Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 CT009713.6-201ENSMUST00000223615 294 ntBASIC3.46□□□□□ -1.85
Col6a3E9PWQ3 AC165080.4-201ENSMUST00000213591 9507 ntTSL 5 BASIC3.46□□□□□ -1.85
Col6a3E9PWQ3 Elavl4-206ENSMUST00000106601 3775 ntAPPRIS ALT1 TSL 5 BASIC3.46□□□□□ -1.85
Col6a3E9PWQ3 Gm26477-201ENSMUST00000122617 323 ntBASIC3.46□□□□□ -1.86
Col6a3E9PWQ3 Mir3076-201ENSMUST00000175415 60 ntBASIC3.46□□□□□ -1.86
Col6a3E9PWQ3 Mir3470b-201ENSMUST00000175563 126 ntBASIC3.46□□□□□ -1.86
Col6a3E9PWQ3 Gm27898-201ENSMUST00000183987 80 ntBASIC3.46□□□□□ -1.86
Col6a3E9PWQ3 Mir6401-201ENSMUST00000184499 109 ntBASIC3.46□□□□□ -1.86
Col6a3E9PWQ3 Gm29334-201ENSMUST00000190334 357 ntBASIC3.46□□□□□ -1.86
Col6a3E9PWQ3 Olfr1315-ps1-201ENSMUST00000207542 1230 ntAPPRIS P5 TSL 5 BASIC3.46□□□□□ -1.86
Col6a3E9PWQ3 Clca4c-ps-201ENSMUST00000098551 712 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
Col6a3E9PWQ3 Mef2c-202ENSMUST00000163888 6277 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
Col6a3E9PWQ3 A730009L09Rik-201ENSMUST00000209558 2512 ntAPPRIS P5 TSL 1 (best) BASIC3.46□□□□□ -1.86
Col6a3E9PWQ3 Gm37747-201ENSMUST00000193717 4003 ntBASIC3.46□□□□□ -1.86
Col6a3E9PWQ3 Olfr1428-202ENSMUST00000208391 1368 ntTSL 3 BASIC3.46□□□□□ -1.86
Col6a3E9PWQ3 Gm38284-201ENSMUST00000194803 4539 ntBASIC3.46□□□□□ -1.86
Col6a3E9PWQ3 Mir292-201ENSMUST00000104847 82 ntBASIC3.46□□□□□ -1.86
Col6a3E9PWQ3 Skint3-202ENSMUST00000170945 3843 ntAPPRIS ALT2 TSL 1 (best) BASIC3.46□□□□□ -1.86
Col6a3E9PWQ3 4930461G14Rik-201ENSMUST00000181967 843 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
Col6a3E9PWQ3 Trdn-202ENSMUST00000217779 1182 ntAPPRIS ALT2 TSL 1 (best) BASIC3.46□□□□□ -1.86
Col6a3E9PWQ3 Olfr273-201ENSMUST00000051520 1059 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
Col6a3E9PWQ3 Pcdh15-222ENSMUST00000147189 6806 ntAPPRIS ALT2 TSL 1 (best) BASIC3.46□□□□□ -1.86
Col6a3E9PWQ3 Cfap54-211ENSMUST00000212902 9516 ntAPPRIS P5 TSL 1 (best) BASIC3.46□□□□□ -1.86
Col6a3E9PWQ3 Cbll1-201ENSMUST00000064240 3937 ntAPPRIS ALT1 TSL 5 BASIC3.46□□□□□ -1.86
Col6a3E9PWQ3 Gm7697-201ENSMUST00000201500 2507 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
Col6a3E9PWQ3 Olfr1402-202ENSMUST00000199297 4051 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
Col6a3E9PWQ3 Lrrc37a-201ENSMUST00000153273 9647 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
Col6a3E9PWQ3 2610002M06Rik-201ENSMUST00000120722 5842 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
Col6a3E9PWQ3 Gm12722-201ENSMUST00000118507 493 ntBASIC3.45□□□□□ -1.86
Col6a3E9PWQ3 Gm16471-201ENSMUST00000121940 618 ntBASIC3.45□□□□□ -1.86
Col6a3E9PWQ3 Gm23115-201ENSMUST00000158480 108 ntBASIC3.45□□□□□ -1.86
Col6a3E9PWQ3 Trdn-207ENSMUST00000219931 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC3.45□□□□□ -1.86
Col6a3E9PWQ3 Zfp26-203ENSMUST00000159569 11276 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
