -1.47
RaraP11416 Gm23406-201ENSMUST00000082537 122 ntBASIC5.84□□□□□ -1.47
RaraP11416 Gm22126-201ENSMUST00000083244 142 ntBASIC5.84□□□□□ -1.47
RaraP11416 Gm25126-201ENSMUST00000083343 102 ntBASIC5.84□□□□□ -1.47
RaraP11416 Gm25579-201ENSMUST00000083407 106 ntBASIC5.84□□□□□ -1.47
RaraP11416 Mir19a-201ENSMUST00000083482 82 ntBASIC5.84□□□□□ -1.47
RaraP11416 Gm12845-201ENSMUST00000203629 1767 ntAPPRIS P5 TSL 5 BASIC5.84□□□□□ -1.47
RaraP11416 Dock11-202ENSMUST00000115264 1725 ntTSL 5 BASIC5.84□□□□□ -1.47
RaraP11416 A730004F24Rik-202ENSMUST00000195454 1704 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
RaraP11416 Samd3-202ENSMUST00000164660 2620 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
RaraP11416 Samd3-203ENSMUST00000218301 2620 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
RaraP11416 Tubal3-201ENSMUST00000021639 3096 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
RaraP11416 Cnot4-203ENSMUST00000114993 3473 ntAPPRIS P4 TSL 1 (best) BASIC5.84□□□□□ -1.47
RaraP11416 4732416N19Rik-201ENSMUST00000203932 3479 ntBASIC5.84□□□□□ -1.47
RaraP11416 Ttc39d-201ENSMUST00000053168 2022 ntAPPRIS P1 BASIC5.84□□□□□ -1.48
RaraP11416 Gm38403-201ENSMUST00000219032 2357 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
RaraP11416 Gm15679-201ENSMUST00000161244 1936 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
RaraP11416 P2ry12-203ENSMUST00000196583 2344 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 84.1 ms