Col6a3E9PWQ3 Gm9696-201ENSMUST00000094227 3050 ntTSL 2 BASIC3.45□□□□□ -1.86
Col6a3E9PWQ3 Olfr801-204ENSMUST00000216067 4014 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
Col6a3E9PWQ3 Olfr1323-202ENSMUST00000213463 3717 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
Col6a3E9PWQ3 Gm18944-201ENSMUST00000207672 643 ntBASIC3.45□□□□□ -1.86
Col6a3E9PWQ3 AC132344.1-201ENSMUST00000221289 376 ntTSL 3 BASIC3.45□□□□□ -1.86
Col6a3E9PWQ3 AC154738.4-201ENSMUST00000228310 414 ntBASIC3.45□□□□□ -1.86
Col6a3E9PWQ3 Psd3-201ENSMUST00000038959 11319 ntAPPRIS ALT2 TSL 5 BASIC3.45□□□□□ -1.86
Col6a3E9PWQ3 Psd3-205ENSMUST00000098696 11316 ntAPPRIS ALT2 TSL 1 (best) BASIC3.45□□□□□ -1.86
Col6a3E9PWQ3 Arl13a-201ENSMUST00000064476 1740 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
Col6a3E9PWQ3 Vmn1r184-202ENSMUST00000227230 7999 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
Col6a3E9PWQ3 Tbl1xr1-202ENSMUST00000192328 3323 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
Col6a3E9PWQ3 Gm8074-201ENSMUST00000095071 252 ntBASIC3.45□□□□□ -1.86
Col6a3E9PWQ3 Olfr910-201ENSMUST00000215122 1996 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
Col6a3E9PWQ3 Ear-ps10-201ENSMUST00000161871 460 ntBASIC3.44□□□□□ -1.86
Col6a3E9PWQ3 Gm20663-201ENSMUST00000176647 474 ntTSL 3 BASIC3.44□□□□□ -1.86
Col6a3E9PWQ3 Gm21893-201ENSMUST00000179119 397 ntBASIC3.44□□□□□ -1.86
Col6a3E9PWQ3 Mir7039-201ENSMUST00000183852 85 ntBASIC3.44□□□□□ -1.86
Col6a3E9PWQ3 Gm37989-201ENSMUST00000195202 803 ntBASIC3.44□□□□□ -1.86
Col6a3E9PWQ3 Gm31897-201ENSMUST00000205924 340 ntTSL 5 BASIC3.44□□□□□ -1.86
Col6a3E9PWQ3 Gm30790-201ENSMUST00000208256 958 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
Col6a3E9PWQ3 Gm18193-201ENSMUST00000210017 772 ntBASIC3.44□□□□□ -1.86
Col6a3E9PWQ3 Gm35326-201ENSMUST00000218234 1041 ntTSL 5 BASIC3.44□□□□□ -1.86
Col6a3E9PWQ3 Erv3-201ENSMUST00000040941 3378 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
Col6a3E9PWQ3 Bcl2a1c-201ENSMUST00000066460 444 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
Col6a3E9PWQ3 Txndc9-204ENSMUST00000193832 3472 ntTSL 2 BASIC3.44□□□□□ -1.86
Col6a3E9PWQ3 Olfr536-205ENSMUST00000215768 4231 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
Col6a3E9PWQ3 Ktn1-201ENSMUST00000022391 4484 ntAPPRIS P3 TSL 1 (best) BASIC3.44□□□□□ -1.86
Col6a3E9PWQ3 Gm38240-201ENSMUST00000195110 2487 ntBASIC3.44□□□□□ -1.86
Col6a3E9PWQ3 Olfr1383-202ENSMUST00000204706 4168 ntAPPRIS P1 TSL 3 BASIC3.44□□□□□ -1.86
Col6a3E9PWQ3 Gm4211-201ENSMUST00000181103 2220 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
Col6a3E9PWQ3 Gm13787-201ENSMUST00000120422 168 ntBASIC3.44□□□□□ -1.86
Col6a3E9PWQ3 Gm21842-201ENSMUST00000177552 498 ntBASIC3.44□□□□□ -1.86
Col6a3E9PWQ3 Gm21626-201ENSMUST00000177791 498 ntBASIC3.44□□□□□ -1.86
Col6a3E9PWQ3 Gm21562-201ENSMUST00000177888 498 ntBASIC3.44□□□□□ -1.86
Col6a3E9PWQ3 Gm21539-201ENSMUST00000177925 498 ntBASIC3.44□□□□□ -1.86
Col6a3E9PWQ3 Gm17469-201ENSMUST00000177942 498 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
Col6a3E9PWQ3 Gm17693-201ENSMUST00000178004 498 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
Col6a3E9PWQ3 Gm17361-201ENSMUST00000178121 498 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
Col6a3E9PWQ3 Gm17522-201ENSMUST00000178144 498 ntBASIC3.44□□□□□ -1.86
Col6a3E9PWQ3 Gm21599-201ENSMUST00000178249 498 ntBASIC3.44□□□□□ -1.86
Col6a3E9PWQ3 Gm21616-201ENSMUST00000178416 498 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
Col6a3E9PWQ3 Gm21914-201ENSMUST00000178452 498 ntBASIC3.44□□□□□ -1.86
Col6a3E9PWQ3 Gm17584-201ENSMUST00000178471 498 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
Col6a3E9PWQ3 Gm17467-201ENSMUST00000178553 468 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
Col6a3E9PWQ3 Gm21723-201ENSMUST00000178692 498 ntBASIC3.44□□□□□ -1.86
Col6a3E9PWQ3 Gm21916-201ENSMUST00000178771 498 ntBASIC3.44□□□□□ -1.86
Col6a3E9PWQ3 Gm21801-201ENSMUST00000178865 498 ntBASIC3.44□□□□□ -1.86
Col6a3E9PWQ3 Gm21633-201ENSMUST00000178941 498 ntBASIC3.44□□□□□ -1.86
Col6a3E9PWQ3 Gm17267-201ENSMUST00000178952 499 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
Col6a3E9PWQ3 Gm17412-201ENSMUST00000179261 468 ntBASIC3.44□□□□□ -1.86
Col6a3E9PWQ3 Gm21821-201ENSMUST00000179646 498 ntBASIC3.44□□□□□ -1.86
Col6a3E9PWQ3 Gm17577-201ENSMUST00000179916 468 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
Col6a3E9PWQ3 Gm21588-201ENSMUST00000180074 498 ntBASIC3.44□□□□□ -1.86
Col6a3E9PWQ3 Gm21780-201ENSMUST00000180128 498 ntBASIC3.44□□□□□ -1.86
Col6a3E9PWQ3 Gm21572-201ENSMUST00000180134 498 ntBASIC3.44□□□□□ -1.86
Col6a3E9PWQ3 Gm21529-201ENSMUST00000180175 498 ntBASIC3.44□□□□□ -1.86
Col6a3E9PWQ3 Gm29370-202ENSMUST00000187476 499 ntBASIC3.44□□□□□ -1.86
Col6a3E9PWQ3 Gm37866-201ENSMUST00000191950 696 ntBASIC3.44□□□□□ -1.86
Col6a3E9PWQ3 Gm38326-201ENSMUST00000194030 686 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
Col6a3E9PWQ3 Serpinb3d-201ENSMUST00000023861 1216 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
Col6a3E9PWQ3 Gm25818-201ENSMUST00000083282 164 ntBASIC3.44□□□□□ -1.86
Col6a3E9PWQ3 Elavl4-202ENSMUST00000102723 4024 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
Col6a3E9PWQ3 Frmpd4-202ENSMUST00000112146 8153 ntAPPRIS ALT2 TSL 1 (best) BASIC3.44□□□□□ -1.86
Col6a3E9PWQ3 Gm37970-201ENSMUST00000193865 1732 ntBASIC3.44□□□□□ -1.86
Col6a3E9PWQ3 Tnpo1-201ENSMUST00000109399 8445 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
Col6a3E9PWQ3 Vmn1r202-202ENSMUST00000228020 5441 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
Col6a3E9PWQ3 Ikzf2-201ENSMUST00000027146 9278 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
Retrieved 100 of 76,532 protein–RNA pairs in 133.6 ms